RNA–Protein interactions for RNA: ENST00000546310.1

PHOX2A-203, Transcript of paired like homeobox 2A, humanhuman

TSL 5

Gene PHOX2A, Length 928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-203ENST00000546310 NEURL4Q96JN8 1562 aa40.53■■■■■ 4.08
PHOX2A-203ENST00000546310 DHX29Q7Z478 1369 aaKnown RBP40.53■■■■■ 4.08
PHOX2A-203ENST00000546310 TNRQ92752 1358 aa40.53■■■■■ 4.08
PHOX2A-203ENST00000546310 PIP4K2BP78356 416 aa40.53■■■■■ 4.08
PHOX2A-203ENST00000546310 TOM1O60784 492 aa40.52■■■■■ 4.08
PHOX2A-203ENST00000546310 MED1Q15648 1581 aaPredicted RBP40.52■■■■■ 4.08
PHOX2A-203ENST00000546310 SHANK2Q9UPX8 1470 aa40.51■■■■■ 4.07
PHOX2A-203ENST00000546310 FBXO31Q5XUX0 539 aaPredicted RBP40.49■■■■■ 4.07
PHOX2A-203ENST00000546310 PZPP20742 1482 aa40.46■■■■■ 4.07
PHOX2A-203ENST00000546310 EHBP1L1Q8N3D4 1523 aa40.44■■■■■ 4.06
PHOX2A-203ENST00000546310 KDM5DQ9BY66 1539 aa40.44■■■■■ 4.06
PHOX2A-203ENST00000546310 KIF3BO15066 747 aa40.44■■■■■ 4.06
PHOX2A-203ENST00000546310 FAM135AQ9P2D6 1515 aa40.42■■■■■ 4.06
PHOX2A-203ENST00000546310 ANKLE2Q86XL3 938 aa40.4■■■■■ 4.06
PHOX2A-203ENST00000546310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.38■■■■■ 4.06
PHOX2A-203ENST00000546310 VWDEQ8N2E2 1590 aa40.37■■■■■ 4.05
PHOX2A-203ENST00000546310 CEP162Q5TB80 1403 aa40.37■■■■■ 4.05
PHOX2A-203ENST00000546310 WASHC2CQ9Y4E1 1318 aa40.36■■■■■ 4.05
PHOX2A-203ENST00000546310 CCDC141Q6ZP82 1450 aa40.35■■■■■ 4.05
PHOX2A-203ENST00000546310 THEMISQ8N1K5 641 aaPredicted RBP40.35■■■■■ 4.05
PHOX2A-203ENST00000546310 MIA2Q96PC5 1412 aa40.33■■■■■ 4.05
PHOX2A-203ENST00000546310 NLRP1Q9C000 1473 aa40.32■■■■■ 4.05
PHOX2A-203ENST00000546310 NPHP4O75161 1426 aaPredicted RBP40.31■■■■■ 4.04
PHOX2A-203ENST00000546310 MED14O60244 1454 aa40.3■■■■■ 4.04
PHOX2A-203ENST00000546310 UGGT1Q9NYU2 1555 aa40.3■■■■■ 4.04
PHOX2A-203ENST00000546310 DEPDC5O75140 1603 aa40.28■■■■■ 4.04
PHOX2A-203ENST00000546310 CAMSAP2Q08AD1 1489 aa40.26■■■■■ 4.04
PHOX2A-203ENST00000546310 ALKQ9UM73 1620 aa40.26■■■■■ 4.04
PHOX2A-203ENST00000546310 RSPH4AQ5TD94 716 aa40.25■■■■■ 4.03
PHOX2A-203ENST00000546310 PHF23Q9BUL5 403 aaPredicted RBP40.24■■■■■ 4.03
PHOX2A-203ENST00000546310 IQGAP1P46940 1657 aa40.19■■■■■ 4.02
PHOX2A-203ENST00000546310 NCOA2Q15596 1464 aa40.19■■■■■ 4.02
PHOX2A-203ENST00000546310 ARHGEF5Q12774 1597 aa40.13■■■■■ 4.01
PHOX2A-203ENST00000546310 LRRC7Q96NW7 1537 aa40.11■■■■■ 4.01
PHOX2A-203ENST00000546310 TSPY4P0CV99 314 aa40.1■■■■■ 4.01
PHOX2A-203ENST00000546310 TSPY10P0CW01 314 aa40.1■■■■■ 4.01
PHOX2A-203ENST00000546310 STRCP1A6NGW2 1772 aa40.1■■■■■ 4.01
PHOX2A-203ENST00000546310 ABCC3O15438 1527 aa40.07■■■■■ 4.01
PHOX2A-203ENST00000546310 SYNMO15061 1565 aa40.07■■■■■ 4.01
PHOX2A-203ENST00000546310 RNF17Q9BXT8 1623 aaKnown RBP40.07■■■■■ 4.01
PHOX2A-203ENST00000546310 SENP3Q9H4L4 574 aaPredicted RBP40.07■■■■■ 4.01
PHOX2A-203ENST00000546310 ZC3H13Q5T200 1668 aaKnown RBP40.05■■■■■ 4
PHOX2A-203ENST00000546310 ERVK-7P63135 1459 aa40.02■■■■■ 4
PHOX2A-203ENST00000546310 MAST1Q9Y2H9 1570 aa39.95■■■■□ 3.99
PHOX2A-203ENST00000546310 EIF2AK4Q9P2K8 1649 aaKnown RBP39.94■■■■□ 3.98
PHOX2A-203ENST00000546310 UBR1Q8IWV7 1749 aa39.91■■■■□ 3.98
PHOX2A-203ENST00000546310 SCAF11Q99590 1463 aaKnown RBP39.91■■■■□ 3.98
PHOX2A-203ENST00000546310 MROH1Q8NDA8 1641 aa39.91■■■■□ 3.98
PHOX2A-203ENST00000546310 CEP152O94986 1710 aa39.85■■■■□ 3.97
PHOX2A-203ENST00000546310 ARHGAP23Q9P227 1491 aa39.82■■■■□ 3.97
PHOX2A-203ENST00000546310 LTKP29376 864 aa39.82■■■■□ 3.97
PHOX2A-203ENST00000546310 SLIT1O75093 1534 aa39.81■■■■□ 3.96
PHOX2A-203ENST00000546310 TXNDC2Q86VQ3 553 aa39.81■■■■□ 3.96
PHOX2A-203ENST00000546310 RGS17Q9UGC6 210 aaPredicted RBP39.81■■■■□ 3.96
PHOX2A-203ENST00000546310 CFAP65Q6ZU64 1925 aaKnown RBP39.79■■■■□ 3.96
PHOX2A-203ENST00000546310 LRRC9Q6ZRR7 1453 aa39.79■■■■□ 3.96
PHOX2A-203ENST00000546310 XIRP1Q702N8 1843 aaKnown RBP39.75■■■■□ 3.95
PHOX2A-203ENST00000546310 DUOX2Q9NRD8 1548 aa39.75■■■■□ 3.95
PHOX2A-203ENST00000546310 EID1Q9Y6B2 187 aa39.73■■■■□ 3.95
PHOX2A-203ENST00000546310 ARHGAP31Q2M1Z3 1444 aa39.72■■■■□ 3.95
PHOX2A-203ENST00000546310 FAM135BQ49AJ0 1406 aa39.68■■■■□ 3.94
PHOX2A-203ENST00000546310 PRDM15P57071 1507 aaPredicted RBP39.68■■■■□ 3.94
PHOX2A-203ENST00000546310 MYOM3Q5VTT5 1437 aa39.67■■■■□ 3.94
PHOX2A-203ENST00000546310 TMEM2Q9UHN6 1383 aa39.63■■■■□ 3.93
PHOX2A-203ENST00000546310 PIK3C2BO00750 1634 aa39.63■■■■□ 3.93
PHOX2A-203ENST00000546310 VPS8Q8N3P4 1428 aa39.63■■■■□ 3.93
PHOX2A-203ENST00000546310 KIF15Q9NS87 1388 aa39.62■■■■□ 3.93
PHOX2A-203ENST00000546310 ERBINQ96RT1 1412 aa39.6■■■■□ 3.93
PHOX2A-203ENST00000546310 TMEM94Q12767 1356 aa39.59■■■■□ 3.93
PHOX2A-203ENST00000546310 KANK4Q5T7N3 995 aaPredicted RBP39.59■■■■□ 3.93
PHOX2A-203ENST00000546310 STAG3Q9UJ98 1225 aa39.58■■■■□ 3.93
PHOX2A-203ENST00000546310 POTEAQ6S8J7 498 aa39.55■■■■□ 3.92
PHOX2A-203ENST00000546310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.55■■■■□ 3.92
PHOX2A-203ENST00000546310 KCNA6P17658 529 aa39.53■■■■□ 3.92
PHOX2A-203ENST00000546310 RRP7BPQ9NSQ0 103 aa39.53■■■■□ 3.92
PHOX2A-203ENST00000546310 MAP3K1Q13233 1512 aa39.53■■■■□ 3.92
PHOX2A-203ENST00000546310 EFCAB6Q5THR3 1501 aa39.53■■■■□ 3.92
PHOX2A-203ENST00000546310 KDM5AP29375 1690 aaKnown RBP39.51■■■■□ 3.91
PHOX2A-203ENST00000546310 ROBO1Q9Y6N7 1651 aa39.51■■■■□ 3.91
PHOX2A-203ENST00000546310 ABCC5O15440 1437 aa39.49■■■■□ 3.91
PHOX2A-203ENST00000546310 KANK1Q14678 1352 aa39.49■■■■□ 3.91
PHOX2A-203ENST00000546310 CROCC2H7BZ55 1655 aa39.49■■■■□ 3.91
PHOX2A-203ENST00000546310 PROSER2Q86WR7 435 aaPredicted RBP39.48■■■■□ 3.91
PHOX2A-203ENST00000546310 IDI1Q13907 227 aa39.46■■■■□ 3.91
PHOX2A-203ENST00000546310 SLC26A8Q96RN1 970 aa39.46■■■■□ 3.91
PHOX2A-203ENST00000546310 TET3O43151 1660 aa39.45■■■■□ 3.91
PHOX2A-203ENST00000546310 RBM33Q96EV2 1170 aaKnown RBP39.44■■■■□ 3.9
PHOX2A-203ENST00000546310 LMTK2Q8IWU2 1503 aa39.41■■■■□ 3.9
PHOX2A-203ENST00000546310 NKTRP30414 1462 aaKnown RBP39.4■■■■□ 3.9
PHOX2A-203ENST00000546310 NWD1Q149M9 1564 aa39.38■■■■□ 3.89
PHOX2A-203ENST00000546310 PTPN23Q9H3S7 1636 aa39.37■■■■□ 3.89
PHOX2A-203ENST00000546310 DAPK1P53355 1430 aa39.37■■■■□ 3.89
PHOX2A-203ENST00000546310 ADGRB3O60242 1522 aa39.35■■■■□ 3.89
PHOX2A-203ENST00000546310 MSH6P52701 1360 aa39.34■■■■□ 3.89
PHOX2A-203ENST00000546310 NOS1P29475 1434 aa39.32■■■■□ 3.89
PHOX2A-203ENST00000546310 BCANQ96GW7 911 aa39.29■■■■□ 3.88
PHOX2A-203ENST00000546310 SLAIN2Q9P270 581 aa39.28■■■■□ 3.88
PHOX2A-203ENST00000546310 ANKRD30AQ9BXX3 1397 aa39.28■■■■□ 3.88
PHOX2A-203ENST00000546310 PHLPP1O60346 1717 aa39.28■■■■□ 3.88
PHOX2A-203ENST00000546310 JCADQ9P266 1359 aa39.27■■■■□ 3.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms