RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 RNF17Q9BXT8 1623 aaKnown RBP12.04□□□□□ -0.48
GPN3-207ENST00000550228 BCORL1Q5H9F3 1711 aa12.03□□□□□ -0.48
GPN3-207ENST00000550228 CCER1Q8TC90 406 aaPredicted RBP12.03□□□□□ -0.48
GPN3-207ENST00000550228 NUP155O75694 1391 aa12.03□□□□□ -0.48
GPN3-207ENST00000550228 DHX57Q6P158 1386 aaKnown RBP12.03□□□□□ -0.48
GPN3-207ENST00000550228 MROH1Q8NDA8 1641 aa12.02□□□□□ -0.49
GPN3-207ENST00000550228 PZPP20742 1482 aa12.02□□□□□ -0.49
GPN3-207ENST00000550228 KDM5DQ9BY66 1539 aa12.01□□□□□ -0.49
GPN3-207ENST00000550228 IQGAP3Q86VI3 1631 aa12.01□□□□□ -0.49
GPN3-207ENST00000550228 CEP152O94986 1710 aa12.01□□□□□ -0.49
GPN3-207ENST00000550228 PRDM15P57071 1507 aaPredicted RBP12.01□□□□□ -0.49
GPN3-207ENST00000550228 FAM135AQ9P2D6 1515 aa12.01□□□□□ -0.49
GPN3-207ENST00000550228 GGT6Q6P531 493 aa12□□□□□ -0.49
GPN3-207ENST00000550228 ARID4BQ4LE39 1312 aaPredicted RBP12□□□□□ -0.49
GPN3-207ENST00000550228 ACIN1Q9UKV3 1341 aaKnown RBP12□□□□□ -0.49
GPN3-207ENST00000550228 KANK1Q14678 1352 aa12□□□□□ -0.49
GPN3-207ENST00000550228 AGLP35573 1532 aa12□□□□□ -0.49
GPN3-207ENST00000550228 MLECQ14165 292 aa11.99□□□□□ -0.49
GPN3-207ENST00000550228 SLC4A1APQ9BWU0 796 aaKnown RBP11.99□□□□□ -0.49
GPN3-207ENST00000550228 MPHOSPH9Q99550 1183 aa11.98□□□□□ -0.49
GPN3-207ENST00000550228 VWDEQ8N2E2 1590 aa11.97□□□□□ -0.49
GPN3-207ENST00000550228 FOXD1Q16676 465 aa11.96□□□□□ -0.49
GPN3-207ENST00000550228 TET3O43151 1660 aa11.96□□□□□ -0.5
GPN3-207ENST00000550228 ZC3H13Q5T200 1668 aaKnown RBP11.95□□□□□ -0.5
GPN3-207ENST00000550228 PKD2Q13563 968 aa11.95□□□□□ -0.5
GPN3-207ENST00000550228 ABCC3O15438 1527 aa11.95□□□□□ -0.5
GPN3-207ENST00000550228 CLTCQ00610 1675 aaKnown RBP11.94□□□□□ -0.5
GPN3-207ENST00000550228 CAMSAP1Q5T5Y3 1602 aa11.94□□□□□ -0.5
GPN3-207ENST00000550228 E9PCH4 1651 aa11.94□□□□□ -0.5
GPN3-207ENST00000550228 WASHC2CQ9Y4E1 1318 aa11.93□□□□□ -0.5
GPN3-207ENST00000550228 LMTK2Q8IWU2 1503 aa11.93□□□□□ -0.5
GPN3-207ENST00000550228 EFCAB6Q5THR3 1501 aa11.92□□□□□ -0.5
GPN3-207ENST00000550228 FER1L4A9Z1Z3 1794 aa11.92□□□□□ -0.5
GPN3-207ENST00000550228 CFAP65Q6ZU64 1925 aaKnown RBP11.92□□□□□ -0.5
GPN3-207ENST00000550228 ESF1Q9H501 851 aaKnown RBP11.9□□□□□ -0.5
GPN3-207ENST00000550228 SPHKAPQ2M3C7 1700 aa11.89□□□□□ -0.51
GPN3-207ENST00000550228 CLSPNQ9HAW4 1339 aa11.88□□□□□ -0.51
GPN3-207ENST00000550228 SIN3AQ96ST3 1273 aa11.88□□□□□ -0.51
GPN3-207ENST00000550228 ANKRD30BQ9BXX2 1392 aa11.88□□□□□ -0.51
GPN3-207ENST00000550228 RIMS1Q86UR5 1692 aaKnown RBP11.87□□□□□ -0.51
GPN3-207ENST00000550228 NPATQ14207 1427 aa11.87□□□□□ -0.51
GPN3-207ENST00000550228 MADDQ8WXG6 1647 aa11.87□□□□□ -0.51
GPN3-207ENST00000550228 NEUROD1Q13562 356 aa11.87□□□□□ -0.51
GPN3-207ENST00000550228 PPP6R1Q9UPN7 881 aa11.87□□□□□ -0.51
GPN3-207ENST00000550228 MROH2AA6NES4 1674 aa11.86□□□□□ -0.51
GPN3-207ENST00000550228 ADAMTSL3P82987 1691 aa11.85□□□□□ -0.51
GPN3-207ENST00000550228 PREX1Q8TCU6 1659 aa11.85□□□□□ -0.51
GPN3-207ENST00000550228 RPRD2Q5VT52 1461 aaKnown RBP11.85□□□□□ -0.51
GPN3-207ENST00000550228 TRPM2O94759 1503 aa11.85□□□□□ -0.51
GPN3-207ENST00000550228 ARHGAP31Q2M1Z3 1444 aa11.85□□□□□ -0.51
GPN3-207ENST00000550228 CNTLNQ9NXG0 1405 aa11.85□□□□□ -0.51
GPN3-207ENST00000550228 PLA2R1Q13018 1463 aa11.84□□□□□ -0.51
GPN3-207ENST00000550228 PLPPR3Q6T4P5 718 aa11.84□□□□□ -0.51
GPN3-207ENST00000550228 CLTCL1P53675 1640 aa11.83□□□□□ -0.52
GPN3-207ENST00000550228 C3P01024 1663 aa11.83□□□□□ -0.52
GPN3-207ENST00000550228 CCDC144AA2RUR9 1427 aa11.83□□□□□ -0.52
GPN3-207ENST00000550228 PTPRTO14522 1441 aa11.83□□□□□ -0.52
GPN3-207ENST00000550228 UGGT1Q9NYU2 1555 aa11.83□□□□□ -0.52
GPN3-207ENST00000550228 ERVK-7P63135 1459 aa11.83□□□□□ -0.52
GPN3-207ENST00000550228 ZMYM3Q14202 1370 aa11.82□□□□□ -0.52
GPN3-207ENST00000550228 FBXO31Q5XUX0 539 aaPredicted RBP11.82□□□□□ -0.52
GPN3-207ENST00000550228 SYNMO15061 1565 aa11.82□□□□□ -0.52
GPN3-207ENST00000550228 NOS1P29475 1434 aa11.8□□□□□ -0.52
GPN3-207ENST00000550228 CEBPAP49715 358 aaPredicted RBP11.8□□□□□ -0.52
GPN3-207ENST00000550228 TONSLQ96HA7 1378 aa11.79□□□□□ -0.52
GPN3-207ENST00000550228 SPATA31D1Q6ZQQ2 1576 aa11.79□□□□□ -0.52
GPN3-207ENST00000550228 KIF1BO60333 1816 aa11.79□□□□□ -0.52
GPN3-207ENST00000550228 ZEB1P37275 1124 aaPredicted RBP11.79□□□□□ -0.52
GPN3-207ENST00000550228 PIK3C2BO00750 1634 aa11.78□□□□□ -0.52
GPN3-207ENST00000550228 CHGAP10645 457 aaKnown RBP11.77□□□□□ -0.53
GPN3-207ENST00000550228 TNRQ92752 1358 aa11.77□□□□□ -0.53
GPN3-207ENST00000550228 MYO5BQ9ULV0 1848 aa11.76□□□□□ -0.53
GPN3-207ENST00000550228 RGL3Q3MIN7 710 aa11.75□□□□□ -0.53
GPN3-207ENST00000550228 PTPRMP28827 1452 aa11.74□□□□□ -0.53
GPN3-207ENST00000550228 ADGRB3O60242 1522 aa11.74□□□□□ -0.53
GPN3-207ENST00000550228 IDI1Q13907 227 aa11.73□□□□□ -0.53
GPN3-207ENST00000550228 SPATA31E1Q6ZUB1 1445 aa11.73□□□□□ -0.53
GPN3-207ENST00000550228 L3MBTL2Q969R5 705 aa11.73□□□□□ -0.53
GPN3-207ENST00000550228 SLC52A1Q9NWF4 448 aa11.73□□□□□ -0.53
GPN3-207ENST00000550228 MYO3AQ8NEV4 1616 aa11.72□□□□□ -0.53
GPN3-207ENST00000550228 ZNF326Q5BKZ1 582 aaKnown RBP11.72□□□□□ -0.53
GPN3-207ENST00000550228 STAG3Q9UJ98 1225 aa11.72□□□□□ -0.53
GPN3-207ENST00000550228 TMEM131LA2VDJ0 1609 aa11.71□□□□□ -0.53
GPN3-207ENST00000550228 KDM4FA0A1W2PPD8 638 aa11.7□□□□□ -0.54
GPN3-207ENST00000550228 TIMELESSQ9UNS1 1208 aa11.7□□□□□ -0.54
GPN3-207ENST00000550228 KDM2AQ9Y2K7 1162 aa11.7□□□□□ -0.54
GPN3-207ENST00000550228 NEURL4Q96JN8 1562 aa11.7□□□□□ -0.54
GPN3-207ENST00000550228 NLRP1Q9C000 1473 aa11.7□□□□□ -0.54
GPN3-207ENST00000550228 UBR1Q8IWV7 1749 aa11.69□□□□□ -0.54
GPN3-207ENST00000550228 IFT172Q9UG01 1749 aa11.69□□□□□ -0.54
GPN3-207ENST00000550228 DCAF11Q8TEB1 546 aa11.69□□□□□ -0.54
GPN3-207ENST00000550228 PPLO60437 1756 aa11.69□□□□□ -0.54
GPN3-207ENST00000550228 A2ML1A8K2U0 1454 aa11.68□□□□□ -0.54
GPN3-207ENST00000550228 CEP170BQ9Y4F5 1589 aaPredicted RBP11.67□□□□□ -0.54
GPN3-207ENST00000550228 PPP1R15AO75807 674 aaPredicted RBP11.67□□□□□ -0.54
GPN3-207ENST00000550228 ZNF142P52746 1687 aaPredicted RBP11.67□□□□□ -0.54
GPN3-207ENST00000550228 SETD1BQ9UPS6 1966 aaKnown RBP11.67□□□□□ -0.54
GPN3-207ENST00000550228 NEXMIFQ5QGS0 1516 aa11.66□□□□□ -0.54
GPN3-207ENST00000550228 KDM5AP29375 1690 aaKnown RBP11.66□□□□□ -0.54
GPN3-207ENST00000550228 NUTM2DQ5VT03 806 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms