RNA–Protein interactions for RNA: ENST00000547878.6

TMEM116-205, Transcript of transmembrane protein 116, humanhuman

TSL 2

Gene TMEM116, Length 1,716 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-205ENST00000547878 PKD2Q13563 968 aa12.6□□□□□ -0.39
TMEM116-205ENST00000547878 FMN1Q68DA7 1419 aa12.6□□□□□ -0.39
TMEM116-205ENST00000547878 SUPT6HQ7KZ85 1726 aaKnown RBP12.6□□□□□ -0.39
TMEM116-205ENST00000547878 CCNB3Q8WWL7 1395 aa12.59□□□□□ -0.39
TMEM116-205ENST00000547878 PPP6R1Q9UPN7 881 aa12.59□□□□□ -0.39
TMEM116-205ENST00000547878 PTPRKQ15262 1439 aa12.59□□□□□ -0.39
TMEM116-205ENST00000547878 SAMD9LQ8IVG5 1584 aa12.58□□□□□ -0.4
TMEM116-205ENST00000547878 ALKQ9UM73 1620 aa12.57□□□□□ -0.4
TMEM116-205ENST00000547878 KANK4Q5T7N3 995 aaPredicted RBP12.57□□□□□ -0.4
TMEM116-205ENST00000547878 CDC42BPAQ5VT25 1732 aa12.55□□□□□ -0.4
TMEM116-205ENST00000547878 NEURL4Q96JN8 1562 aa12.54□□□□□ -0.4
TMEM116-205ENST00000547878 DNMT1P26358 1616 aaKnown RBP12.54□□□□□ -0.4
TMEM116-205ENST00000547878 TOM1O60784 492 aa12.54□□□□□ -0.4
TMEM116-205ENST00000547878 EIF5BO60841 1220 aaKnown RBP12.54□□□□□ -0.4
TMEM116-205ENST00000547878 PLXNC1O60486 1568 aa12.54□□□□□ -0.4
TMEM116-205ENST00000547878 SYCP2Q9BX26 1530 aa12.53□□□□□ -0.4
TMEM116-205ENST00000547878 LRRC9Q6ZRR7 1453 aa12.53□□□□□ -0.4
TMEM116-205ENST00000547878 SHANK2Q9UPX8 1470 aa12.53□□□□□ -0.4
TMEM116-205ENST00000547878 CPS1P31327 1500 aa12.53□□□□□ -0.4
TMEM116-205ENST00000547878 SPAG9O60271 1321 aaKnown RBP12.52□□□□□ -0.41
TMEM116-205ENST00000547878 A2ML1A8K2U0 1454 aa12.52□□□□□ -0.41
TMEM116-205ENST00000547878 ATP7AQ04656 1500 aa12.51□□□□□ -0.41
TMEM116-205ENST00000547878 HNRNPMP52272 730 aaKnown RBP eCLIP12.51□□□□□ -0.41
TMEM116-205ENST00000547878 GGT6Q6P531 493 aa12.51□□□□□ -0.41
TMEM116-205ENST00000547878 ZNF777Q9ULD5 760 aaPredicted RBP12.51□□□□□ -0.41
TMEM116-205ENST00000547878 POLR1AO95602 1720 aaPredicted RBP12.51□□□□□ -0.41
TMEM116-205ENST00000547878 A2MP01023 1474 aa12.5□□□□□ -0.41
TMEM116-205ENST00000547878 VWDEQ8N2E2 1590 aa12.5□□□□□ -0.41
TMEM116-205ENST00000547878 INO80Q9ULG1 1556 aaPredicted RBP12.5□□□□□ -0.41
TMEM116-205ENST00000547878 FYCO1Q9BQS8 1478 aa12.5□□□□□ -0.41
TMEM116-205ENST00000547878 MIER1Q8N108 512 aa12.49□□□□□ -0.41
TMEM116-205ENST00000547878 RGS17Q9UGC6 210 aaPredicted RBP12.49□□□□□ -0.41
TMEM116-205ENST00000547878 UBE2Q2Q8WVN8 375 aa12.48□□□□□ -0.41
TMEM116-205ENST00000547878 GPATCH8Q9UKJ3 1502 aaKnown RBP12.47□□□□□ -0.41
TMEM116-205ENST00000547878 FBXO31Q5XUX0 539 aaPredicted RBP12.47□□□□□ -0.41
TMEM116-205ENST00000547878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.47□□□□□ -0.41
TMEM116-205ENST00000547878 STRCP1A6NGW2 1772 aa12.45□□□□□ -0.42
TMEM116-205ENST00000547878 CASKIN1Q8WXD9 1431 aa12.45□□□□□ -0.42
TMEM116-205ENST00000547878 CCDC18Q5T9S5 1454 aa12.45□□□□□ -0.42
TMEM116-205ENST00000547878 RAB3GAP2Q9H2M9 1393 aa12.44□□□□□ -0.42
TMEM116-205ENST00000547878 TNRQ92752 1358 aa12.43□□□□□ -0.42
TMEM116-205ENST00000547878 KIAA1107Q9UPP5 1409 aa12.43□□□□□ -0.42
TMEM116-205ENST00000547878 LRRC7Q96NW7 1537 aa12.42□□□□□ -0.42
TMEM116-205ENST00000547878 SETD5Q9C0A6 1442 aa12.42□□□□□ -0.42
TMEM116-205ENST00000547878 ADGBQ8N7X0 1667 aa12.42□□□□□ -0.42
TMEM116-205ENST00000547878 NPHP4O75161 1426 aaPredicted RBP12.41□□□□□ -0.42
TMEM116-205ENST00000547878 ANKLE2Q86XL3 938 aa12.41□□□□□ -0.42
TMEM116-205ENST00000547878 MED14O60244 1454 aa12.41□□□□□ -0.42
TMEM116-205ENST00000547878 PZPP20742 1482 aa12.39□□□□□ -0.43
TMEM116-205ENST00000547878 DEPDC5O75140 1603 aa12.39□□□□□ -0.43
TMEM116-205ENST00000547878 ZNF644Q9H582 1327 aaPredicted RBP12.39□□□□□ -0.43
TMEM116-205ENST00000547878 POTEAQ6S8J7 498 aa12.39□□□□□ -0.43
TMEM116-205ENST00000547878 CFDP1Q9UEE9 299 aaPredicted RBP12.39□□□□□ -0.43
TMEM116-205ENST00000547878 RNF17Q9BXT8 1623 aaKnown RBP12.39□□□□□ -0.43
TMEM116-205ENST00000547878 IQGAP1P46940 1657 aa12.38□□□□□ -0.43
TMEM116-205ENST00000547878 PLEKHH2Q8IVE3 1493 aa12.38□□□□□ -0.43
TMEM116-205ENST00000547878 UGGT1Q9NYU2 1555 aa12.37□□□□□ -0.43
TMEM116-205ENST00000547878 THEMISQ8N1K5 641 aaPredicted RBP12.37□□□□□ -0.43
TMEM116-205ENST00000547878 KDM5DQ9BY66 1539 aa12.37□□□□□ -0.43
TMEM116-205ENST00000547878 DHX29Q7Z478 1369 aaKnown RBP12.36□□□□□ -0.43
TMEM116-205ENST00000547878 MBD5Q9P267 1494 aa12.36□□□□□ -0.43
TMEM116-205ENST00000547878 MIA2Q96PC5 1412 aa12.36□□□□□ -0.43
TMEM116-205ENST00000547878 YTHDC1Q96MU7 727 aaKnown RBP12.36□□□□□ -0.43
TMEM116-205ENST00000547878 TIMELESSQ9UNS1 1208 aa12.36□□□□□ -0.43
TMEM116-205ENST00000547878 KIF3BO15066 747 aa12.35□□□□□ -0.43
TMEM116-205ENST00000547878 SYNMO15061 1565 aa12.35□□□□□ -0.43
TMEM116-205ENST00000547878 FAM135AQ9P2D6 1515 aa12.35□□□□□ -0.43
TMEM116-205ENST00000547878 NLRP1Q9C000 1473 aa12.34□□□□□ -0.43
TMEM116-205ENST00000547878 SETD1AO15047 1707 aaKnown RBP12.34□□□□□ -0.43
TMEM116-205ENST00000547878 ZC3H13Q5T200 1668 aaKnown RBP12.33□□□□□ -0.44
TMEM116-205ENST00000547878 XIRP1Q702N8 1843 aaKnown RBP12.33□□□□□ -0.44
TMEM116-205ENST00000547878 WASHC2CQ9Y4E1 1318 aa12.33□□□□□ -0.44
TMEM116-205ENST00000547878 RTEL1-TNFRSF6BF6WH68 1400 aa12.32□□□□□ -0.44
TMEM116-205ENST00000547878 FGD6Q6ZV73 1430 aa12.31□□□□□ -0.44
TMEM116-205ENST00000547878 ERICH6BQ5W0A0 696 aa12.3□□□□□ -0.44
TMEM116-205ENST00000547878 EHBP1L1Q8N3D4 1523 aa12.3□□□□□ -0.44
TMEM116-205ENST00000547878 HFM1A2PYH4 1435 aa12.29□□□□□ -0.44
TMEM116-205ENST00000547878 MTUS2Q5JR59 1369 aa12.27□□□□□ -0.45
TMEM116-205ENST00000547878 ADRA2BP18089 450 aa12.26□□□□□ -0.45
TMEM116-205ENST00000547878 LTKP29376 864 aa12.26□□□□□ -0.45
TMEM116-205ENST00000547878 FAM135BQ49AJ0 1406 aa12.26□□□□□ -0.45
TMEM116-205ENST00000547878 PTPN23Q9H3S7 1636 aa12.26□□□□□ -0.45
TMEM116-205ENST00000547878 UBR1Q8IWV7 1749 aa12.26□□□□□ -0.45
TMEM116-205ENST00000547878 ERVK-7P63135 1459 aa12.25□□□□□ -0.45
TMEM116-205ENST00000547878 NCOA2Q15596 1464 aa12.25□□□□□ -0.45
TMEM116-205ENST00000547878 SCAF11Q99590 1463 aaKnown RBP12.25□□□□□ -0.45
TMEM116-205ENST00000547878 ABCC3O15438 1527 aa12.25□□□□□ -0.45
TMEM116-205ENST00000547878 CCDC141Q6ZP82 1450 aa12.25□□□□□ -0.45
TMEM116-205ENST00000547878 ITGAEP38570 1179 aa12.25□□□□□ -0.45
TMEM116-205ENST00000547878 MYOM3Q5VTT5 1437 aa12.24□□□□□ -0.45
TMEM116-205ENST00000547878 ROBO1Q9Y6N7 1651 aa12.24□□□□□ -0.45
TMEM116-205ENST00000547878 FAM50AQ14320 339 aaKnown RBP12.23□□□□□ -0.45
TMEM116-205ENST00000547878 RBM33Q96EV2 1170 aaKnown RBP12.23□□□□□ -0.45
TMEM116-205ENST00000547878 CAMSAP2Q08AD1 1489 aa12.22□□□□□ -0.45
TMEM116-205ENST00000547878 ARHGAP23Q9P227 1491 aa12.22□□□□□ -0.45
TMEM116-205ENST00000547878 SRCAPQ6ZRS2 3230 aa12.21□□□□□ -0.45
TMEM116-205ENST00000547878 GCC2Q8IWJ2 1684 aa12.21□□□□□ -0.45
TMEM116-205ENST00000547878 TMEM94Q12767 1356 aa12.21□□□□□ -0.45
TMEM116-205ENST00000547878 SLIT1O75093 1534 aa12.21□□□□□ -0.45
TMEM116-205ENST00000547878 TXNDC2Q86VQ3 553 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms