RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 ANKRD30AQ9BXX3 1397 aa18.31■□□□□ 0.52
PFDN5-208ENST00000549995 PPARGC1BQ86YN6 1023 aaKnown RBP18.31■□□□□ 0.52
PFDN5-208ENST00000549995 CLTCQ00610 1675 aaKnown RBP18.3■□□□□ 0.52
PFDN5-208ENST00000549995 FAM50AQ14320 339 aaKnown RBP18.29■□□□□ 0.52
PFDN5-208ENST00000549995 PPP6R1Q9UPN7 881 aa18.29■□□□□ 0.52
PFDN5-208ENST00000549995 GCC2Q8IWJ2 1684 aa18.28■□□□□ 0.52
PFDN5-208ENST00000549995 VWDEQ8N2E2 1590 aa18.28■□□□□ 0.52
PFDN5-208ENST00000549995 UNC13BO14795 1591 aa18.25■□□□□ 0.51
PFDN5-208ENST00000549995 ABCC3O15438 1527 aa18.23■□□□□ 0.51
PFDN5-208ENST00000549995 LMTK2Q8IWU2 1503 aa18.23■□□□□ 0.51
PFDN5-208ENST00000549995 MLECQ14165 292 aa18.22■□□□□ 0.51
PFDN5-208ENST00000549995 CEP152O94986 1710 aa18.22■□□□□ 0.51
PFDN5-208ENST00000549995 PREX1Q8TCU6 1659 aa18.22■□□□□ 0.51
PFDN5-208ENST00000549995 CAMSAP1Q5T5Y3 1602 aa18.21■□□□□ 0.51
PFDN5-208ENST00000549995 ANKRD50Q9ULJ7 1429 aa18.21■□□□□ 0.51
PFDN5-208ENST00000549995 KIF3BO15066 747 aa18.2■□□□□ 0.5
PFDN5-208ENST00000549995 NPATQ14207 1427 aa18.19■□□□□ 0.5
PFDN5-208ENST00000549995 RRP7BPQ9NSQ0 103 aa18.19■□□□□ 0.5
PFDN5-208ENST00000549995 CHIC2Q9UKJ5 165 aa18.19■□□□□ 0.5
PFDN5-208ENST00000549995 SETD1BQ9UPS6 1966 aaKnown RBP18.19■□□□□ 0.5
PFDN5-208ENST00000549995 PZPP20742 1482 aa18.18■□□□□ 0.5
PFDN5-208ENST00000549995 IQGAP3Q86VI3 1631 aa18.16■□□□□ 0.5
PFDN5-208ENST00000549995 HFM1A2PYH4 1435 aa18.16■□□□□ 0.5
PFDN5-208ENST00000549995 ZNF142P52746 1687 aaPredicted RBP18.16■□□□□ 0.5
PFDN5-208ENST00000549995 ZMYM3Q14202 1370 aa18.16■□□□□ 0.5
PFDN5-208ENST00000549995 NAIPQ13075 1403 aa18.15■□□□□ 0.5
PFDN5-208ENST00000549995 ARHGAP31Q2M1Z3 1444 aa18.15■□□□□ 0.5
PFDN5-208ENST00000549995 GGT6Q6P531 493 aa18.15■□□□□ 0.5
PFDN5-208ENST00000549995 SPATA31D1Q6ZQQ2 1576 aa18.14■□□□□ 0.49
PFDN5-208ENST00000549995 TET3O43151 1660 aa18.14■□□□□ 0.49
PFDN5-208ENST00000549995 LMTK3Q96Q04 1460 aa18.14■□□□□ 0.49
PFDN5-208ENST00000549995 EFCAB6Q5THR3 1501 aa18.13■□□□□ 0.49
PFDN5-208ENST00000549995 MYO3AQ8NEV4 1616 aa18.13■□□□□ 0.49
PFDN5-208ENST00000549995 ESF1Q9H501 851 aaKnown RBP18.11■□□□□ 0.49
PFDN5-208ENST00000549995 WASHC2CQ9Y4E1 1318 aa18.08■□□□□ 0.49
PFDN5-208ENST00000549995 RPRD2Q5VT52 1461 aaKnown RBP18.07■□□□□ 0.48
PFDN5-208ENST00000549995 KANK1Q14678 1352 aa18.07■□□□□ 0.48
PFDN5-208ENST00000549995 ERVK-7P63135 1459 aa18.07■□□□□ 0.48
PFDN5-208ENST00000549995 ITGAEP38570 1179 aa18.06■□□□□ 0.48
PFDN5-208ENST00000549995 CEBPAP49715 358 aaPredicted RBP18.06■□□□□ 0.48
PFDN5-208ENST00000549995 E9PCH4 1651 aa18.06■□□□□ 0.48
PFDN5-208ENST00000549995 CEP170BQ9Y4F5 1589 aaPredicted RBP18.05■□□□□ 0.48
PFDN5-208ENST00000549995 UHRF1BP1Q6BDS2 1440 aa18.05■□□□□ 0.48
PFDN5-208ENST00000549995 KDM5AP29375 1690 aaKnown RBP18.04■□□□□ 0.48
PFDN5-208ENST00000549995 NLRP1Q9C000 1473 aa18.02■□□□□ 0.48
PFDN5-208ENST00000549995 SYNMO15061 1565 aa18.01■□□□□ 0.47
PFDN5-208ENST00000549995 NOS1P29475 1434 aa18.01■□□□□ 0.47
PFDN5-208ENST00000549995 A2ML1A8K2U0 1454 aa18.01■□□□□ 0.47
PFDN5-208ENST00000549995 PIK3C2BO00750 1634 aa18■□□□□ 0.47
PFDN5-208ENST00000549995 TNRQ92752 1358 aa18■□□□□ 0.47
PFDN5-208ENST00000549995 CFAP65Q6ZU64 1925 aaKnown RBP17.98■□□□□ 0.47
PFDN5-208ENST00000549995 UBR1Q8IWV7 1749 aa17.98■□□□□ 0.47
PFDN5-208ENST00000549995 STRCQ7RTU9 1775 aa17.97■□□□□ 0.47
PFDN5-208ENST00000549995 SPHKAPQ2M3C7 1700 aa17.97■□□□□ 0.47
PFDN5-208ENST00000549995 PLA2R1Q13018 1463 aa17.96■□□□□ 0.47
PFDN5-208ENST00000549995 NUP155O75694 1391 aa17.96■□□□□ 0.47
PFDN5-208ENST00000549995 SETD5Q9C0A6 1442 aa17.96■□□□□ 0.47
PFDN5-208ENST00000549995 ACIN1Q9UKV3 1341 aaKnown RBP17.96■□□□□ 0.46
PFDN5-208ENST00000549995 FBXO31Q5XUX0 539 aaPredicted RBP17.95■□□□□ 0.46
PFDN5-208ENST00000549995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.95■□□□□ 0.464e-10■■□□□ 12.1
PFDN5-208ENST00000549995 POLR1AO95602 1720 aaPredicted RBP17.92■□□□□ 0.46
PFDN5-208ENST00000549995 PTPRTO14522 1441 aa17.92■□□□□ 0.46
PFDN5-208ENST00000549995 UGGT1Q9NYU2 1555 aa17.91■□□□□ 0.46
PFDN5-208ENST00000549995 ADGRB3O60242 1522 aa17.9■□□□□ 0.46
PFDN5-208ENST00000549995 TRPM2O94759 1503 aa17.9■□□□□ 0.46
PFDN5-208ENST00000549995 PLPPR3Q6T4P5 718 aa17.9■□□□□ 0.46
PFDN5-208ENST00000549995 HRCP23327 699 aa17.89■□□□□ 0.45
PFDN5-208ENST00000549995 ARHGAP23Q9P227 1491 aa17.88■□□□□ 0.45
PFDN5-208ENST00000549995 SLIT1O75093 1534 aa17.88■□□□□ 0.45
PFDN5-208ENST00000549995 RAB3GAP2Q9H2M9 1393 aa17.88■□□□□ 0.45
PFDN5-208ENST00000549995 TMEM131LA2VDJ0 1609 aa17.87■□□□□ 0.45
PFDN5-208ENST00000549995 NEURL4Q96JN8 1562 aa17.87■□□□□ 0.45
PFDN5-208ENST00000549995 MYO5BQ9ULV0 1848 aa17.85■□□□□ 0.45
PFDN5-208ENST00000549995 SLC52A1Q9NWF4 448 aa17.84■□□□□ 0.45
PFDN5-208ENST00000549995 CLTCL1P53675 1640 aa17.83■□□□□ 0.45
PFDN5-208ENST00000549995 HSPA2P54652 639 aa17.83■□□□□ 0.44
PFDN5-208ENST00000549995 MED14O60244 1454 aa17.82■□□□□ 0.44
PFDN5-208ENST00000549995 KIF1BO60333 1816 aa17.79■□□□□ 0.44
PFDN5-208ENST00000549995 IDI1Q13907 227 aa17.79■□□□□ 0.44
PFDN5-208ENST00000549995 THEMISQ8N1K5 641 aaPredicted RBP17.79■□□□□ 0.44
PFDN5-208ENST00000549995 PKD2Q13563 968 aa17.78■□□□□ 0.44
PFDN5-208ENST00000549995 IQGAP1P46940 1657 aa17.77■□□□□ 0.44
PFDN5-208ENST00000549995 ZFYVE9O95405 1425 aa17.77■□□□□ 0.44
PFDN5-208ENST00000549995 TRIM52Q96A61 297 aa17.76■□□□□ 0.43
PFDN5-208ENST00000549995 SLC4A1APQ9BWU0 796 aaKnown RBP17.76■□□□□ 0.43
PFDN5-208ENST00000549995 TMEM2Q9UHN6 1383 aa17.76■□□□□ 0.43
PFDN5-208ENST00000549995 MPHOSPH9Q99550 1183 aa17.75■□□□□ 0.43
PFDN5-208ENST00000549995 SCAF11Q99590 1463 aaKnown RBP17.75■□□□□ 0.43
PFDN5-208ENST00000549995 TRIM26Q12899 539 aaPredicted RBP17.74■□□□□ 0.43
PFDN5-208ENST00000549995 DMRT2Q9Y5R5 561 aa17.72■□□□□ 0.43
PFDN5-208ENST00000549995 IFT172Q9UG01 1749 aa17.72■□□□□ 0.43
PFDN5-208ENST00000549995 NEXMIFQ5QGS0 1516 aa17.71■□□□□ 0.43
PFDN5-208ENST00000549995 PPLO60437 1756 aa17.69■□□□□ 0.42
PFDN5-208ENST00000549995 NPHP4O75161 1426 aaPredicted RBP17.69■□□□□ 0.42
PFDN5-208ENST00000549995 ANKLE2Q86XL3 938 aa17.68■□□□□ 0.42
PFDN5-208ENST00000549995 LTBP4Q8N2S1 1624 aa17.68■□□□□ 0.42
PFDN5-208ENST00000549995 NCKAP5LQ9HCH0 1330 aa17.68■□□□□ 0.42
PFDN5-208ENST00000549995 SPATA31E1Q6ZUB1 1445 aa17.67■□□□□ 0.42
PFDN5-208ENST00000549995 RIMS2Q9UQ26 1411 aa17.67■□□□□ 0.42
PFDN5-208ENST00000549995 ANKRD30BQ9BXX2 1392 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms