RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 TRIM26Q12899 539 aaPredicted RBP19.69■□□□□ 0.74
RAB5C-206ENST00000550406 DEPDC5O75140 1603 aa19.69■□□□□ 0.74
RAB5C-206ENST00000550406 MADDQ8WXG6 1647 aa19.68■□□□□ 0.74
RAB5C-206ENST00000550406 FER1L4A9Z1Z3 1794 aa19.67■□□□□ 0.74
RAB5C-206ENST00000550406 GGT6Q6P531 493 aa19.67■□□□□ 0.74
RAB5C-206ENST00000550406 RIMS1Q86UR5 1692 aaKnown RBP19.64■□□□□ 0.73
RAB5C-206ENST00000550406 CLTCQ00610 1675 aaKnown RBP19.63■□□□□ 0.73
RAB5C-206ENST00000550406 UNC13BO14795 1591 aa19.63■□□□□ 0.73
RAB5C-206ENST00000550406 CEP152O94986 1710 aa19.62■□□□□ 0.73
RAB5C-206ENST00000550406 PRDM15P57071 1507 aaPredicted RBP19.62■□□□□ 0.73
RAB5C-206ENST00000550406 VWDEQ8N2E2 1590 aa19.61■□□□□ 0.73
RAB5C-206ENST00000550406 SETD5Q9C0A6 1442 aa19.61■□□□□ 0.73
RAB5C-206ENST00000550406 PPP6R1Q9UPN7 881 aa19.6■□□□□ 0.73
RAB5C-206ENST00000550406 KDM5DQ9BY66 1539 aa19.6■□□□□ 0.73
RAB5C-206ENST00000550406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.59■□□□□ 0.73
RAB5C-206ENST00000550406 ABCC3O15438 1527 aa19.58■□□□□ 0.73
RAB5C-206ENST00000550406 MROH2AA6NES4 1674 aa19.57■□□□□ 0.72
RAB5C-206ENST00000550406 ZC3H13Q5T200 1668 aaKnown RBP19.57■□□□□ 0.72
RAB5C-206ENST00000550406 C3P01024 1663 aa19.56■□□□□ 0.72
RAB5C-206ENST00000550406 RAB3GAP2Q9H2M9 1393 aa19.56■□□□□ 0.72
RAB5C-206ENST00000550406 FAM135AQ9P2D6 1515 aa19.56■□□□□ 0.72
RAB5C-206ENST00000550406 IQGAP3Q86VI3 1631 aa19.55■□□□□ 0.72
RAB5C-206ENST00000550406 PTPRMP28827 1452 aa19.54■□□□□ 0.72
RAB5C-206ENST00000550406 WASHC2CQ9Y4E1 1318 aa19.54■□□□□ 0.72
RAB5C-206ENST00000550406 CFAP65Q6ZU64 1925 aaKnown RBP19.54■□□□□ 0.72
RAB5C-206ENST00000550406 CAMSAP1Q5T5Y3 1602 aa19.54■□□□□ 0.72
RAB5C-206ENST00000550406 CNTLNQ9NXG0 1405 aa19.53■□□□□ 0.72
RAB5C-206ENST00000550406 LMTK2Q8IWU2 1503 aa19.53■□□□□ 0.72
RAB5C-206ENST00000550406 CEBPAP49715 358 aaPredicted RBP19.52■□□□□ 0.72
RAB5C-206ENST00000550406 NUP155O75694 1391 aa19.52■□□□□ 0.72
RAB5C-206ENST00000550406 ZMYM3Q14202 1370 aa19.52■□□□□ 0.72
RAB5C-206ENST00000550406 ESF1Q9H501 851 aaKnown RBP19.51■□□□□ 0.71
RAB5C-206ENST00000550406 KANK1Q14678 1352 aa19.51■□□□□ 0.71
RAB5C-206ENST00000550406 TET3O43151 1660 aa19.5■□□□□ 0.71
RAB5C-206ENST00000550406 PZPP20742 1482 aa19.49■□□□□ 0.71
RAB5C-206ENST00000550406 HRCP23327 699 aa19.49■□□□□ 0.71
RAB5C-206ENST00000550406 TRIM52Q96A61 297 aa19.48■□□□□ 0.71
RAB5C-206ENST00000550406 PCGF6Q9BYE7 350 aa19.48■□□□□ 0.71
RAB5C-206ENST00000550406 E9PCH4 1651 aa19.48■□□□□ 0.71
RAB5C-206ENST00000550406 EFCAB6Q5THR3 1501 aa19.47■□□□□ 0.71
RAB5C-206ENST00000550406 ARHGAP31Q2M1Z3 1444 aa19.46■□□□□ 0.71
RAB5C-206ENST00000550406 PLPPR3Q6T4P5 718 aa19.46■□□□□ 0.71
RAB5C-206ENST00000550406 NPATQ14207 1427 aa19.44■□□□□ 0.7
RAB5C-206ENST00000550406 PREX1Q8TCU6 1659 aa19.44■□□□□ 0.7
RAB5C-206ENST00000550406 FBXO31Q5XUX0 539 aaPredicted RBP19.44■□□□□ 0.7
RAB5C-206ENST00000550406 SETD1BQ9UPS6 1966 aaKnown RBP19.43■□□□□ 0.7
RAB5C-206ENST00000550406 MPHOSPH9Q99550 1183 aa19.4■□□□□ 0.7
RAB5C-206ENST00000550406 ACIN1Q9UKV3 1341 aaKnown RBP19.4■□□□□ 0.7
RAB5C-206ENST00000550406 SPATA31D1Q6ZQQ2 1576 aa19.4■□□□□ 0.7
RAB5C-206ENST00000550406 SLC4A1APQ9BWU0 796 aaKnown RBP19.39■□□□□ 0.69
RAB5C-206ENST00000550406 ERVK-7P63135 1459 aa19.39■□□□□ 0.69
RAB5C-206ENST00000550406 RPRD2Q5VT52 1461 aaKnown RBP19.38■□□□□ 0.69
RAB5C-206ENST00000550406 NOS1P29475 1434 aa19.37■□□□□ 0.69
RAB5C-206ENST00000550406 PKD2Q13563 968 aa19.37■□□□□ 0.69
RAB5C-206ENST00000550406 SYNMO15061 1565 aa19.36■□□□□ 0.69
RAB5C-206ENST00000550406 SPHKAPQ2M3C7 1700 aa19.36■□□□□ 0.69
RAB5C-206ENST00000550406 FOXD1Q16676 465 aa19.35■□□□□ 0.69
RAB5C-206ENST00000550406 TNRQ92752 1358 aa19.33■□□□□ 0.69
RAB5C-206ENST00000550406 PLA2R1Q13018 1463 aa19.33■□□□□ 0.68
RAB5C-206ENST00000550406 PTPRTO14522 1441 aa19.33■□□□□ 0.68
RAB5C-206ENST00000550406 MYO3AQ8NEV4 1616 aa19.33■□□□□ 0.68
RAB5C-206ENST00000550406 PIK3C2BO00750 1634 aa19.3■□□□□ 0.68
RAB5C-206ENST00000550406 UGGT1Q9NYU2 1555 aa19.3■□□□□ 0.68
RAB5C-206ENST00000550406 ZNF142P52746 1687 aaPredicted RBP19.28■□□□□ 0.68
RAB5C-206ENST00000550406 CLTCL1P53675 1640 aa19.27■□□□□ 0.68
RAB5C-206ENST00000550406 IDI1Q13907 227 aa19.27■□□□□ 0.68
RAB5C-206ENST00000550406 MYO5BQ9ULV0 1848 aa19.27■□□□□ 0.68
RAB5C-206ENST00000550406 TRPM2O94759 1503 aa19.26■□□□□ 0.67
RAB5C-206ENST00000550406 DHX57Q6P158 1386 aaKnown RBP19.26■□□□□ 0.67
RAB5C-206ENST00000550406 LMTK3Q96Q04 1460 aa19.26■□□□□ 0.67
RAB5C-206ENST00000550406 CEP170BQ9Y4F5 1589 aaPredicted RBP19.26■□□□□ 0.67
RAB5C-206ENST00000550406 A2ML1A8K2U0 1454 aa19.25■□□□□ 0.67
RAB5C-206ENST00000550406 NLRP1Q9C000 1473 aa19.25■□□□□ 0.67
RAB5C-206ENST00000550406 UBR1Q8IWV7 1749 aa19.25■□□□□ 0.67
RAB5C-206ENST00000550406 UHRF1BP1Q6BDS2 1440 aa19.25■□□□□ 0.67
RAB5C-206ENST00000550406 ANKRD30BQ9BXX2 1392 aa19.23■□□□□ 0.67
RAB5C-206ENST00000550406 SLC52A1Q9NWF4 448 aa19.23■□□□□ 0.67
RAB5C-206ENST00000550406 KIF1BO60333 1816 aa19.21■□□□□ 0.67
RAB5C-206ENST00000550406 TMEM131LA2VDJ0 1609 aa19.21■□□□□ 0.67
RAB5C-206ENST00000550406 KDM5AP29375 1690 aaKnown RBP19.2■□□□□ 0.66
RAB5C-206ENST00000550406 HSPA2P54652 639 aa19.18■□□□□ 0.66
RAB5C-206ENST00000550406 ADGRB3O60242 1522 aa19.18■□□□□ 0.66
RAB5C-206ENST00000550406 ILDR1Q86SU0 546 aaPredicted RBP19.16■□□□□ 0.66
RAB5C-206ENST00000550406 CCDC144AA2RUR9 1427 aa19.14■□□□□ 0.65
RAB5C-206ENST00000550406 STRCQ7RTU9 1775 aa19.14■□□□□ 0.65
RAB5C-206ENST00000550406 ARHGAP23Q9P227 1491 aa19.12■□□□□ 0.65
RAB5C-206ENST00000550406 CHGAP10645 457 aaKnown RBP19.12■□□□□ 0.65
RAB5C-206ENST00000550406 THEMISQ8N1K5 641 aaPredicted RBP19.12■□□□□ 0.65
RAB5C-206ENST00000550406 SPATA31E1Q6ZUB1 1445 aa19.11■□□□□ 0.65
RAB5C-206ENST00000550406 SLIT1O75093 1534 aa19.1■□□□□ 0.65
RAB5C-206ENST00000550406 SIN3AQ96ST3 1273 aa19.1■□□□□ 0.65
RAB5C-206ENST00000550406 STAG3Q9UJ98 1225 aa19.1■□□□□ 0.65
RAB5C-206ENST00000550406 NEURL4Q96JN8 1562 aa19.09■□□□□ 0.65
RAB5C-206ENST00000550406 TMEM2Q9UHN6 1383 aa19.08■□□□□ 0.65
RAB5C-206ENST00000550406 POLR1AO95602 1720 aaPredicted RBP19.08■□□□□ 0.64
RAB5C-206ENST00000550406 ZFYVE9O95405 1425 aa19.08■□□□□ 0.64
RAB5C-206ENST00000550406 PPLO60437 1756 aa19.07■□□□□ 0.64
RAB5C-206ENST00000550406 LTKP29376 864 aa19.07■□□□□ 0.64
RAB5C-206ENST00000550406 IFT172Q9UG01 1749 aa19.07■□□□□ 0.64
RAB5C-206ENST00000550406 NEXMIFQ5QGS0 1516 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms