RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 TTLL12Q14166 644 aaPredicted RBP9.83□□□□□ -0.84
RAB3IP-213ENST00000550647 GIGYF2Q6Y7W6 1299 aaKnown RBP9.83□□□□□ -0.84
RAB3IP-213ENST00000550647 NPDC1Q9NQX5 325 aaPredicted RBP9.83□□□□□ -0.84
RAB3IP-213ENST00000550647 OTUD5Q96G74 571 aa9.82□□□□□ -0.84
RAB3IP-213ENST00000550647 POTEJP0CG39 1038 aa9.8□□□□□ -0.84
RAB3IP-213ENST00000550647 MS4A1P11836 297 aa9.8□□□□□ -0.84
RAB3IP-213ENST00000550647 CLCN1P35523 988 aa9.79□□□□□ -0.84
RAB3IP-213ENST00000550647 REPIN1Q9BWE0 567 aaKnown RBP9.79□□□□□ -0.84
RAB3IP-213ENST00000550647 SH3D19Q5HYK7 790 aa9.78□□□□□ -0.84
RAB3IP-213ENST00000550647 CDHR5Q9HBB8 845 aa9.78□□□□□ -0.84
RAB3IP-213ENST00000550647 C3orf67Q6ZVT6 689 aa9.77□□□□□ -0.85
RAB3IP-213ENST00000550647 KDM4FA0A1W2PPD8 638 aa9.76□□□□□ -0.85
RAB3IP-213ENST00000550647 SLAIN1Q8ND83 568 aa9.76□□□□□ -0.85
RAB3IP-213ENST00000550647 FBXW7Q969H0 707 aa9.76□□□□□ -0.85
RAB3IP-213ENST00000550647 PCMTD1Q96MG8 357 aaPredicted RBP9.76□□□□□ -0.85
RAB3IP-213ENST00000550647 GPCPD1Q9NPB8 672 aa9.76□□□□□ -0.85
RAB3IP-213ENST00000550647 TYW1BQ6NUM6 668 aa9.75□□□□□ -0.85
RAB3IP-213ENST00000550647 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.75□□□□□ -0.85
RAB3IP-213ENST00000550647 PCDHGA10Q9Y5H3 936 aa9.75□□□□□ -0.85
RAB3IP-213ENST00000550647 A6NJR5 290 aa9.74□□□□□ -0.85
RAB3IP-213ENST00000550647 MAP3K7O43318 606 aa9.73□□□□□ -0.85
RAB3IP-213ENST00000550647 CERKQ8TCT0 537 aa9.73□□□□□ -0.85
RAB3IP-213ENST00000550647 JPH4Q96JJ6 628 aa9.73□□□□□ -0.85
RAB3IP-213ENST00000550647 C1orf115Q9H7X2 142 aa9.72□□□□□ -0.85
RAB3IP-213ENST00000550647 RBM27Q9P2N5 1060 aaKnown RBP9.72□□□□□ -0.85
RAB3IP-213ENST00000550647 SKIV2LQ15477 1246 aaKnown RBP9.71□□□□□ -0.86
RAB3IP-213ENST00000550647 PHOX2BQ99453 314 aa9.71□□□□□ -0.86
RAB3IP-213ENST00000550647 PCDHGA4Q9Y5G9 962 aa9.71□□□□□ -0.86
RAB3IP-213ENST00000550647 OATP04181 439 aa9.7□□□□□ -0.86
RAB3IP-213ENST00000550647 UBTFP17480 764 aaKnown RBP9.69□□□□□ -0.86
RAB3IP-213ENST00000550647 SSTR3P32745 418 aaPredicted RBP9.69□□□□□ -0.86
RAB3IP-213ENST00000550647 MDM2Q00987 491 aaPredicted RBP9.69□□□□□ -0.86
RAB3IP-213ENST00000550647 TSR1Q2NL82 804 aaKnown RBP9.69□□□□□ -0.86
RAB3IP-213ENST00000550647 METTL3Q86U44 580 aaKnown RBP9.69□□□□□ -0.86
RAB3IP-213ENST00000550647 TTC13Q8NBP0 860 aa9.69□□□□□ -0.86
RAB3IP-213ENST00000550647 FAM217BQ9NTX9 383 aaPredicted RBP9.69□□□□□ -0.86
RAB3IP-213ENST00000550647 FOSBP53539 338 aa9.68□□□□□ -0.86
RAB3IP-213ENST00000550647 MCM6Q14566 821 aa9.67□□□□□ -0.86
RAB3IP-213ENST00000550647 PXYLP1Q8TE99 480 aa9.66□□□□□ -0.86
RAB3IP-213ENST00000550647 RBM33Q96EV2 1170 aaKnown RBP9.66□□□□□ -0.86
RAB3IP-213ENST00000550647 ADGRG1Q9Y653 693 aa9.65□□□□□ -0.86
RAB3IP-213ENST00000550647 BEGAINQ9BUH8 593 aa9.64□□□□□ -0.87
RAB3IP-213ENST00000550647 SNPHO15079 494 aa9.63□□□□□ -0.87
RAB3IP-213ENST00000550647 TRAK2O60296 914 aa9.63□□□□□ -0.87
RAB3IP-213ENST00000550647 C6orf132Q5T0Z8 1188 aa9.63□□□□□ -0.87
RAB3IP-213ENST00000550647 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.63□□□□□ -0.87
RAB3IP-213ENST00000550647 PADI6Q6TGC4 694 aa9.62□□□□□ -0.87
RAB3IP-213ENST00000550647 APBB1O00213 710 aa9.61□□□□□ -0.87
RAB3IP-213ENST00000550647 DIXDC1Q155Q3 683 aa9.61□□□□□ -0.87
RAB3IP-213ENST00000550647 ZDHHC16Q969W1 377 aa9.61□□□□□ -0.87
RAB3IP-213ENST00000550647 CLUAP1Q96AJ1 413 aa9.6□□□□□ -0.87
RAB3IP-213ENST00000550647 MYSM1Q5VVJ2 828 aa9.59□□□□□ -0.87
RAB3IP-213ENST00000550647 SPDYE5A6NIY4 337 aa9.58□□□□□ -0.88
RAB3IP-213ENST00000550647 BANK1Q8NDB2 785 aa9.58□□□□□ -0.88
RAB3IP-213ENST00000550647 ZSWIM6Q9HCJ5 1215 aa9.58□□□□□ -0.88
RAB3IP-213ENST00000550647 PRSS12P56730 875 aa9.57□□□□□ -0.88
RAB3IP-213ENST00000550647 TUSC1Q2TAM9 212 aa9.57□□□□□ -0.88
RAB3IP-213ENST00000550647 FNBP4Q8N3X1 1017 aaPredicted RBP9.57□□□□□ -0.88
RAB3IP-213ENST00000550647 PROCA1Q8NCQ7 364 aaPredicted RBP9.57□□□□□ -0.88
RAB3IP-213ENST00000550647 ARID3CA6NKF2 412 aa9.56□□□□□ -0.88
RAB3IP-213ENST00000550647 CLK2P49760 499 aaKnown RBP9.56□□□□□ -0.88
RAB3IP-213ENST00000550647 FAM161AQ3B820 660 aa9.56□□□□□ -0.88
RAB3IP-213ENST00000550647 PPP2R2DQ66LE6 453 aa9.56□□□□□ -0.88
RAB3IP-213ENST00000550647 RBM46Q8TBY0 533 aaKnown RBP9.56□□□□□ -0.88
RAB3IP-213ENST00000550647 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.55□□□□□ -0.88
RAB3IP-213ENST00000550647 SOCS7O14512 581 aa9.55□□□□□ -0.88
RAB3IP-213ENST00000550647 PROSER2Q86WR7 435 aaPredicted RBP9.55□□□□□ -0.88
RAB3IP-213ENST00000550647 ZNF454Q8N9F8 522 aa9.55□□□□□ -0.88
RAB3IP-213ENST00000550647 ADAM33Q9BZ11 813 aa9.55□□□□□ -0.88
RAB3IP-213ENST00000550647 DOK7Q18PE1 504 aa9.54□□□□□ -0.88
RAB3IP-213ENST00000550647 FAM163AQ96GL9 167 aaPredicted RBP9.54□□□□□ -0.88
RAB3IP-213ENST00000550647 ARID3AQ99856 593 aa9.54□□□□□ -0.88
RAB3IP-213ENST00000550647 CDCA7LQ96GN5 454 aa9.53□□□□□ -0.88
RAB3IP-213ENST00000550647 TBC1D2Q9BYX2 928 aa9.53□□□□□ -0.88
RAB3IP-213ENST00000550647 POLR3EQ9NVU0 708 aa9.53□□□□□ -0.88
RAB3IP-213ENST00000550647 HOXB3P14651 431 aaPredicted RBP9.52□□□□□ -0.89
RAB3IP-213ENST00000550647 CCDC82Q8N4S0 544 aa9.52□□□□□ -0.89
RAB3IP-213ENST00000550647 NLRP7Q8WX94 980 aa9.52□□□□□ -0.89
RAB3IP-213ENST00000550647 RFC5P40937 340 aa9.51□□□□□ -0.89
RAB3IP-213ENST00000550647 TMEM259Q4ZIN3 620 aa9.51□□□□□ -0.89
RAB3IP-213ENST00000550647 GPR153Q6NV75 609 aa9.51□□□□□ -0.89
RAB3IP-213ENST00000550647 EYA1Q99502 592 aa9.51□□□□□ -0.89
RAB3IP-213ENST00000550647 RAD21O60216 631 aa9.5□□□□□ -0.89
RAB3IP-213ENST00000550647 CD46P15529 392 aa9.5□□□□□ -0.89
RAB3IP-213ENST00000550647 GJA5P36382 358 aa9.5□□□□□ -0.89
RAB3IP-213ENST00000550647 PODXL2Q9NZ53 605 aa9.5□□□□□ -0.89
RAB3IP-213ENST00000550647 PSDA5PKW4 1024 aaPredicted RBP9.49□□□□□ -0.89
RAB3IP-213ENST00000550647 RIMBP2O15034 1052 aa9.49□□□□□ -0.89
RAB3IP-213ENST00000550647 NUDT7P0C024 238 aa9.49□□□□□ -0.89
RAB3IP-213ENST00000550647 BCL2L12Q9HB09 334 aa9.49□□□□□ -0.89
RAB3IP-213ENST00000550647 FAM198AQ9UFP1 575 aa9.49□□□□□ -0.89
RAB3IP-213ENST00000550647 COG6Q9Y2V7 657 aa9.49□□□□□ -0.89
RAB3IP-213ENST00000550647 SPTLC1O15269 473 aa9.48□□□□□ -0.89
RAB3IP-213ENST00000550647 POM121Q96HA1 1249 aa9.48□□□□□ -0.89
RAB3IP-213ENST00000550647 RCCD1A6NED2 376 aa9.47□□□□□ -0.89
RAB3IP-213ENST00000550647 ARSIQ5FYB1 569 aa9.47□□□□□ -0.89
RAB3IP-213ENST00000550647 SULF1Q8IWU6 871 aa9.47□□□□□ -0.89
RAB3IP-213ENST00000550647 SPIRE2Q8WWL2 714 aa9.47□□□□□ -0.89
RAB3IP-213ENST00000550647 LIMD1Q9UGP4 676 aa9.47□□□□□ -0.89
RAB3IP-213ENST00000550647 PPP1R3GB7ZBB8 358 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms