RNA–Protein interactions for RNA: ENST00000546006.5

CCDC189-212, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-212ENST00000546006 KDM4FA0A1W2PPD8 638 aa27.72■■■□□ 2.03
CCDC189-212ENST00000546006 MROH1Q8NDA8 1641 aa27.71■■■□□ 2.03
CCDC189-212ENST00000546006 PCGF6Q9BYE7 350 aa27.71■■■□□ 2.03
CCDC189-212ENST00000546006 PRDM15P57071 1507 aaPredicted RBP27.69■■■□□ 2.02
CCDC189-212ENST00000546006 RAB3GAP2Q9H2M9 1393 aa27.69■■■□□ 2.02
CCDC189-212ENST00000546006 PPP6R1Q9UPN7 881 aa27.69■■■□□ 2.02
CCDC189-212ENST00000546006 UNC13BO14795 1591 aa27.68■■■□□ 2.02
CCDC189-212ENST00000546006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.67■■■□□ 2.02
CCDC189-212ENST00000546006 ADAMTSL3P82987 1691 aa27.66■■■□□ 2.02
CCDC189-212ENST00000546006 KANK1Q14678 1352 aa27.65■■■□□ 2.02
CCDC189-212ENST00000546006 FAM135AQ9P2D6 1515 aa27.64■■■□□ 2.02
CCDC189-212ENST00000546006 HRCP23327 699 aa27.63■■■□□ 2.01
CCDC189-212ENST00000546006 VWDEQ8N2E2 1590 aa27.63■■■□□ 2.01
CCDC189-212ENST00000546006 KDM5DQ9BY66 1539 aa27.62■■■□□ 2.01
CCDC189-212ENST00000546006 ACIN1Q9UKV3 1341 aaKnown RBP27.62■■■□□ 2.01
CCDC189-212ENST00000546006 WASHC2CQ9Y4E1 1318 aa27.62■■■□□ 2.01
CCDC189-212ENST00000546006 ESF1Q9H501 851 aaKnown RBP27.62■■■□□ 2.01
CCDC189-212ENST00000546006 NUP155O75694 1391 aa27.61■■■□□ 2.01
CCDC189-212ENST00000546006 MADDQ8WXG6 1647 aa27.61■■■□□ 2.01
CCDC189-212ENST00000546006 FER1L4A9Z1Z3 1794 aa27.6■■■□□ 2.01
CCDC189-212ENST00000546006 TRIM52Q96A61 297 aa27.6■■■□□ 2.01
CCDC189-212ENST00000546006 ABCC3O15438 1527 aa27.6■■■□□ 2.01
CCDC189-212ENST00000546006 CNTLNQ9NXG0 1405 aa27.6■■■□□ 2.01
CCDC189-212ENST00000546006 ZC3H13Q5T200 1668 aaKnown RBP27.58■■■□□ 2.01
CCDC189-212ENST00000546006 CLTCQ00610 1675 aaKnown RBP27.57■■■□□ 2
CCDC189-212ENST00000546006 LMTK2Q8IWU2 1503 aa27.57■■■□□ 2
CCDC189-212ENST00000546006 IQGAP3Q86VI3 1631 aa27.56■■■□□ 2
CCDC189-212ENST00000546006 AEBP2Q6ZN18 517 aaPredicted RBP27.56■■■□□ 2
CCDC189-212ENST00000546006 CEP152O94986 1710 aa27.55■■■□□ 2
CCDC189-212ENST00000546006 RIMS1Q86UR5 1692 aaKnown RBP27.53■■■□□ 2
CCDC189-212ENST00000546006 MROH2AA6NES4 1674 aa27.52■■■□□ 2
CCDC189-212ENST00000546006 ZMYM3Q14202 1370 aa27.51■■□□□ 1.99
CCDC189-212ENST00000546006 PZPP20742 1482 aa27.51■■□□□ 1.99
CCDC189-212ENST00000546006 CAMSAP1Q5T5Y3 1602 aa27.49■■□□□ 1.99
CCDC189-212ENST00000546006 TET3O43151 1660 aa27.49■■□□□ 1.99
CCDC189-212ENST00000546006 EFCAB6Q5THR3 1501 aa27.47■■□□□ 1.99
CCDC189-212ENST00000546006 SLC4A1APQ9BWU0 796 aaKnown RBP27.46■■□□□ 1.99
CCDC189-212ENST00000546006 PTPRMP28827 1452 aa27.46■■□□□ 1.99
CCDC189-212ENST00000546006 ARHGAP31Q2M1Z3 1444 aa27.46■■□□□ 1.99
CCDC189-212ENST00000546006 MPHOSPH9Q99550 1183 aa27.45■■□□□ 1.98
CCDC189-212ENST00000546006 NPATQ14207 1427 aa27.44■■□□□ 1.98
CCDC189-212ENST00000546006 C3P01024 1663 aa27.43■■□□□ 1.98
CCDC189-212ENST00000546006 CEBPAP49715 358 aaPredicted RBP27.42■■□□□ 1.98
CCDC189-212ENST00000546006 PKD2Q13563 968 aa27.4■■□□□ 1.98
CCDC189-212ENST00000546006 RPRD2Q5VT52 1461 aaKnown RBP27.4■■□□□ 1.98
CCDC189-212ENST00000546006 E9PCH4 1651 aa27.39■■□□□ 1.98
CCDC189-212ENST00000546006 PLPPR3Q6T4P5 718 aa27.39■■□□□ 1.98
CCDC189-212ENST00000546006 FBXO31Q5XUX0 539 aaPredicted RBP27.36■■□□□ 1.97
CCDC189-212ENST00000546006 ERVK-7P63135 1459 aa27.34■■□□□ 1.97
CCDC189-212ENST00000546006 SPATA31D1Q6ZQQ2 1576 aa27.32■■□□□ 1.96
CCDC189-212ENST00000546006 PREX1Q8TCU6 1659 aa27.32■■□□□ 1.96
CCDC189-212ENST00000546006 FOXD1Q16676 465 aa27.31■■□□□ 1.96
CCDC189-212ENST00000546006 NOS1P29475 1434 aa27.31■■□□□ 1.96
CCDC189-212ENST00000546006 CFAP65Q6ZU64 1925 aaKnown RBP27.31■■□□□ 1.96
CCDC189-212ENST00000546006 DHX57Q6P158 1386 aaKnown RBP27.29■■□□□ 1.96
CCDC189-212ENST00000546006 PTPRTO14522 1441 aa27.28■■□□□ 1.96
CCDC189-212ENST00000546006 TNRQ92752 1358 aa27.28■■□□□ 1.96
CCDC189-212ENST00000546006 SPHKAPQ2M3C7 1700 aa27.25■■□□□ 1.95
CCDC189-212ENST00000546006 SYNMO15061 1565 aa27.24■■□□□ 1.95
CCDC189-212ENST00000546006 PLA2R1Q13018 1463 aa27.24■■□□□ 1.95
CCDC189-212ENST00000546006 TRPM2O94759 1503 aa27.22■■□□□ 1.95
CCDC189-212ENST00000546006 SETD1BQ9UPS6 1966 aaKnown RBP27.21■■□□□ 1.95
CCDC189-212ENST00000546006 SLC52A1Q9NWF4 448 aa27.19■■□□□ 1.94
CCDC189-212ENST00000546006 ANKRD30BQ9BXX2 1392 aa27.19■■□□□ 1.94
CCDC189-212ENST00000546006 NLRP1Q9C000 1473 aa27.18■■□□□ 1.94
CCDC189-212ENST00000546006 MYO3AQ8NEV4 1616 aa27.17■■□□□ 1.94
CCDC189-212ENST00000546006 IDI1Q13907 227 aa27.16■■□□□ 1.94
CCDC189-212ENST00000546006 UGGT1Q9NYU2 1555 aa27.16■■□□□ 1.94
CCDC189-212ENST00000546006 PIK3C2BO00750 1634 aa27.16■■□□□ 1.94
CCDC189-212ENST00000546006 UHRF1BP1Q6BDS2 1440 aa27.15■■□□□ 1.94
CCDC189-212ENST00000546006 CCDC144AA2RUR9 1427 aa27.13■■□□□ 1.93
CCDC189-212ENST00000546006 CLTCL1P53675 1640 aa27.13■■□□□ 1.93
CCDC189-212ENST00000546006 A2ML1A8K2U0 1454 aa27.11■■□□□ 1.93
CCDC189-212ENST00000546006 CEP170BQ9Y4F5 1589 aaPredicted RBP27.1■■□□□ 1.93
CCDC189-212ENST00000546006 ZNF142P52746 1687 aaPredicted RBP27.09■■□□□ 1.93
CCDC189-212ENST00000546006 ADGRB3O60242 1522 aa27.05■■□□□ 1.92
CCDC189-212ENST00000546006 CCER1Q8TC90 406 aaPredicted RBP27.05■■□□□ 1.92
CCDC189-212ENST00000546006 STAG3Q9UJ98 1225 aa27.05■■□□□ 1.92
CCDC189-212ENST00000546006 LMTK3Q96Q04 1460 aa27.04■■□□□ 1.92
CCDC189-212ENST00000546006 CHGAP10645 457 aaKnown RBP27.03■■□□□ 1.92
CCDC189-212ENST00000546006 UBR1Q8IWV7 1749 aa27.03■■□□□ 1.92
CCDC189-212ENST00000546006 KDM5AP29375 1690 aaKnown RBP27.03■■□□□ 1.92
CCDC189-212ENST00000546006 TMEM131LA2VDJ0 1609 aa27.03■■□□□ 1.92
CCDC189-212ENST00000546006 KIF1BO60333 1816 aa27.01■■□□□ 1.92
CCDC189-212ENST00000546006 CLSPNQ9HAW4 1339 aa27.01■■□□□ 1.91
CCDC189-212ENST00000546006 THEMISQ8N1K5 641 aaPredicted RBP27■■□□□ 1.91
CCDC189-212ENST00000546006 SIN3AQ96ST3 1273 aa26.99■■□□□ 1.91
CCDC189-212ENST00000546006 SPATA31E1Q6ZUB1 1445 aa26.98■■□□□ 1.91
CCDC189-212ENST00000546006 NEURL4Q96JN8 1562 aa26.96■■□□□ 1.91
CCDC189-212ENST00000546006 MYO5BQ9ULV0 1848 aa26.95■■□□□ 1.9
CCDC189-212ENST00000546006 NEUROD1Q13562 356 aa26.94■■□□□ 1.9
CCDC189-212ENST00000546006 ZNF326Q5BKZ1 582 aaKnown RBP26.93■■□□□ 1.9
CCDC189-212ENST00000546006 TMEM2Q9UHN6 1383 aa26.92■■□□□ 1.9
CCDC189-212ENST00000546006 HSPA2P54652 639 aa26.92■■□□□ 1.9
CCDC189-212ENST00000546006 ARHGAP23Q9P227 1491 aa26.91■■□□□ 1.9
CCDC189-212ENST00000546006 RGL3Q3MIN7 710 aa26.91■■□□□ 1.9
CCDC189-212ENST00000546006 SLIT1O75093 1534 aa26.91■■□□□ 1.9
CCDC189-212ENST00000546006 RIMS2Q9UQ26 1411 aa26.89■■□□□ 1.89
CCDC189-212ENST00000546006 RPGRIP1LQ68CZ1 1315 aa26.88■■□□□ 1.89
CCDC189-212ENST00000546006 ZFYVE9O95405 1425 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms