RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 AGLP35573 1532 aa23.38■■□□□ 1.33
TRAFD1-203ENST00000547063 KDM5DQ9BY66 1539 aa23.36■■□□□ 1.33
TRAFD1-203ENST00000547063 DEPDC5O75140 1603 aa23.36■■□□□ 1.33
TRAFD1-203ENST00000547063 RNF17Q9BXT8 1623 aaKnown RBP23.35■■□□□ 1.33
TRAFD1-203ENST00000547063 NUP155O75694 1391 aa23.35■■□□□ 1.33
TRAFD1-203ENST00000547063 KANK1Q14678 1352 aa23.35■■□□□ 1.33
TRAFD1-203ENST00000547063 PRDM15P57071 1507 aaPredicted RBP23.32■■□□□ 1.32
TRAFD1-203ENST00000547063 DHX57Q6P158 1386 aaKnown RBP23.31■■□□□ 1.32
TRAFD1-203ENST00000547063 CCER1Q8TC90 406 aaPredicted RBP23.31■■□□□ 1.32
TRAFD1-203ENST00000547063 IQGAP3Q86VI3 1631 aa23.3■■□□□ 1.32
TRAFD1-203ENST00000547063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.3■■□□□ 1.325e-6■■■□□ 14.8
TRAFD1-203ENST00000547063 MPHOSPH9Q99550 1183 aa23.28■■□□□ 1.32
TRAFD1-203ENST00000547063 SLC4A1APQ9BWU0 796 aaKnown RBP23.28■■□□□ 1.32
TRAFD1-203ENST00000547063 PPP6R1Q9UPN7 881 aa23.28■■□□□ 1.32
TRAFD1-203ENST00000547063 CLSPNQ9HAW4 1339 aa23.28■■□□□ 1.32
TRAFD1-203ENST00000547063 FAM135AQ9P2D6 1515 aa23.28■■□□□ 1.32
TRAFD1-203ENST00000547063 PZPP20742 1482 aa23.27■■□□□ 1.32
TRAFD1-203ENST00000547063 MROH1Q8NDA8 1641 aa23.26■■□□□ 1.31
TRAFD1-203ENST00000547063 GGT6Q6P531 493 aa23.26■■□□□ 1.31
TRAFD1-203ENST00000547063 VWDEQ8N2E2 1590 aa23.26■■□□□ 1.31
TRAFD1-203ENST00000547063 ARID4BQ4LE39 1312 aaPredicted RBP23.24■■□□□ 1.31
TRAFD1-203ENST00000547063 ZC3H13Q5T200 1668 aaKnown RBP23.22■■□□□ 1.31
TRAFD1-203ENST00000547063 LMTK2Q8IWU2 1503 aa23.21■■□□□ 1.31
TRAFD1-203ENST00000547063 SIGLEC1Q9BZZ2 1709 aa23.21■■□□□ 1.31
TRAFD1-203ENST00000547063 TET3O43151 1660 aa23.2■■□□□ 1.3
TRAFD1-203ENST00000547063 WASHC2CQ9Y4E1 1318 aa23.2■■□□□ 1.3
TRAFD1-203ENST00000547063 PKD2Q13563 968 aa23.18■■□□□ 1.3
TRAFD1-203ENST00000547063 ABCC3O15438 1527 aa23.16■■□□□ 1.3
TRAFD1-203ENST00000547063 CEP152O94986 1710 aa23.16■■□□□ 1.3
TRAFD1-203ENST00000547063 ESF1Q9H501 851 aaKnown RBP23.15■■□□□ 1.3
TRAFD1-203ENST00000547063 EFCAB6Q5THR3 1501 aa23.13■■□□□ 1.29
TRAFD1-203ENST00000547063 MLECQ14165 292 aa23.13■■□□□ 1.29
TRAFD1-203ENST00000547063 RPRD2Q5VT52 1461 aaKnown RBP23.12■■□□□ 1.29
TRAFD1-203ENST00000547063 CAMSAP1Q5T5Y3 1602 aa23.11■■□□□ 1.29
TRAFD1-203ENST00000547063 CNTLNQ9NXG0 1405 aa23.11■■□□□ 1.29
TRAFD1-203ENST00000547063 E9PCH4 1651 aa23.1■■□□□ 1.29
TRAFD1-203ENST00000547063 ARHGAP31Q2M1Z3 1444 aa23.1■■□□□ 1.29
TRAFD1-203ENST00000547063 ANKRD30BQ9BXX2 1392 aa23.08■■□□□ 1.29
TRAFD1-203ENST00000547063 CLTCQ00610 1675 aaKnown RBP23.06■■□□□ 1.28
TRAFD1-203ENST00000547063 FOXD1Q16676 465 aa23.06■■□□□ 1.28
TRAFD1-203ENST00000547063 MROH2AA6NES4 1674 aa23.04■■□□□ 1.28
TRAFD1-203ENST00000547063 ZEB1P37275 1124 aaPredicted RBP23.04■■□□□ 1.28
TRAFD1-203ENST00000547063 NPATQ14207 1427 aa23.03■■□□□ 1.28
TRAFD1-203ENST00000547063 FER1L4A9Z1Z3 1794 aa23.03■■□□□ 1.28
TRAFD1-203ENST00000547063 SPHKAPQ2M3C7 1700 aa23.02■■□□□ 1.28
TRAFD1-203ENST00000547063 PTPRTO14522 1441 aa23.01■■□□□ 1.27
TRAFD1-203ENST00000547063 CCDC144AA2RUR9 1427 aa22.99■■□□□ 1.27
TRAFD1-203ENST00000547063 TRPM2O94759 1503 aa22.99■■□□□ 1.27
TRAFD1-203ENST00000547063 ZMYM3Q14202 1370 aa22.99■■□□□ 1.27
TRAFD1-203ENST00000547063 ADAMTSL3P82987 1691 aa22.97■■□□□ 1.27
TRAFD1-203ENST00000547063 TIMELESSQ9UNS1 1208 aa22.97■■□□□ 1.27
TRAFD1-203ENST00000547063 PLA2R1Q13018 1463 aa22.97■■□□□ 1.27
TRAFD1-203ENST00000547063 NOS1P29475 1434 aa22.95■■□□□ 1.26
TRAFD1-203ENST00000547063 NEUROD1Q13562 356 aa22.95■■□□□ 1.26
TRAFD1-203ENST00000547063 PREX1Q8TCU6 1659 aa22.95■■□□□ 1.26
TRAFD1-203ENST00000547063 SIN3AQ96ST3 1273 aa22.95■■□□□ 1.26
TRAFD1-203ENST00000547063 CFAP65Q6ZU64 1925 aaKnown RBP22.94■■□□□ 1.26
TRAFD1-203ENST00000547063 MADDQ8WXG6 1647 aa22.93■■□□□ 1.26
TRAFD1-203ENST00000547063 ERVK-7P63135 1459 aa22.92■■□□□ 1.26
TRAFD1-203ENST00000547063 SPATA31D1Q6ZQQ2 1576 aa22.91■■□□□ 1.26
TRAFD1-203ENST00000547063 TONSLQ96HA7 1378 aa22.9■■□□□ 1.26
TRAFD1-203ENST00000547063 SLC52A1Q9NWF4 448 aa22.9■■□□□ 1.26
TRAFD1-203ENST00000547063 RIMS1Q86UR5 1692 aaKnown RBP22.9■■□□□ 1.26
TRAFD1-203ENST00000547063 C3P01024 1663 aa22.89■■□□□ 1.25
TRAFD1-203ENST00000547063 CLTCL1P53675 1640 aa22.87■■□□□ 1.25
TRAFD1-203ENST00000547063 SYNMO15061 1565 aa22.87■■□□□ 1.25
TRAFD1-203ENST00000547063 FBXO31Q5XUX0 539 aaPredicted RBP22.86■■□□□ 1.25
TRAFD1-203ENST00000547063 PIK3C2BO00750 1634 aa22.86■■□□□ 1.25
TRAFD1-203ENST00000547063 KIF1BO60333 1816 aa22.85■■□□□ 1.25
TRAFD1-203ENST00000547063 NEURL4Q96JN8 1562 aa22.84■■□□□ 1.25
TRAFD1-203ENST00000547063 TNRQ92752 1358 aa22.83■■□□□ 1.25
TRAFD1-203ENST00000547063 UGGT1Q9NYU2 1555 aa22.8■■□□□ 1.24
TRAFD1-203ENST00000547063 CEBPAP49715 358 aaPredicted RBP22.79■■□□□ 1.24
TRAFD1-203ENST00000547063 SPATA31E1Q6ZUB1 1445 aa22.79■■□□□ 1.24
TRAFD1-203ENST00000547063 NLRP1Q9C000 1473 aa22.79■■□□□ 1.24
TRAFD1-203ENST00000547063 IDI1Q13907 227 aa22.78■■□□□ 1.24
TRAFD1-203ENST00000547063 PTPRMP28827 1452 aa22.78■■□□□ 1.24
TRAFD1-203ENST00000547063 STAC3Q96MF2 364 aa22.77■■□□□ 1.24
TRAFD1-203ENST00000547063 L3MBTL2Q969R5 705 aa22.76■■□□□ 1.23
TRAFD1-203ENST00000547063 ADGRB3O60242 1522 aa22.76■■□□□ 1.23
TRAFD1-203ENST00000547063 CHGAP10645 457 aaKnown RBP22.75■■□□□ 1.23
TRAFD1-203ENST00000547063 KDM5AP29375 1690 aaKnown RBP22.74■■□□□ 1.23
TRAFD1-203ENST00000547063 SETD1BQ9UPS6 1966 aaKnown RBP22.74■■□□□ 1.23
TRAFD1-203ENST00000547063 RGL3Q3MIN7 710 aa22.74■■□□□ 1.23
TRAFD1-203ENST00000547063 STAG3Q9UJ98 1225 aa22.74■■□□□ 1.23
TRAFD1-203ENST00000547063 RPGRIP1LQ68CZ1 1315 aa22.73■■□□□ 1.23
TRAFD1-203ENST00000547063 PLPPR3Q6T4P5 718 aa22.72■■□□□ 1.23
TRAFD1-203ENST00000547063 TMEM131LA2VDJ0 1609 aa22.71■■□□□ 1.23
TRAFD1-203ENST00000547063 PPP1R15AO75807 674 aaPredicted RBP22.71■■□□□ 1.23
TRAFD1-203ENST00000547063 ZNF326Q5BKZ1 582 aaKnown RBP22.7■■□□□ 1.22
TRAFD1-203ENST00000547063 DCAF11Q8TEB1 546 aa22.69■■□□□ 1.22
TRAFD1-203ENST00000547063 MYO3AQ8NEV4 1616 aa22.68■■□□□ 1.22
TRAFD1-203ENST00000547063 KDM4FA0A1W2PPD8 638 aa22.67■■□□□ 1.22
TRAFD1-203ENST00000547063 A2ML1A8K2U0 1454 aa22.66■■□□□ 1.22
TRAFD1-203ENST00000547063 MYO5BQ9ULV0 1848 aa22.65■■□□□ 1.22
TRAFD1-203ENST00000547063 UBR1Q8IWV7 1749 aa22.65■■□□□ 1.22
TRAFD1-203ENST00000547063 HDGFP51858 240 aaKnown RBP22.64■■□□□ 1.21
TRAFD1-203ENST00000547063 IFT172Q9UG01 1749 aa22.64■■□□□ 1.21
TRAFD1-203ENST00000547063 MYOM2P54296 1465 aa22.63■■□□□ 1.21
TRAFD1-203ENST00000547063 KDM2AQ9Y2K7 1162 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms