RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 FBXO31Q5XUX0 539 aaPredicted RBP17.64■□□□□ 0.41
TRAFD1-206ENST00000549358 CCNB3Q8WWL7 1395 aa17.64■□□□□ 0.41
TRAFD1-206ENST00000549358 FYCO1Q9BQS8 1478 aa17.63■□□□□ 0.41
TRAFD1-206ENST00000549358 SHANK2Q9UPX8 1470 aa17.63■□□□□ 0.41
TRAFD1-206ENST00000549358 CPS1P31327 1500 aa17.62■□□□□ 0.41
TRAFD1-206ENST00000549358 ZNF644Q9H582 1327 aaPredicted RBP17.62■□□□□ 0.41
TRAFD1-206ENST00000549358 ANKLE2Q86XL3 938 aa17.6■□□□□ 0.41
TRAFD1-206ENST00000549358 TNRQ92752 1358 aa17.59■□□□□ 0.41
TRAFD1-206ENST00000549358 ADGBQ8N7X0 1667 aa17.58■□□□□ 0.41
TRAFD1-206ENST00000549358 NEURL4Q96JN8 1562 aa17.58■□□□□ 0.41
TRAFD1-206ENST00000549358 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.58■□□□□ 0.4
TRAFD1-206ENST00000549358 KIF3BO15066 747 aa17.58■□□□□ 0.4
TRAFD1-206ENST00000549358 DHX29Q7Z478 1369 aaKnown RBP17.57■□□□□ 0.4
TRAFD1-206ENST00000549358 THEMISQ8N1K5 641 aaPredicted RBP17.57■□□□□ 0.4
TRAFD1-206ENST00000549358 POLR1AO95602 1720 aaPredicted RBP17.55■□□□□ 0.4
TRAFD1-206ENST00000549358 MTUS2Q5JR59 1369 aa17.55■□□□□ 0.4
TRAFD1-206ENST00000549358 WASHC2CQ9Y4E1 1318 aa17.55■□□□□ 0.4
TRAFD1-206ENST00000549358 MBD5Q9P267 1494 aa17.55■□□□□ 0.4
TRAFD1-206ENST00000549358 RTEL1-TNFRSF6BF6WH68 1400 aa17.54■□□□□ 0.4
TRAFD1-206ENST00000549358 VWDEQ8N2E2 1590 aa17.53■□□□□ 0.4
TRAFD1-206ENST00000549358 PZPP20742 1482 aa17.52■□□□□ 0.4
TRAFD1-206ENST00000549358 NPHP4O75161 1426 aaPredicted RBP17.52■□□□□ 0.4
TRAFD1-206ENST00000549358 MIA2Q96PC5 1412 aa17.52■□□□□ 0.4
TRAFD1-206ENST00000549358 ALKQ9UM73 1620 aa17.51■□□□□ 0.39
TRAFD1-206ENST00000549358 KDM5DQ9BY66 1539 aa17.5■□□□□ 0.39
TRAFD1-206ENST00000549358 MED14O60244 1454 aa17.49■□□□□ 0.39
TRAFD1-206ENST00000549358 UGGT1Q9NYU2 1555 aa17.49■□□□□ 0.39
TRAFD1-206ENST00000549358 FAM135AQ9P2D6 1515 aa17.48■□□□□ 0.39
TRAFD1-206ENST00000549358 NLRP1Q9C000 1473 aa17.48■□□□□ 0.39
TRAFD1-206ENST00000549358 TIAM1Q13009 1591 aa17.48■□□□□ 0.39
TRAFD1-206ENST00000549358 DEPDC5O75140 1603 aa17.45■□□□□ 0.38
TRAFD1-206ENST00000549358 LRRC7Q96NW7 1537 aa17.45■□□□□ 0.38
TRAFD1-206ENST00000549358 RGS17Q9UGC6 210 aaPredicted RBP17.44■□□□□ 0.38
TRAFD1-206ENST00000549358 RSPH4AQ5TD94 716 aa17.43■□□□□ 0.38
TRAFD1-206ENST00000549358 CCDC141Q6ZP82 1450 aa17.43■□□□□ 0.38
TRAFD1-206ENST00000549358 IQGAP1P46940 1657 aa17.42■□□□□ 0.38
TRAFD1-206ENST00000549358 TSPY4P0CV99 314 aa17.41■□□□□ 0.38
TRAFD1-206ENST00000549358 TSPY10P0CW01 314 aa17.41■□□□□ 0.38
TRAFD1-206ENST00000549358 EHBP1L1Q8N3D4 1523 aa17.41■□□□□ 0.38
TRAFD1-206ENST00000549358 STRCP1A6NGW2 1772 aa17.4■□□□□ 0.38
TRAFD1-206ENST00000549358 CEP162Q5TB80 1403 aa17.4■□□□□ 0.38
TRAFD1-206ENST00000549358 CAMSAP2Q08AD1 1489 aa17.38■□□□□ 0.37
TRAFD1-206ENST00000549358 RNF17Q9BXT8 1623 aaKnown RBP17.38■□□□□ 0.37
TRAFD1-206ENST00000549358 SYNMO15061 1565 aa17.36■□□□□ 0.37
TRAFD1-206ENST00000549358 LTKP29376 864 aa17.34■□□□□ 0.37
TRAFD1-206ENST00000549358 NCOA2Q15596 1464 aa17.34■□□□□ 0.37
TRAFD1-206ENST00000549358 TXNDC2Q86VQ3 553 aa17.34■□□□□ 0.37
TRAFD1-206ENST00000549358 ABCC3O15438 1527 aa17.33■□□□□ 0.37
TRAFD1-206ENST00000549358 ERVK-7P63135 1459 aa17.32■□□□□ 0.36
TRAFD1-206ENST00000549358 POTEAQ6S8J7 498 aa17.32■□□□□ 0.36
TRAFD1-206ENST00000549358 SCAF11Q99590 1463 aaKnown RBP17.31■□□□□ 0.36
TRAFD1-206ENST00000549358 ZC3H13Q5T200 1668 aaKnown RBP17.31■□□□□ 0.36
TRAFD1-206ENST00000549358 ARHGEF5Q12774 1597 aa17.29■□□□□ 0.36
TRAFD1-206ENST00000549358 EID1Q9Y6B2 187 aa17.29■□□□□ 0.36
TRAFD1-206ENST00000549358 UBR1Q8IWV7 1749 aa17.28■□□□□ 0.36
TRAFD1-206ENST00000549358 FAM135BQ49AJ0 1406 aa17.28■□□□□ 0.36
TRAFD1-206ENST00000549358 ARHGAP23Q9P227 1491 aa17.25■□□□□ 0.35
TRAFD1-206ENST00000549358 RBM33Q96EV2 1170 aaKnown RBP17.24■□□□□ 0.35
TRAFD1-206ENST00000549358 SLIT1O75093 1534 aa17.24■□□□□ 0.35
TRAFD1-206ENST00000549358 XIRP1Q702N8 1843 aaKnown RBP17.24■□□□□ 0.35
TRAFD1-206ENST00000549358 MROH1Q8NDA8 1641 aa17.23■□□□□ 0.35
TRAFD1-206ENST00000549358 STAG3Q9UJ98 1225 aa17.23■□□□□ 0.35
TRAFD1-206ENST00000549358 TMEM94Q12767 1356 aa17.23■□□□□ 0.35
TRAFD1-206ENST00000549358 EIF2AK4Q9P2K8 1649 aaKnown RBP17.22■□□□□ 0.35
TRAFD1-206ENST00000549358 MAST1Q9Y2H9 1570 aa17.21■□□□□ 0.35
TRAFD1-206ENST00000549358 PROSER2Q86WR7 435 aaPredicted RBP17.21■□□□□ 0.35
TRAFD1-206ENST00000549358 CEP152O94986 1710 aa17.21■□□□□ 0.35
TRAFD1-206ENST00000549358 TMEM2Q9UHN6 1383 aa17.2■□□□□ 0.34
TRAFD1-206ENST00000549358 KCNA6P17658 529 aa17.2■□□□□ 0.34
TRAFD1-206ENST00000549358 SLC26A8Q96RN1 970 aa17.2■□□□□ 0.34
TRAFD1-206ENST00000549358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.345e-6■■■□□ 14.8
TRAFD1-206ENST00000549358 CFAP65Q6ZU64 1925 aaKnown RBP17.19■□□□□ 0.34
TRAFD1-206ENST00000549358 ARHGAP31Q2M1Z3 1444 aa17.18■□□□□ 0.34
TRAFD1-206ENST00000549358 ROBO1Q9Y6N7 1651 aa17.17■□□□□ 0.34
TRAFD1-206ENST00000549358 DUOX2Q9NRD8 1548 aa17.16■□□□□ 0.34
TRAFD1-206ENST00000549358 MAPK8IP2Q13387 824 aaPredicted RBP17.16■□□□□ 0.34
TRAFD1-206ENST00000549358 IDI1Q13907 227 aa17.16■□□□□ 0.34
TRAFD1-206ENST00000549358 RRP7BPQ9NSQ0 103 aa17.16■□□□□ 0.34
TRAFD1-206ENST00000549358 PIK3C2BO00750 1634 aa17.16■□□□□ 0.34
TRAFD1-206ENST00000549358 SLAIN2Q9P270 581 aa17.15■□□□□ 0.34
TRAFD1-206ENST00000549358 LRRC9Q6ZRR7 1453 aa17.15■□□□□ 0.34
TRAFD1-206ENST00000549358 BCANQ96GW7 911 aa17.14■□□□□ 0.33
TRAFD1-206ENST00000549358 MAP3K1Q13233 1512 aa17.14■□□□□ 0.33
TRAFD1-206ENST00000549358 KANK4Q5T7N3 995 aaPredicted RBP17.13■□□□□ 0.33
TRAFD1-206ENST00000549358 KIF15Q9NS87 1388 aa17.13■□□□□ 0.33
TRAFD1-206ENST00000549358 MYOM3Q5VTT5 1437 aa17.13■□□□□ 0.33
TRAFD1-206ENST00000549358 PRDM15P57071 1507 aaPredicted RBP17.11■□□□□ 0.33
TRAFD1-206ENST00000549358 EFCAB6Q5THR3 1501 aa17.11■□□□□ 0.33
TRAFD1-206ENST00000549358 TET3O43151 1660 aa17.11■□□□□ 0.33
TRAFD1-206ENST00000549358 SETD1AO15047 1707 aaKnown RBP17.11■□□□□ 0.33
TRAFD1-206ENST00000549358 MSH6P52701 1360 aa17.11■□□□□ 0.33
TRAFD1-206ENST00000549358 JCADQ9P266 1359 aa17.11■□□□□ 0.33
TRAFD1-206ENST00000549358 KANK1Q14678 1352 aa17.1■□□□□ 0.33
TRAFD1-206ENST00000549358 ERBINQ96RT1 1412 aa17.09■□□□□ 0.33
TRAFD1-206ENST00000549358 UPF1Q92900 1129 aaKnown RBP eCLIP17.08■□□□□ 0.32
TRAFD1-206ENST00000549358 PHLPP1O60346 1717 aa17.07■□□□□ 0.32
TRAFD1-206ENST00000549358 TRIM52Q96A61 297 aa17.07■□□□□ 0.32
TRAFD1-206ENST00000549358 NKTRP30414 1462 aaKnown RBP17.06■□□□□ 0.32
TRAFD1-206ENST00000549358 ABCC5O15440 1437 aa17.06■□□□□ 0.32
TRAFD1-206ENST00000549358 MEX3CQ5U5Q3 659 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms