RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 CD109Q6YHK3 1445 aa9.51□□□□□ -0.89
PTPRR-207ENST00000548220 KIAA1107Q9UPP5 1409 aa9.51□□□□□ -0.89
PTPRR-207ENST00000548220 RASEFQ8IZ41 740 aa9.5□□□□□ -0.89
PTPRR-207ENST00000548220 KCNH8Q96L42 1107 aa9.5□□□□□ -0.89
PTPRR-207ENST00000548220 FGD6Q6ZV73 1430 aa9.5□□□□□ -0.89
PTPRR-207ENST00000548220 TCOF1Q13428 1488 aaKnown RBP9.5□□□□□ -0.89
PTPRR-207ENST00000548220 TEX14Q8IWB6 1497 aa9.5□□□□□ -0.89
PTPRR-207ENST00000548220 NEO1Q92859 1461 aa9.5□□□□□ -0.89
PTPRR-207ENST00000548220 TTC37Q6PGP7 1564 aa9.5□□□□□ -0.89
PTPRR-207ENST00000548220 ATN1P54259 1190 aaPredicted RBP9.5□□□□□ -0.89
PTPRR-207ENST00000548220 CFDP1Q9UEE9 299 aaPredicted RBP9.5□□□□□ -0.89
PTPRR-207ENST00000548220 TIE1P35590 1138 aa9.49□□□□□ -0.89
PTPRR-207ENST00000548220 MAP3K13O43283 966 aa9.48□□□□□ -0.89
PTPRR-207ENST00000548220 FAM69CQ0P6D2 419 aa9.48□□□□□ -0.89
PTPRR-207ENST00000548220 TRIM26Q12899 539 aaPredicted RBP9.48□□□□□ -0.89
PTPRR-207ENST00000548220 BMP2KQ9NSY1 1161 aaPredicted RBP9.48□□□□□ -0.89
PTPRR-207ENST00000548220 ACIN1Q9UKV3 1341 aaKnown RBP9.48□□□□□ -0.89
PTPRR-207ENST00000548220 SCUBE2Q9NQ36 999 aa9.47□□□□□ -0.89
PTPRR-207ENST00000548220 ARHGEF5Q12774 1597 aa9.47□□□□□ -0.89
PTPRR-207ENST00000548220 PTPN23Q9H3S7 1636 aa9.47□□□□□ -0.89
PTPRR-207ENST00000548220 FANCAO15360 1455 aa9.46□□□□□ -0.9
PTPRR-207ENST00000548220 ARHGAP5Q13017 1502 aa9.46□□□□□ -0.9
PTPRR-207ENST00000548220 FKBP8Q14318 412 aa9.46□□□□□ -0.9
PTPRR-207ENST00000548220 POTEMA6NI47 508 aa9.45□□□□□ -0.9
PTPRR-207ENST00000548220 SGIP1Q9BQI5 828 aa9.45□□□□□ -0.9
PTPRR-207ENST00000548220 AKNAQ7Z591 1439 aa9.43□□□□□ -0.9
PTPRR-207ENST00000548220 POTEJP0CG39 1038 aa9.43□□□□□ -0.9
PTPRR-207ENST00000548220 PPRC1Q5VV67 1664 aaKnown RBP9.43□□□□□ -0.9
PTPRR-207ENST00000548220 SAMD9LQ8IVG5 1584 aa9.43□□□□□ -0.9
PTPRR-207ENST00000548220 ABCC1P33527 1531 aa9.43□□□□□ -0.9
PTPRR-207ENST00000548220 CAMSAP2Q08AD1 1489 aa9.43□□□□□ -0.9
PTPRR-207ENST00000548220 MBD5Q9P267 1494 aa9.43□□□□□ -0.9
PTPRR-207ENST00000548220 DNMT1P26358 1616 aaKnown RBP9.42□□□□□ -0.9
PTPRR-207ENST00000548220 POTEGQ6S5H5 508 aa9.42□□□□□ -0.9
PTPRR-207ENST00000548220 TRPC6Q9Y210 931 aa9.42□□□□□ -0.9
PTPRR-207ENST00000548220 SHANK2Q9UPX8 1470 aa9.42□□□□□ -0.9
PTPRR-207ENST00000548220 ROCK1Q13464 1354 aa9.42□□□□□ -0.9
PTPRR-207ENST00000548220 ZNF518AQ6AHZ1 1483 aa9.41□□□□□ -0.9
PTPRR-207ENST00000548220 RTEL1-TNFRSF6BF6WH68 1400 aa9.41□□□□□ -0.9
PTPRR-207ENST00000548220 MAST1Q9Y2H9 1570 aa9.41□□□□□ -0.9
PTPRR-207ENST00000548220 TTLL13PA6NNM8 815 aa9.4□□□□□ -0.9
PTPRR-207ENST00000548220 TSPY4P0CV99 314 aa9.4□□□□□ -0.9
PTPRR-207ENST00000548220 TSPY10P0CW01 314 aa9.4□□□□□ -0.9
PTPRR-207ENST00000548220 PPARGC1BQ86YN6 1023 aaKnown RBP9.4□□□□□ -0.9
PTPRR-207ENST00000548220 FAM212AQ96EL1 285 aa9.4□□□□□ -0.9
PTPRR-207ENST00000548220 PCDHB13Q9Y5F0 798 aa9.4□□□□□ -0.9
PTPRR-207ENST00000548220 ADGRL1O94910 1474 aa9.4□□□□□ -0.9
PTPRR-207ENST00000548220 CCDC141Q6ZP82 1450 aa9.4□□□□□ -0.9
PTPRR-207ENST00000548220 MAGI2Q86UL8 1455 aa9.4□□□□□ -0.9
PTPRR-207ENST00000548220 SEC24BO95487 1268 aa9.39□□□□□ -0.91
PTPRR-207ENST00000548220 HRCP23327 699 aa9.39□□□□□ -0.91
PTPRR-207ENST00000548220 NUBP1P53384 320 aa9.39□□□□□ -0.91
PTPRR-207ENST00000548220 TSPOAP1O95153 1857 aa9.39□□□□□ -0.91
PTPRR-207ENST00000548220 CROCC2H7BZ55 1655 aa9.39□□□□□ -0.91
PTPRR-207ENST00000548220 DENND4BO75064 1496 aaPredicted RBP9.39□□□□□ -0.91
PTPRR-207ENST00000548220 ADGRL2O95490 1459 aa9.39□□□□□ -0.91
PTPRR-207ENST00000548220 MLH3Q9UHC1 1453 aa9.39□□□□□ -0.91
PTPRR-207ENST00000548220 PCDH10Q9P2E7 1040 aa9.38□□□□□ -0.91
PTPRR-207ENST00000548220 DAPK1P53355 1430 aa9.38□□□□□ -0.91
PTPRR-207ENST00000548220 SCAPERQ9BY12 1400 aa9.38□□□□□ -0.91
PTPRR-207ENST00000548220 KDM5CP41229 1560 aa9.38□□□□□ -0.91
PTPRR-207ENST00000548220 ABCC5O15440 1437 aa9.38□□□□□ -0.91
PTPRR-207ENST00000548220 POGZQ7Z3K3 1410 aa9.38□□□□□ -0.91
PTPRR-207ENST00000548220 FAM50AQ14320 339 aaKnown RBP9.37□□□□□ -0.91
PTPRR-207ENST00000548220 IER5LQ5T953 404 aa9.37□□□□□ -0.91
PTPRR-207ENST00000548220 ZMYM4Q5VZL5 1548 aa9.37□□□□□ -0.91
PTPRR-207ENST00000548220 SYCP2Q9BX26 1530 aa9.37□□□□□ -0.91
PTPRR-207ENST00000548220 RICTORQ6R327 1708 aa9.37□□□□□ -0.91
PTPRR-207ENST00000548220 ZNF644Q9H582 1327 aaPredicted RBP9.37□□□□□ -0.91
PTPRR-207ENST00000548220 ZNF777Q9ULD5 760 aaPredicted RBP9.37□□□□□ -0.91
PTPRR-207ENST00000548220 PLXNC1O60486 1568 aa9.36□□□□□ -0.91
PTPRR-207ENST00000548220 ADGBQ8N7X0 1667 aa9.36□□□□□ -0.91
PTPRR-207ENST00000548220 NCOA1Q15788 1441 aa9.36□□□□□ -0.91
PTPRR-207ENST00000548220 ARHGEF12Q9NZN5 1544 aa9.36□□□□□ -0.91
PTPRR-207ENST00000548220 POTEFA5A3E0 1075 aa9.36□□□□□ -0.91
PTPRR-207ENST00000548220 HNRNPMP52272 730 aaKnown RBP eCLIP9.36□□□□□ -0.91
PTPRR-207ENST00000548220 TRIM35Q9UPQ4 493 aa9.35□□□□□ -0.91
PTPRR-207ENST00000548220 ANKRD30AQ9BXX3 1397 aa9.35□□□□□ -0.91
PTPRR-207ENST00000548220 SPAG9O60271 1321 aaKnown RBP9.34□□□□□ -0.91
PTPRR-207ENST00000548220 C9orf84Q5VXU9 1444 aa9.34□□□□□ -0.91
PTPRR-207ENST00000548220 INO80Q9ULG1 1556 aaPredicted RBP9.34□□□□□ -0.91
PTPRR-207ENST00000548220 HFM1A2PYH4 1435 aa9.33□□□□□ -0.92
PTPRR-207ENST00000548220 TRAPPC8Q9Y2L5 1435 aa9.33□□□□□ -0.92
PTPRR-207ENST00000548220 HECW2Q9P2P5 1572 aa9.32□□□□□ -0.92
PTPRR-207ENST00000548220 REREQ9P2R6 1566 aa9.32□□□□□ -0.92
PTPRR-207ENST00000548220 AFAP1Q8N556 730 aa9.32□□□□□ -0.92
PTPRR-207ENST00000548220 FAM163AQ96GL9 167 aaPredicted RBP9.32□□□□□ -0.92
PTPRR-207ENST00000548220 FBXO3Q9UK99 471 aa9.32□□□□□ -0.92
PTPRR-207ENST00000548220 COLQQ9Y215 455 aaPredicted RBP9.32□□□□□ -0.92
PTPRR-207ENST00000548220 ATP7AQ04656 1500 aa9.32□□□□□ -0.92
PTPRR-207ENST00000548220 KIDINS220Q9ULH0 1771 aa9.32□□□□□ -0.92
PTPRR-207ENST00000548220 ZFYVE16Q7Z3T8 1539 aa9.31□□□□□ -0.92
PTPRR-207ENST00000548220 DUOX2Q9NRD8 1548 aa9.31□□□□□ -0.92
PTPRR-207ENST00000548220 GCC2Q8IWJ2 1684 aa9.31□□□□□ -0.92
PTPRR-207ENST00000548220 IFNL1Q8IU54 200 aa9.31□□□□□ -0.92
PTPRR-207ENST00000548220 PTPRKQ15262 1439 aa9.31□□□□□ -0.92
PTPRR-207ENST00000548220 BCORL1Q5H9F3 1711 aa9.31□□□□□ -0.92
PTPRR-207ENST00000548220 AMER1Q5JTC6 1135 aaPredicted RBP9.3□□□□□ -0.92
PTPRR-207ENST00000548220 FRMPD1Q5SYB0 1578 aa9.3□□□□□ -0.92
PTPRR-207ENST00000548220 ERBINQ96RT1 1412 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms