RNA–Protein interactions for RNA: ENST00000546498.1

PKP2-203, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-203ENST00000546498 WASHC2CQ9Y4E1 1318 aa20.38■□□□□ 0.85
PKP2-203ENST00000546498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.38■□□□□ 0.85
PKP2-203ENST00000546498 FER1L4A9Z1Z3 1794 aa20.38■□□□□ 0.85
PKP2-203ENST00000546498 KANK1Q14678 1352 aa20.37■□□□□ 0.85
PKP2-203ENST00000546498 HFM1A2PYH4 1435 aa20.36■□□□□ 0.85
PKP2-203ENST00000546498 RIMS1Q86UR5 1692 aaKnown RBP20.36■□□□□ 0.85
PKP2-203ENST00000546498 RNF17Q9BXT8 1623 aaKnown RBP20.36■□□□□ 0.85
PKP2-203ENST00000546498 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
PKP2-203ENST00000546498 PTPRMP28827 1452 aa20.36■□□□□ 0.85
PKP2-203ENST00000546498 FAM135AQ9P2D6 1515 aa20.35■□□□□ 0.85
PKP2-203ENST00000546498 NAIPQ13075 1403 aa20.35■□□□□ 0.85
PKP2-203ENST00000546498 KDM5DQ9BY66 1539 aa20.34■□□□□ 0.85
PKP2-203ENST00000546498 PRDM15P57071 1507 aaPredicted RBP20.31■□□□□ 0.84
PKP2-203ENST00000546498 ZMYM3Q14202 1370 aa20.31■□□□□ 0.84
PKP2-203ENST00000546498 GCC2Q8IWJ2 1684 aa20.29■□□□□ 0.84
PKP2-203ENST00000546498 CLTCQ00610 1675 aaKnown RBP20.29■□□□□ 0.84
PKP2-203ENST00000546498 DEPDC5O75140 1603 aa20.28■□□□□ 0.84
PKP2-203ENST00000546498 MROH1Q8NDA8 1641 aa20.28■□□□□ 0.84
PKP2-203ENST00000546498 CEBPAP49715 358 aaPredicted RBP20.28■□□□□ 0.84
PKP2-203ENST00000546498 ABCC3O15438 1527 aa20.27■□□□□ 0.84
PKP2-203ENST00000546498 ZC3H13Q5T200 1668 aaKnown RBP20.27■□□□□ 0.84
PKP2-203ENST00000546498 TRIM26Q12899 539 aaPredicted RBP20.27■□□□□ 0.84
PKP2-203ENST00000546498 MROH2AA6NES4 1674 aa20.26■□□□□ 0.83
PKP2-203ENST00000546498 NUP155O75694 1391 aa20.26■□□□□ 0.83
PKP2-203ENST00000546498 TRIM52Q96A61 297 aa20.25■□□□□ 0.83
PKP2-203ENST00000546498 SETD5Q9C0A6 1442 aa20.25■□□□□ 0.83
PKP2-203ENST00000546498 ACIN1Q9UKV3 1341 aaKnown RBP20.25■□□□□ 0.83
PKP2-203ENST00000546498 UNC13BO14795 1591 aa20.24■□□□□ 0.83
PKP2-203ENST00000546498 LMTK2Q8IWU2 1503 aa20.22■□□□□ 0.83
PKP2-203ENST00000546498 VWDEQ8N2E2 1590 aa20.21■□□□□ 0.83
PKP2-203ENST00000546498 PZPP20742 1482 aa20.21■□□□□ 0.83
PKP2-203ENST00000546498 C3P01024 1663 aa20.21■□□□□ 0.83
PKP2-203ENST00000546498 NPATQ14207 1427 aa20.2■□□□□ 0.82
PKP2-203ENST00000546498 CEP152O94986 1710 aa20.19■□□□□ 0.82
PKP2-203ENST00000546498 ARHGAP31Q2M1Z3 1444 aa20.19■□□□□ 0.82
PKP2-203ENST00000546498 CAMSAP1Q5T5Y3 1602 aa20.18■□□□□ 0.82
PKP2-203ENST00000546498 RAB3GAP2Q9H2M9 1393 aa20.18■□□□□ 0.82
PKP2-203ENST00000546498 FBXO31Q5XUX0 539 aaPredicted RBP20.16■□□□□ 0.82
PKP2-203ENST00000546498 IQGAP3Q86VI3 1631 aa20.16■□□□□ 0.82
PKP2-203ENST00000546498 TNRQ92752 1358 aa20.15■□□□□ 0.82
PKP2-203ENST00000546498 EFCAB6Q5THR3 1501 aa20.15■□□□□ 0.82
PKP2-203ENST00000546498 UHRF1BP1Q6BDS2 1440 aa20.14■□□□□ 0.81
PKP2-203ENST00000546498 SLC4A1APQ9BWU0 796 aaKnown RBP20.14■□□□□ 0.81
PKP2-203ENST00000546498 TET3O43151 1660 aa20.13■□□□□ 0.81
PKP2-203ENST00000546498 RPRD2Q5VT52 1461 aaKnown RBP20.13■□□□□ 0.81
PKP2-203ENST00000546498 ERVK-7P63135 1459 aa20.12■□□□□ 0.81
PKP2-203ENST00000546498 HRCP23327 699 aa20.12■□□□□ 0.81
PKP2-203ENST00000546498 SETD1BQ9UPS6 1966 aaKnown RBP20.1■□□□□ 0.81
PKP2-203ENST00000546498 SPATA31D1Q6ZQQ2 1576 aa20.09■□□□□ 0.81
PKP2-203ENST00000546498 PREX1Q8TCU6 1659 aa20.07■□□□□ 0.8
PKP2-203ENST00000546498 PKD2Q13563 968 aa20.07■□□□□ 0.8
PKP2-203ENST00000546498 MPHOSPH9Q99550 1183 aa20.07■□□□□ 0.8
PKP2-203ENST00000546498 NLRP1Q9C000 1473 aa20.06■□□□□ 0.8
PKP2-203ENST00000546498 LMTK3Q96Q04 1460 aa20.05■□□□□ 0.8
PKP2-203ENST00000546498 NOS1P29475 1434 aa20.04■□□□□ 0.8
PKP2-203ENST00000546498 MYO3AQ8NEV4 1616 aa20.03■□□□□ 0.8
PKP2-203ENST00000546498 SLC52A1Q9NWF4 448 aa20.03■□□□□ 0.8
PKP2-203ENST00000546498 E9PCH4 1651 aa20.03■□□□□ 0.8
PKP2-203ENST00000546498 CFAP65Q6ZU64 1925 aaKnown RBP20.02■□□□□ 0.8
PKP2-203ENST00000546498 STAG3Q9UJ98 1225 aa20.02■□□□□ 0.8
PKP2-203ENST00000546498 A2ML1A8K2U0 1454 aa20.02■□□□□ 0.8
PKP2-203ENST00000546498 PCGF6Q9BYE7 350 aa20.01■□□□□ 0.79
PKP2-203ENST00000546498 CEP170BQ9Y4F5 1589 aaPredicted RBP20■□□□□ 0.79
PKP2-203ENST00000546498 HSPA2P54652 639 aa19.99■□□□□ 0.79
PKP2-203ENST00000546498 IDI1Q13907 227 aa19.98■□□□□ 0.79
PKP2-203ENST00000546498 THEMISQ8N1K5 641 aaPredicted RBP19.98■□□□□ 0.79
PKP2-203ENST00000546498 SYNMO15061 1565 aa19.97■□□□□ 0.79
PKP2-203ENST00000546498 PTPRTO14522 1441 aa19.97■□□□□ 0.79
PKP2-203ENST00000546498 FOXD1Q16676 465 aa19.97■□□□□ 0.79
PKP2-203ENST00000546498 UGGT1Q9NYU2 1555 aa19.96■□□□□ 0.79
PKP2-203ENST00000546498 ZNF142P52746 1687 aaPredicted RBP19.96■□□□□ 0.79
PKP2-203ENST00000546498 CHGAP10645 457 aaKnown RBP19.95■□□□□ 0.78
PKP2-203ENST00000546498 SPHKAPQ2M3C7 1700 aa19.93■□□□□ 0.78
PKP2-203ENST00000546498 TRPM2O94759 1503 aa19.93■□□□□ 0.78
PKP2-203ENST00000546498 CCDC144AA2RUR9 1427 aa19.91■□□□□ 0.78
PKP2-203ENST00000546498 ADGRB3O60242 1522 aa19.9■□□□□ 0.78
PKP2-203ENST00000546498 PIK3C2BO00750 1634 aa19.9■□□□□ 0.78
PKP2-203ENST00000546498 PLA2R1Q13018 1463 aa19.89■□□□□ 0.77
PKP2-203ENST00000546498 ANKLE2Q86XL3 938 aa19.88■□□□□ 0.77
PKP2-203ENST00000546498 EID1Q9Y6B2 187 aa19.87■□□□□ 0.77
PKP2-203ENST00000546498 UBR1Q8IWV7 1749 aa19.86■□□□□ 0.77
PKP2-203ENST00000546498 HDGFP51858 240 aaKnown RBP19.86■□□□□ 0.77
PKP2-203ENST00000546498 TMEM2Q9UHN6 1383 aa19.85■□□□□ 0.77
PKP2-203ENST00000546498 KDM5AP29375 1690 aaKnown RBP19.85■□□□□ 0.77
PKP2-203ENST00000546498 ZNF326Q5BKZ1 582 aaKnown RBP19.85■□□□□ 0.77
PKP2-203ENST00000546498 DMRT2Q9Y5R5 561 aa19.85■□□□□ 0.77
PKP2-203ENST00000546498 NCKAP5LQ9HCH0 1330 aa19.84■□□□□ 0.77
PKP2-203ENST00000546498 CLTCL1P53675 1640 aa19.84■□□□□ 0.77
PKP2-203ENST00000546498 ANKRD30BQ9BXX2 1392 aa19.83■□□□□ 0.77
PKP2-203ENST00000546498 TXNDC2Q86VQ3 553 aa19.83■□□□□ 0.77
PKP2-203ENST00000546498 PPP1R15AO75807 674 aaPredicted RBP19.82■□□□□ 0.76
PKP2-203ENST00000546498 TMEM131LA2VDJ0 1609 aa19.82■□□□□ 0.76
PKP2-203ENST00000546498 SLIT1O75093 1534 aa19.81■□□□□ 0.76
PKP2-203ENST00000546498 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.81■□□□□ 0.76
PKP2-203ENST00000546498 ARHGAP23Q9P227 1491 aa19.8■□□□□ 0.76
PKP2-203ENST00000546498 DHX57Q6P158 1386 aaKnown RBP19.8■□□□□ 0.76
PKP2-203ENST00000546498 SCAF11Q99590 1463 aaKnown RBP19.79■□□□□ 0.76
PKP2-203ENST00000546498 RIMS2Q9UQ26 1411 aa19.79■□□□□ 0.76
PKP2-203ENST00000546498 KIF1BO60333 1816 aa19.77■□□□□ 0.76
PKP2-203ENST00000546498 LTKP29376 864 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms