RNA–Protein interactions for RNA: ENST00000550339.1

NR4A1-214, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 500 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-214ENST00000550339 GCC2Q8IWJ2 1684 aa17.88■□□□□ 0.45
NR4A1-214ENST00000550339 ERBINQ96RT1 1412 aa17.88■□□□□ 0.45
NR4A1-214ENST00000550339 GGT6Q6P531 493 aa17.87■□□□□ 0.45
NR4A1-214ENST00000550339 SETD5Q9C0A6 1442 aa17.86■□□□□ 0.45
NR4A1-214ENST00000550339 AGLP35573 1532 aa17.85■□□□□ 0.45
NR4A1-214ENST00000550339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.85■□□□□ 0.45
NR4A1-214ENST00000550339 EIF2AK4Q9P2K8 1649 aaKnown RBP17.83■□□□□ 0.45
NR4A1-214ENST00000550339 RAB3GAP2Q9H2M9 1393 aa17.81■□□□□ 0.44
NR4A1-214ENST00000550339 TRIM52Q96A61 297 aa17.81■□□□□ 0.44
NR4A1-214ENST00000550339 BCORL1Q5H9F3 1711 aa17.8■□□□□ 0.44
NR4A1-214ENST00000550339 ESF1Q9H501 851 aaKnown RBP17.78■□□□□ 0.44
NR4A1-214ENST00000550339 RNF17Q9BXT8 1623 aaKnown RBP17.78■□□□□ 0.44
NR4A1-214ENST00000550339 NUP155O75694 1391 aa17.76■□□□□ 0.43
NR4A1-214ENST00000550339 KANK1Q14678 1352 aa17.76■□□□□ 0.43
NR4A1-214ENST00000550339 MROH1Q8NDA8 1641 aa17.76■□□□□ 0.43
NR4A1-214ENST00000550339 WASHC2CQ9Y4E1 1318 aa17.75■□□□□ 0.43
NR4A1-214ENST00000550339 MSH5O43196 834 aa17.75■□□□□ 0.43
NR4A1-214ENST00000550339 DEPDC5O75140 1603 aa17.75■□□□□ 0.43
NR4A1-214ENST00000550339 UNC13BO14795 1591 aa17.74■□□□□ 0.43
NR4A1-214ENST00000550339 PRDM15P57071 1507 aaPredicted RBP17.73■□□□□ 0.43
NR4A1-214ENST00000550339 FER1L4A9Z1Z3 1794 aa17.72■□□□□ 0.43
NR4A1-214ENST00000550339 CEP152O94986 1710 aa17.72■□□□□ 0.43
NR4A1-214ENST00000550339 MADDQ8WXG6 1647 aa17.72■□□□□ 0.43
NR4A1-214ENST00000550339 ADAMTSL3P82987 1691 aa17.71■□□□□ 0.43
NR4A1-214ENST00000550339 CLTCQ00610 1675 aaKnown RBP17.71■□□□□ 0.43
NR4A1-214ENST00000550339 HRCP23327 699 aa17.7■□□□□ 0.42
NR4A1-214ENST00000550339 KDM5DQ9BY66 1539 aa17.7■□□□□ 0.42
NR4A1-214ENST00000550339 ABCC3O15438 1527 aa17.69■□□□□ 0.42
NR4A1-214ENST00000550339 RIMS1Q86UR5 1692 aaKnown RBP17.69■□□□□ 0.42
NR4A1-214ENST00000550339 KDM4FA0A1W2PPD8 638 aa17.69■□□□□ 0.42
NR4A1-214ENST00000550339 FAM135AQ9P2D6 1515 aa17.68■□□□□ 0.42
NR4A1-214ENST00000550339 VWDEQ8N2E2 1590 aa17.68■□□□□ 0.42
NR4A1-214ENST00000550339 SLC4A1APQ9BWU0 796 aaKnown RBP17.68■□□□□ 0.42
NR4A1-214ENST00000550339 IQGAP3Q86VI3 1631 aa17.68■□□□□ 0.42
NR4A1-214ENST00000550339 ACIN1Q9UKV3 1341 aaKnown RBP17.68■□□□□ 0.42
NR4A1-214ENST00000550339 ZC3H13Q5T200 1668 aaKnown RBP17.67■□□□□ 0.42
NR4A1-214ENST00000550339 CNTLNQ9NXG0 1405 aa17.66■□□□□ 0.42
NR4A1-214ENST00000550339 PZPP20742 1482 aa17.66■□□□□ 0.42
NR4A1-214ENST00000550339 CEBPAP49715 358 aaPredicted RBP17.65■□□□□ 0.42
NR4A1-214ENST00000550339 MPHOSPH9Q99550 1183 aa17.65■□□□□ 0.42
NR4A1-214ENST00000550339 ZMYM3Q14202 1370 aa17.65■□□□□ 0.42
NR4A1-214ENST00000550339 CAMSAP1Q5T5Y3 1602 aa17.65■□□□□ 0.42
NR4A1-214ENST00000550339 CFAP65Q6ZU64 1925 aaKnown RBP17.64■□□□□ 0.41
NR4A1-214ENST00000550339 LMTK2Q8IWU2 1503 aa17.63■□□□□ 0.41
NR4A1-214ENST00000550339 PKD2Q13563 968 aa17.63■□□□□ 0.41
NR4A1-214ENST00000550339 TET3O43151 1660 aa17.63■□□□□ 0.41
NR4A1-214ENST00000550339 MROH2AA6NES4 1674 aa17.61■□□□□ 0.41
NR4A1-214ENST00000550339 EFCAB6Q5THR3 1501 aa17.61■□□□□ 0.41
NR4A1-214ENST00000550339 C3P01024 1663 aa17.61■□□□□ 0.41
NR4A1-214ENST00000550339 FBXO31Q5XUX0 539 aaPredicted RBP17.6■□□□□ 0.41
NR4A1-214ENST00000550339 PTPRMP28827 1452 aa17.6■□□□□ 0.41
NR4A1-214ENST00000550339 E9PCH4 1651 aa17.59■□□□□ 0.41
NR4A1-214ENST00000550339 NPATQ14207 1427 aa17.59■□□□□ 0.41
NR4A1-214ENST00000550339 ARHGAP31Q2M1Z3 1444 aa17.57■□□□□ 0.4
NR4A1-214ENST00000550339 DHX57Q6P158 1386 aaKnown RBP17.54■□□□□ 0.4
NR4A1-214ENST00000550339 RPRD2Q5VT52 1461 aaKnown RBP17.54■□□□□ 0.4
NR4A1-214ENST00000550339 PREX1Q8TCU6 1659 aa17.54■□□□□ 0.4
NR4A1-214ENST00000550339 ERVK-7P63135 1459 aa17.53■□□□□ 0.4
NR4A1-214ENST00000550339 TNRQ92752 1358 aa17.51■□□□□ 0.39
NR4A1-214ENST00000550339 SPHKAPQ2M3C7 1700 aa17.5■□□□□ 0.39
NR4A1-214ENST00000550339 SPATA31D1Q6ZQQ2 1576 aa17.49■□□□□ 0.39
NR4A1-214ENST00000550339 NOS1P29475 1434 aa17.49■□□□□ 0.39
NR4A1-214ENST00000550339 SYNMO15061 1565 aa17.48■□□□□ 0.39
NR4A1-214ENST00000550339 CCER1Q8TC90 406 aaPredicted RBP17.47■□□□□ 0.39
NR4A1-214ENST00000550339 PLA2R1Q13018 1463 aa17.47■□□□□ 0.39
NR4A1-214ENST00000550339 PTPRTO14522 1441 aa17.47■□□□□ 0.39
NR4A1-214ENST00000550339 UGGT1Q9NYU2 1555 aa17.46■□□□□ 0.39
NR4A1-214ENST00000550339 SETD1BQ9UPS6 1966 aaKnown RBP17.46■□□□□ 0.39
NR4A1-214ENST00000550339 ANKRD30BQ9BXX2 1392 aa17.45■□□□□ 0.38
NR4A1-214ENST00000550339 CHGAP10645 457 aaKnown RBP17.45■□□□□ 0.38
NR4A1-214ENST00000550339 IDI1Q13907 227 aa17.45■□□□□ 0.38
NR4A1-214ENST00000550339 TRPM2O94759 1503 aa17.44■□□□□ 0.38
NR4A1-214ENST00000550339 SLC52A1Q9NWF4 448 aa17.44■□□□□ 0.38
NR4A1-214ENST00000550339 STAG3Q9UJ98 1225 aa17.43■□□□□ 0.38
NR4A1-214ENST00000550339 CCDC144AA2RUR9 1427 aa17.43■□□□□ 0.38
NR4A1-214ENST00000550339 CLTCL1P53675 1640 aa17.43■□□□□ 0.38
NR4A1-214ENST00000550339 MYO3AQ8NEV4 1616 aa17.42■□□□□ 0.38
NR4A1-214ENST00000550339 UHRF1BP1Q6BDS2 1440 aa17.41■□□□□ 0.38
NR4A1-214ENST00000550339 SIN3AQ96ST3 1273 aa17.41■□□□□ 0.38
NR4A1-214ENST00000550339 NLRP1Q9C000 1473 aa17.4■□□□□ 0.38
NR4A1-214ENST00000550339 NEUROD1Q13562 356 aa17.4■□□□□ 0.38
NR4A1-214ENST00000550339 PIK3C2BO00750 1634 aa17.39■□□□□ 0.38
NR4A1-214ENST00000550339 A2ML1A8K2U0 1454 aa17.37■□□□□ 0.37
NR4A1-214ENST00000550339 CEP170BQ9Y4F5 1589 aaPredicted RBP17.37■□□□□ 0.37
NR4A1-214ENST00000550339 KIF1BO60333 1816 aa17.37■□□□□ 0.37
NR4A1-214ENST00000550339 RGL3Q3MIN7 710 aa17.36■□□□□ 0.37
NR4A1-214ENST00000550339 ZNF326Q5BKZ1 582 aaKnown RBP17.36■□□□□ 0.37
NR4A1-214ENST00000550339 MYO5BQ9ULV0 1848 aa17.35■□□□□ 0.37
NR4A1-214ENST00000550339 ADGRB3O60242 1522 aa17.34■□□□□ 0.37
NR4A1-214ENST00000550339 ZNF142P52746 1687 aaPredicted RBP17.34■□□□□ 0.37
NR4A1-214ENST00000550339 UBR1Q8IWV7 1749 aa17.34■□□□□ 0.37
NR4A1-214ENST00000550339 TMEM131LA2VDJ0 1609 aa17.33■□□□□ 0.37
NR4A1-214ENST00000550339 HSPA2P54652 639 aa17.33■□□□□ 0.36
NR4A1-214ENST00000550339 THEMISQ8N1K5 641 aaPredicted RBP17.33■□□□□ 0.36
NR4A1-214ENST00000550339 LMTK3Q96Q04 1460 aa17.31■□□□□ 0.36
NR4A1-214ENST00000550339 CLSPNQ9HAW4 1339 aa17.31■□□□□ 0.36
NR4A1-214ENST00000550339 NUTM2DQ5VT03 806 aaPredicted RBP17.3■□□□□ 0.36
NR4A1-214ENST00000550339 SPATA31E1Q6ZUB1 1445 aa17.3■□□□□ 0.36
NR4A1-214ENST00000550339 KDM5AP29375 1690 aaKnown RBP17.29■□□□□ 0.36
NR4A1-214ENST00000550339 TMEM2Q9UHN6 1383 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms