RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 IQGAP1P46940 1657 aa15.85■□□□□ 0.13
SLC48A1-206ENST00000548498 SHANK2Q9UPX8 1470 aa15.84■□□□□ 0.13
SLC48A1-206ENST00000548498 KDM5DQ9BY66 1539 aa15.84■□□□□ 0.13
SLC48A1-206ENST00000548498 CCNB3Q8WWL7 1395 aa15.84■□□□□ 0.13
SLC48A1-206ENST00000548498 MBD5Q9P267 1494 aa15.84■□□□□ 0.13
SLC48A1-206ENST00000548498 DEPDC5O75140 1603 aa15.83■□□□□ 0.13
SLC48A1-206ENST00000548498 CFDP1Q9UEE9 299 aaPredicted RBP15.83■□□□□ 0.12
SLC48A1-206ENST00000548498 SCAF1Q9H7N4 1312 aaKnown RBP15.83■□□□□ 0.12
SLC48A1-206ENST00000548498 PIP4K2BP78356 416 aa15.82■□□□□ 0.12
SLC48A1-206ENST00000548498 PZPP20742 1482 aa15.82■□□□□ 0.12
SLC48A1-206ENST00000548498 EHBP1L1Q8N3D4 1523 aa15.82■□□□□ 0.12
SLC48A1-206ENST00000548498 FAM135AQ9P2D6 1515 aa15.81■□□□□ 0.12
SLC48A1-206ENST00000548498 RNF17Q9BXT8 1623 aaKnown RBP15.8■□□□□ 0.12
SLC48A1-206ENST00000548498 SYNMO15061 1565 aa15.8■□□□□ 0.12
SLC48A1-206ENST00000548498 TNRQ92752 1358 aa15.8■□□□□ 0.12
SLC48A1-206ENST00000548498 ZNF644Q9H582 1327 aaPredicted RBP15.8■□□□□ 0.12
SLC48A1-206ENST00000548498 CFAP65Q6ZU64 1925 aaKnown RBP15.8■□□□□ 0.12
SLC48A1-206ENST00000548498 XIRP1Q702N8 1843 aaKnown RBP15.8■□□□□ 0.12
SLC48A1-206ENST00000548498 ZC3H13Q5T200 1668 aaKnown RBP15.79■□□□□ 0.12
SLC48A1-206ENST00000548498 RTEL1-TNFRSF6BF6WH68 1400 aa15.77■□□□□ 0.12
SLC48A1-206ENST00000548498 MTUS2Q5JR59 1369 aa15.77■□□□□ 0.12
SLC48A1-206ENST00000548498 FBXO31Q5XUX0 539 aaPredicted RBP15.77■□□□□ 0.12
SLC48A1-206ENST00000548498 UGGT1Q9NYU2 1555 aa15.77■□□□□ 0.11
SLC48A1-206ENST00000548498 CEP152O94986 1710 aa15.77■□□□□ 0.11
SLC48A1-206ENST00000548498 MED14O60244 1454 aa15.76■□□□□ 0.11
SLC48A1-206ENST00000548498 DHX29Q7Z478 1369 aaKnown RBP15.75■□□□□ 0.11
SLC48A1-206ENST00000548498 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.75■□□□□ 0.11
SLC48A1-206ENST00000548498 UBR1Q8IWV7 1749 aa15.75■□□□□ 0.11
SLC48A1-206ENST00000548498 TOM1O60784 492 aa15.75■□□□□ 0.11
SLC48A1-206ENST00000548498 CAMSAP2Q08AD1 1489 aa15.75■□□□□ 0.11
SLC48A1-206ENST00000548498 CCDC141Q6ZP82 1450 aa15.75■□□□□ 0.11
SLC48A1-206ENST00000548498 NPHP4O75161 1426 aaPredicted RBP15.75■□□□□ 0.11
SLC48A1-206ENST00000548498 NLRP1Q9C000 1473 aa15.74■□□□□ 0.11
SLC48A1-206ENST00000548498 LRRC7Q96NW7 1537 aa15.72■□□□□ 0.11
SLC48A1-206ENST00000548498 ARHGEF5Q12774 1597 aa15.71■□□□□ 0.11
SLC48A1-206ENST00000548498 CEP162Q5TB80 1403 aa15.71■□□□□ 0.11
SLC48A1-206ENST00000548498 KIF3BO15066 747 aa15.71■□□□□ 0.11
SLC48A1-206ENST00000548498 MROH1Q8NDA8 1641 aa15.71■□□□□ 0.11
SLC48A1-206ENST00000548498 MIA2Q96PC5 1412 aa15.7■□□□□ 0.1
SLC48A1-206ENST00000548498 ABCC3O15438 1527 aa15.7■□□□□ 0.1
SLC48A1-206ENST00000548498 EIF2AK4Q9P2K8 1649 aaKnown RBP15.69■□□□□ 0.1
SLC48A1-206ENST00000548498 NCOA2Q15596 1464 aa15.68■□□□□ 0.1
SLC48A1-206ENST00000548498 ANKLE2Q86XL3 938 aa15.68■□□□□ 0.1
SLC48A1-206ENST00000548498 WASHC2CQ9Y4E1 1318 aa15.67■□□□□ 0.1
SLC48A1-206ENST00000548498 MAST1Q9Y2H9 1570 aa15.66■□□□□ 0.1
SLC48A1-206ENST00000548498 ERVK-7P63135 1459 aa15.65■□□□□ 0.1
SLC48A1-206ENST00000548498 THEMISQ8N1K5 641 aaPredicted RBP15.65■□□□□ 0.1
SLC48A1-206ENST00000548498 SETD1AO15047 1707 aaKnown RBP15.63■□□□□ 0.09
SLC48A1-206ENST00000548498 PIK3C2BO00750 1634 aa15.61■□□□□ 0.09
SLC48A1-206ENST00000548498 CROCC2H7BZ55 1655 aa15.6■□□□□ 0.09
SLC48A1-206ENST00000548498 SCAF11Q99590 1463 aaKnown RBP15.6■□□□□ 0.09
SLC48A1-206ENST00000548498 RGS17Q9UGC6 210 aaPredicted RBP15.59■□□□□ 0.09
SLC48A1-206ENST00000548498 ARHGAP23Q9P227 1491 aa15.59■□□□□ 0.09
SLC48A1-206ENST00000548498 SLIT1O75093 1534 aa15.58■□□□□ 0.09
SLC48A1-206ENST00000548498 ROBO1Q9Y6N7 1651 aa15.58■□□□□ 0.08
SLC48A1-206ENST00000548498 PRDM15P57071 1507 aaPredicted RBP15.57■□□□□ 0.08
SLC48A1-206ENST00000548498 KDM5AP29375 1690 aaKnown RBP15.55■□□□□ 0.08
SLC48A1-206ENST00000548498 RSPH4AQ5TD94 716 aa15.54■□□□□ 0.08
SLC48A1-206ENST00000548498 MAP3K1Q13233 1512 aa15.53■□□□□ 0.08
SLC48A1-206ENST00000548498 VPS8Q8N3P4 1428 aa15.52■□□□□ 0.08
SLC48A1-206ENST00000548498 MYO5BQ9ULV0 1848 aa15.52■□□□□ 0.08
SLC48A1-206ENST00000548498 LOC105371045A0A1W2PR82 267 aa15.52■□□□□ 0.08
SLC48A1-206ENST00000548498 DUOX2Q9NRD8 1548 aa15.52■□□□□ 0.07
SLC48A1-206ENST00000548498 PHLPP1O60346 1717 aa15.51■□□□□ 0.07
SLC48A1-206ENST00000548498 TSPY4P0CV99 314 aa15.5■□□□□ 0.07
SLC48A1-206ENST00000548498 TSPY10P0CW01 314 aa15.5■□□□□ 0.07
SLC48A1-206ENST00000548498 LTKP29376 864 aa15.5■□□□□ 0.07
SLC48A1-206ENST00000548498 LRRC9Q6ZRR7 1453 aa15.5■□□□□ 0.07
SLC48A1-206ENST00000548498 NWD1Q149M9 1564 aa15.49■□□□□ 0.07
SLC48A1-206ENST00000548498 ARHGAP31Q2M1Z3 1444 aa15.47■□□□□ 0.07
SLC48A1-206ENST00000548498 FAM135BQ49AJ0 1406 aa15.47■□□□□ 0.07
SLC48A1-206ENST00000548498 POTEAQ6S8J7 498 aa15.47■□□□□ 0.07
SLC48A1-206ENST00000548498 TET3O43151 1660 aa15.47■□□□□ 0.07
SLC48A1-206ENST00000548498 EFCAB6Q5THR3 1501 aa15.47■□□□□ 0.07
SLC48A1-206ENST00000548498 TXNDC2Q86VQ3 553 aa15.46■□□□□ 0.07
SLC48A1-206ENST00000548498 CHD2O14647 1828 aaKnown RBP15.45■□□□□ 0.06
SLC48A1-206ENST00000548498 TMEM94Q12767 1356 aa15.45■□□□□ 0.06
SLC48A1-206ENST00000548498 MYOM3Q5VTT5 1437 aa15.44■□□□□ 0.06
SLC48A1-206ENST00000548498 TMEM2Q9UHN6 1383 aa15.44■□□□□ 0.06
SLC48A1-206ENST00000548498 ERBINQ96RT1 1412 aa15.43■□□□□ 0.06
SLC48A1-206ENST00000548498 ADGRB3O60242 1522 aa15.43■□□□□ 0.06
SLC48A1-206ENST00000548498 COL16A1Q07092 1604 aaPredicted RBP15.43■□□□□ 0.06
SLC48A1-206ENST00000548498 GCC2Q8IWJ2 1684 aa15.43■□□□□ 0.06
SLC48A1-206ENST00000548498 PTPN23Q9H3S7 1636 aa15.43■□□□□ 0.06
SLC48A1-206ENST00000548498 NKTRP30414 1462 aaKnown RBP15.42■□□□□ 0.06
SLC48A1-206ENST00000548498 KIF15Q9NS87 1388 aa15.41■□□□□ 0.06
SLC48A1-206ENST00000548498 LMTK2Q8IWU2 1503 aa15.4■□□□□ 0.06
SLC48A1-206ENST00000548498 RBM33Q96EV2 1170 aaKnown RBP15.4■□□□□ 0.06
SLC48A1-206ENST00000548498 EID1Q9Y6B2 187 aa15.39■□□□□ 0.05
SLC48A1-206ENST00000548498 ABCC5O15440 1437 aa15.38■□□□□ 0.05
SLC48A1-206ENST00000548498 KANK4Q5T7N3 995 aaPredicted RBP15.37■□□□□ 0.05
SLC48A1-206ENST00000548498 SHPRHQ149N8 1683 aa15.37■□□□□ 0.05
SLC48A1-206ENST00000548498 LRP6O75581 1613 aa15.36■□□□□ 0.05
SLC48A1-206ENST00000548498 SLC26A8Q96RN1 970 aa15.36■□□□□ 0.05
SLC48A1-206ENST00000548498 KCNA6P17658 529 aa15.35■□□□□ 0.05
SLC48A1-206ENST00000548498 NOS1P29475 1434 aa15.34■□□□□ 0.05
SLC48A1-206ENST00000548498 DAPK1P53355 1430 aa15.34■□□□□ 0.05
SLC48A1-206ENST00000548498 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.34■□□□□ 0.05
SLC48A1-206ENST00000548498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
SLC48A1-206ENST00000548498 TMEM131LA2VDJ0 1609 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms