RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 DNMT1P26358 1616 aaKnown RBP22.06■■□□□ 1.12
CCDC59-202ENST00000547758 GGT6Q6P531 493 aa22.05■■□□□ 1.12
CCDC59-202ENST00000547758 CFDP1Q9UEE9 299 aaPredicted RBP22.04■■□□□ 1.12
CCDC59-202ENST00000547758 A2ML1A8K2U0 1454 aa22.03■■□□□ 1.12
CCDC59-202ENST00000547758 CCNB3Q8WWL7 1395 aa22.01■■□□□ 1.11
CCDC59-202ENST00000547758 MED1Q15648 1581 aaPredicted RBP21.99■■□□□ 1.11
CCDC59-202ENST00000547758 NEURL4Q96JN8 1562 aa21.99■■□□□ 1.11
CCDC59-202ENST00000547758 CPS1P31327 1500 aa21.98■■□□□ 1.11
CCDC59-202ENST00000547758 TIAM1Q13009 1591 aa21.96■■□□□ 1.11
CCDC59-202ENST00000547758 HSPA1LP34931 641 aa21.94■■□□□ 1.1
CCDC59-202ENST00000547758 MTUS2Q5JR59 1369 aa21.94■■□□□ 1.1
CCDC59-202ENST00000547758 MBD5Q9P267 1494 aa21.93■■□□□ 1.1
CCDC59-202ENST00000547758 SHANK2Q9UPX8 1470 aa21.93■■□□□ 1.1
CCDC59-202ENST00000547758 RTEL1-TNFRSF6BF6WH68 1400 aa21.92■■□□□ 1.1
CCDC59-202ENST00000547758 PIP4K2BP78356 416 aa21.92■■□□□ 1.1
CCDC59-202ENST00000547758 KDM5DQ9BY66 1539 aa21.91■■□□□ 1.1
CCDC59-202ENST00000547758 FAM135AQ9P2D6 1515 aa21.91■■□□□ 1.1
CCDC59-202ENST00000547758 TNRQ92752 1358 aa21.91■■□□□ 1.1
CCDC59-202ENST00000547758 TOM1O60784 492 aa21.91■■□□□ 1.1
CCDC59-202ENST00000547758 PZPP20742 1482 aa21.9■■□□□ 1.1
CCDC59-202ENST00000547758 DHX29Q7Z478 1369 aaKnown RBP21.9■■□□□ 1.1
CCDC59-202ENST00000547758 ZNF644Q9H582 1327 aaPredicted RBP21.9■■□□□ 1.1
CCDC59-202ENST00000547758 RNF216Q9NWF9 866 aaPredicted RBP21.9■■□□□ 1.1
CCDC59-202ENST00000547758 VWDEQ8N2E2 1590 aa21.89■■□□□ 1.09
CCDC59-202ENST00000547758 EHBP1L1Q8N3D4 1523 aa21.89■■□□□ 1.09
CCDC59-202ENST00000547758 CACNB1Q02641 598 aaPredicted RBP21.88■■□□□ 1.09
CCDC59-202ENST00000547758 FBXO31Q5XUX0 539 aaPredicted RBP21.87■■□□□ 1.09
CCDC59-202ENST00000547758 DEPDC5O75140 1603 aa21.86■■□□□ 1.09
CCDC59-202ENST00000547758 ALKQ9UM73 1620 aa21.84■■□□□ 1.09
CCDC59-202ENST00000547758 KIF3BO15066 747 aa21.84■■□□□ 1.09
CCDC59-202ENST00000547758 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.84■■□□□ 1.09
CCDC59-202ENST00000547758 IQGAP1P46940 1657 aa21.83■■□□□ 1.09
CCDC59-202ENST00000547758 CCDC141Q6ZP82 1450 aa21.83■■□□□ 1.08
CCDC59-202ENST00000547758 NLRP1Q9C000 1473 aa21.83■■□□□ 1.08
CCDC59-202ENST00000547758 UGGT1Q9NYU2 1555 aa21.82■■□□□ 1.08
CCDC59-202ENST00000547758 CEP162Q5TB80 1403 aa21.82■■□□□ 1.08
CCDC59-202ENST00000547758 ANKLE2Q86XL3 938 aa21.82■■□□□ 1.08
CCDC59-202ENST00000547758 MED14O60244 1454 aa21.82■■□□□ 1.08
CCDC59-202ENST00000547758 STRCP1A6NGW2 1772 aa21.81■■□□□ 1.08
CCDC59-202ENST00000547758 NPHP4O75161 1426 aaPredicted RBP21.8■■□□□ 1.08
CCDC59-202ENST00000547758 THEMISQ8N1K5 641 aaPredicted RBP21.8■■□□□ 1.08
CCDC59-202ENST00000547758 MIA2Q96PC5 1412 aa21.8■■□□□ 1.08
CCDC59-202ENST00000547758 WASHC2CQ9Y4E1 1318 aa21.8■■□□□ 1.08
CCDC59-202ENST00000547758 CAMSAP2Q08AD1 1489 aa21.79■■□□□ 1.08
CCDC59-202ENST00000547758 SYNMO15061 1565 aa21.77■■□□□ 1.08
CCDC59-202ENST00000547758 RNF17Q9BXT8 1623 aaKnown RBP21.77■■□□□ 1.07
CCDC59-202ENST00000547758 ZC3H13Q5T200 1668 aaKnown RBP21.75■■□□□ 1.07
CCDC59-202ENST00000547758 ARHGEF5Q12774 1597 aa21.74■■□□□ 1.07
CCDC59-202ENST00000547758 NCOA2Q15596 1464 aa21.72■■□□□ 1.07
CCDC59-202ENST00000547758 LRRC7Q96NW7 1537 aa21.72■■□□□ 1.07
CCDC59-202ENST00000547758 RSPH4AQ5TD94 716 aa21.72■■□□□ 1.07
CCDC59-202ENST00000547758 CFAP65Q6ZU64 1925 aaKnown RBP21.72■■□□□ 1.07
CCDC59-202ENST00000547758 ABCC3O15438 1527 aa21.7■■□□□ 1.06
CCDC59-202ENST00000547758 UBR1Q8IWV7 1749 aa21.69■■□□□ 1.06
CCDC59-202ENST00000547758 CEP152O94986 1710 aa21.67■■□□□ 1.06
CCDC59-202ENST00000547758 EIF2AK4Q9P2K8 1649 aaKnown RBP21.67■■□□□ 1.06
CCDC59-202ENST00000547758 ERVK-7P63135 1459 aa21.66■■□□□ 1.06
CCDC59-202ENST00000547758 XIRP1Q702N8 1843 aaKnown RBP21.65■■□□□ 1.06
CCDC59-202ENST00000547758 RNF39Q9H2S5 420 aa21.65■■□□□ 1.06
CCDC59-202ENST00000547758 MAST1Q9Y2H9 1570 aa21.65■■□□□ 1.06
CCDC59-202ENST00000547758 TSPY4P0CV99 314 aa21.64■■□□□ 1.05
CCDC59-202ENST00000547758 TSPY10P0CW01 314 aa21.64■■□□□ 1.05
CCDC59-202ENST00000547758 MROH1Q8NDA8 1641 aa21.63■■□□□ 1.05
CCDC59-202ENST00000547758 SCAF11Q99590 1463 aaKnown RBP21.6■■□□□ 1.05
CCDC59-202ENST00000547758 SLIT1O75093 1534 aa21.56■■□□□ 1.04
CCDC59-202ENST00000547758 NCBP3Q53F19 620 aaKnown RBP21.56■■□□□ 1.04
CCDC59-202ENST00000547758 ARHGAP23Q9P227 1491 aa21.56■■□□□ 1.04
CCDC59-202ENST00000547758 RGS17Q9UGC6 210 aaPredicted RBP21.54■■□□□ 1.04
CCDC59-202ENST00000547758 DUOX2Q9NRD8 1548 aa21.51■■□□□ 1.03
CCDC59-202ENST00000547758 LTKP29376 864 aa21.51■■□□□ 1.03
CCDC59-202ENST00000547758 LRRC9Q6ZRR7 1453 aa21.51■■□□□ 1.03
CCDC59-202ENST00000547758 PRDM15P57071 1507 aaPredicted RBP21.5■■□□□ 1.03
CCDC59-202ENST00000547758 TXNDC2Q86VQ3 553 aa21.5■■□□□ 1.03
CCDC59-202ENST00000547758 PIK3C2BO00750 1634 aa21.5■■□□□ 1.03
CCDC59-202ENST00000547758 ARHGAP31Q2M1Z3 1444 aa21.48■■□□□ 1.03
CCDC59-202ENST00000547758 FAM135BQ49AJ0 1406 aa21.46■■□□□ 1.03
CCDC59-202ENST00000547758 EID1Q9Y6B2 187 aa21.46■■□□□ 1.03
CCDC59-202ENST00000547758 CROCC2H7BZ55 1655 aa21.46■■□□□ 1.03
CCDC59-202ENST00000547758 KDM5AP29375 1690 aaKnown RBP21.46■■□□□ 1.03
CCDC59-202ENST00000547758 ROBO1Q9Y6N7 1651 aa21.46■■□□□ 1.03
CCDC59-202ENST00000547758 MYOM3Q5VTT5 1437 aa21.43■■□□□ 1.02
CCDC59-202ENST00000547758 TMEM2Q9UHN6 1383 aa21.42■■□□□ 1.02
CCDC59-202ENST00000547758 MAP3K1Q13233 1512 aa21.41■■□□□ 1.02
CCDC59-202ENST00000547758 ERBINQ96RT1 1412 aa21.41■■□□□ 1.02
CCDC59-202ENST00000547758 EFCAB6Q5THR3 1501 aa21.4■■□□□ 1.02
CCDC59-202ENST00000547758 VPS8Q8N3P4 1428 aa21.4■■□□□ 1.02
CCDC59-202ENST00000547758 TMEM94Q12767 1356 aa21.4■■□□□ 1.02
CCDC59-202ENST00000547758 KIF15Q9NS87 1388 aa21.4■■□□□ 1.02
CCDC59-202ENST00000547758 POTEAQ6S8J7 498 aa21.39■■□□□ 1.01
CCDC59-202ENST00000547758 SETD1AO15047 1707 aaKnown RBP21.38■■□□□ 1.01
CCDC59-202ENST00000547758 TET3O43151 1660 aa21.37■■□□□ 1.01
CCDC59-202ENST00000547758 STAG3Q9UJ98 1225 aa21.37■■□□□ 1.01
CCDC59-202ENST00000547758 NWD1Q149M9 1564 aa21.36■■□□□ 1.01
CCDC59-202ENST00000547758 PHLPP1O60346 1717 aa21.35■■□□□ 1.01
CCDC59-202ENST00000547758 KCNA6P17658 529 aa21.35■■□□□ 1.01
CCDC59-202ENST00000547758 KANK4Q5T7N3 995 aaPredicted RBP21.35■■□□□ 1.01
CCDC59-202ENST00000547758 NKTRP30414 1462 aaKnown RBP21.34■■□□□ 1.01
CCDC59-202ENST00000547758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.34■■□□□ 1.014e-6■□□□□ 11.1
CCDC59-202ENST00000547758 KANK1Q14678 1352 aa21.34■■□□□ 1.01
CCDC59-202ENST00000547758 ABCC5O15440 1437 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms