RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 ROCK1Q13464 1354 aa38.71■■■■□ 3.79
NKX2-1-205ENST00000546983 MROH2AA6NES4 1674 aa38.63■■■■□ 3.77
NKX2-1-205ENST00000546983 WASHC2CQ9Y4E1 1318 aa38.62■■■■□ 3.77
NKX2-1-205ENST00000546983 RNF17Q9BXT8 1623 aaKnown RBP38.6■■■■□ 3.77
NKX2-1-205ENST00000546983 ZMYM3Q14202 1370 aa38.6■■■■□ 3.77
NKX2-1-205ENST00000546983 KDM5DQ9BY66 1539 aa38.58■■■■□ 3.77
NKX2-1-205ENST00000546983 PTPRKQ15262 1439 aa38.55■■■■□ 3.76
NKX2-1-205ENST00000546983 ANKRD50Q9ULJ7 1429 aa38.55■■■■□ 3.76
NKX2-1-205ENST00000546983 KANK1Q14678 1352 aa38.55■■■■□ 3.76
NKX2-1-205ENST00000546983 NPATQ14207 1427 aa38.55■■■■□ 3.76
NKX2-1-205ENST00000546983 ITGAEP38570 1179 aa38.54■■■■□ 3.76
NKX2-1-205ENST00000546983 CEBPAP49715 358 aaPredicted RBP38.51■■■■□ 3.76
NKX2-1-205ENST00000546983 PLPPR3Q6T4P5 718 aa38.51■■■■□ 3.76
NKX2-1-205ENST00000546983 CLTCQ00610 1675 aaKnown RBP38.49■■■■□ 3.75
NKX2-1-205ENST00000546983 ZC3H13Q5T200 1668 aaKnown RBP38.49■■■■□ 3.75
NKX2-1-205ENST00000546983 C3P01024 1663 aa38.48■■■■□ 3.75
NKX2-1-205ENST00000546983 PRDM15P57071 1507 aaPredicted RBP38.47■■■■□ 3.75
NKX2-1-205ENST00000546983 SETD1BQ9UPS6 1966 aaKnown RBP38.44■■■■□ 3.74
NKX2-1-205ENST00000546983 DEPDC5O75140 1603 aa38.42■■■■□ 3.74
NKX2-1-205ENST00000546983 UHRF1BP1Q6BDS2 1440 aa38.41■■■■□ 3.74
NKX2-1-205ENST00000546983 ABCC3O15438 1527 aa38.4■■■■□ 3.74
NKX2-1-205ENST00000546983 PZPP20742 1482 aa38.4■■■■□ 3.74
NKX2-1-205ENST00000546983 MROH1Q8NDA8 1641 aa38.39■■■■□ 3.74
NKX2-1-205ENST00000546983 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.37■■■■□ 3.73
NKX2-1-205ENST00000546983 PREX1Q8TCU6 1659 aa38.35■■■■□ 3.73
NKX2-1-205ENST00000546983 LMTK3Q96Q04 1460 aa38.34■■■■□ 3.73
NKX2-1-205ENST00000546983 ARHGAP31Q2M1Z3 1444 aa38.33■■■■□ 3.73
NKX2-1-205ENST00000546983 LMTK2Q8IWU2 1503 aa38.31■■■■□ 3.72
NKX2-1-205ENST00000546983 HFM1A2PYH4 1435 aa38.29■■■■□ 3.72
NKX2-1-205ENST00000546983 VWDEQ8N2E2 1590 aa38.28■■■■□ 3.72
NKX2-1-205ENST00000546983 ACIN1Q9UKV3 1341 aaKnown RBP38.28■■■■□ 3.72
NKX2-1-205ENST00000546983 NAIPQ13075 1403 aa38.24■■■■□ 3.71
NKX2-1-205ENST00000546983 TNRQ92752 1358 aa38.24■■■■□ 3.71
NKX2-1-205ENST00000546983 CAMSAP1Q5T5Y3 1602 aa38.23■■■■□ 3.71
NKX2-1-205ENST00000546983 UNC13BO14795 1591 aa38.23■■■■□ 3.71
NKX2-1-205ENST00000546983 CEP152O94986 1710 aa38.18■■■■□ 3.7
NKX2-1-205ENST00000546983 NLRP1Q9C000 1473 aa38.18■■■■□ 3.7
NKX2-1-205ENST00000546983 FBXO31Q5XUX0 539 aaPredicted RBP38.18■■■■□ 3.7
NKX2-1-205ENST00000546983 RPRD2Q5VT52 1461 aaKnown RBP38.17■■■■□ 3.7
NKX2-1-205ENST00000546983 GCC2Q8IWJ2 1684 aa38.17■■■■□ 3.7
NKX2-1-205ENST00000546983 NUP155O75694 1391 aa38.16■■■■□ 3.7
NKX2-1-205ENST00000546983 SPATA31D1Q6ZQQ2 1576 aa38.15■■■■□ 3.7
NKX2-1-205ENST00000546983 ERVK-7P63135 1459 aa38.15■■■■□ 3.7
NKX2-1-205ENST00000546983 A2ML1A8K2U0 1454 aa38.12■■■■□ 3.69
NKX2-1-205ENST00000546983 EFCAB6Q5THR3 1501 aa38.12■■■■□ 3.69
NKX2-1-205ENST00000546983 MYO3AQ8NEV4 1616 aa38.11■■■■□ 3.69
NKX2-1-205ENST00000546983 HSPA2P54652 639 aa38.09■■■■□ 3.69
NKX2-1-205ENST00000546983 ZNF142P52746 1687 aaPredicted RBP38.08■■■■□ 3.69
NKX2-1-205ENST00000546983 IQGAP3Q86VI3 1631 aa38.08■■■■□ 3.69
NKX2-1-205ENST00000546983 TET3O43151 1660 aa38.07■■■■□ 3.69
NKX2-1-205ENST00000546983 CEP170BQ9Y4F5 1589 aaPredicted RBP38.07■■■■□ 3.69
NKX2-1-205ENST00000546983 DMRT2Q9Y5R5 561 aa38.06■■■■□ 3.68
NKX2-1-205ENST00000546983 THEMISQ8N1K5 641 aaPredicted RBP38.03■■■■□ 3.68
NKX2-1-205ENST00000546983 SLC52A1Q9NWF4 448 aa38■■■■□ 3.67
NKX2-1-205ENST00000546983 PLA2R1Q13018 1463 aa38■■■■□ 3.67
NKX2-1-205ENST00000546983 NOS1P29475 1434 aa37.98■■■■□ 3.67
NKX2-1-205ENST00000546983 PKD2Q13563 968 aa37.96■■■■□ 3.67
NKX2-1-205ENST00000546983 TRIM52Q96A61 297 aa37.96■■■■□ 3.67
NKX2-1-205ENST00000546983 SETD5Q9C0A6 1442 aa37.95■■■■□ 3.67
NKX2-1-205ENST00000546983 UGGT1Q9NYU2 1555 aa37.94■■■■□ 3.66
NKX2-1-205ENST00000546983 STAG3Q9UJ98 1225 aa37.87■■■■□ 3.65
NKX2-1-205ENST00000546983 HRCP23327 699 aa37.86■■■■□ 3.65
NKX2-1-205ENST00000546983 ANKLE2Q86XL3 938 aa37.84■■■■□ 3.65
NKX2-1-205ENST00000546983 SLC4A1APQ9BWU0 796 aaKnown RBP37.84■■■■□ 3.65
NKX2-1-205ENST00000546983 PTPRTO14522 1441 aa37.84■■■■□ 3.65
NKX2-1-205ENST00000546983 IDI1Q13907 227 aa37.83■■■■□ 3.65
NKX2-1-205ENST00000546983 E9PCH4 1651 aa37.82■■■■□ 3.65
NKX2-1-205ENST00000546983 CFAP65Q6ZU64 1925 aaKnown RBP37.82■■■■□ 3.64
NKX2-1-205ENST00000546983 KDM5AP29375 1690 aaKnown RBP37.81■■■■□ 3.64
NKX2-1-205ENST00000546983 SYNMO15061 1565 aa37.8■■■■□ 3.64
NKX2-1-205ENST00000546983 RAB3GAP2Q9H2M9 1393 aa37.75■■■■□ 3.63
NKX2-1-205ENST00000546983 STRCQ7RTU9 1775 aa37.75■■■■□ 3.63
NKX2-1-205ENST00000546983 HDGFP51858 240 aaKnown RBP37.73■■■■□ 3.63
NKX2-1-205ENST00000546983 EID1Q9Y6B2 187 aa37.73■■■■□ 3.63
NKX2-1-205ENST00000546983 UBR1Q8IWV7 1749 aa37.72■■■■□ 3.63
NKX2-1-205ENST00000546983 PIK3C2BO00750 1634 aa37.71■■■■□ 3.63
NKX2-1-205ENST00000546983 NCKAP5LQ9HCH0 1330 aa37.7■■■■□ 3.63
NKX2-1-205ENST00000546983 ADGRB3O60242 1522 aa37.69■■■■□ 3.62
NKX2-1-205ENST00000546983 SLIT1O75093 1534 aa37.69■■■■□ 3.62
NKX2-1-205ENST00000546983 MPHOSPH9Q99550 1183 aa37.68■■■■□ 3.62
NKX2-1-205ENST00000546983 TMEM2Q9UHN6 1383 aa37.68■■■■□ 3.62
NKX2-1-205ENST00000546983 ARHGAP23Q9P227 1491 aa37.66■■■■□ 3.62
NKX2-1-205ENST00000546983 MED14O60244 1454 aa37.64■■■■□ 3.62
NKX2-1-205ENST00000546983 SPHKAPQ2M3C7 1700 aa37.64■■■■□ 3.62
NKX2-1-205ENST00000546983 TRPM2O94759 1503 aa37.62■■■■□ 3.61
NKX2-1-205ENST00000546983 SCAF11Q99590 1463 aaKnown RBP37.62■■■■□ 3.61
NKX2-1-205ENST00000546983 TXNDC2Q86VQ3 553 aa37.61■■■■□ 3.61
NKX2-1-205ENST00000546983 POLR1AO95602 1720 aaPredicted RBP37.61■■■■□ 3.61
NKX2-1-205ENST00000546983 TRIM26Q12899 539 aaPredicted RBP37.59■■■■□ 3.61
NKX2-1-205ENST00000546983 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.59■■■■□ 3.61
NKX2-1-205ENST00000546983 NPHP4O75161 1426 aaPredicted RBP37.58■■■■□ 3.61
NKX2-1-205ENST00000546983 CHGAP10645 457 aaKnown RBP37.57■■■■□ 3.6
NKX2-1-205ENST00000546983 TMEM131LA2VDJ0 1609 aa37.54■■■■□ 3.6
NKX2-1-205ENST00000546983 NEURL4Q96JN8 1562 aa37.51■■■■□ 3.6
NKX2-1-205ENST00000546983 LTKP29376 864 aa37.49■■■■□ 3.59
NKX2-1-205ENST00000546983 CCDC144AA2RUR9 1427 aa37.47■■■■□ 3.59
NKX2-1-205ENST00000546983 RIMS2Q9UQ26 1411 aa37.46■■■■□ 3.59
NKX2-1-205ENST00000546983 PPP1R15AO75807 674 aaPredicted RBP37.46■■■■□ 3.59
NKX2-1-205ENST00000546983 ZFYVE9O95405 1425 aa37.44■■■■□ 3.58
NKX2-1-205ENST00000546983 IQGAP1P46940 1657 aa37.44■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms