RNA–Protein interactions for RNA: ENST00000545436.5

LMO3-232, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-232ENST00000545436 DEPDC5O75140 1603 aa18.44■□□□□ 0.54
LMO3-232ENST00000545436 KDM5DQ9BY66 1539 aa18.44■□□□□ 0.54
LMO3-232ENST00000545436 FAM135AQ9P2D6 1515 aa18.44■□□□□ 0.54
LMO3-232ENST00000545436 MYT1LQ9UL68 1186 aa18.43■□□□□ 0.54
LMO3-232ENST00000545436 RNF17Q9BXT8 1623 aaKnown RBP18.42■□□□□ 0.54
LMO3-232ENST00000545436 YEATS2Q9ULM3 1422 aa18.4■□□□□ 0.54
LMO3-232ENST00000545436 CLSPNQ9HAW4 1339 aa18.39■□□□□ 0.53
LMO3-232ENST00000545436 PRDM15P57071 1507 aaPredicted RBP18.39■□□□□ 0.53
LMO3-232ENST00000545436 PPP6R1Q9UPN7 881 aa18.37■□□□□ 0.53
LMO3-232ENST00000545436 IQGAP3Q86VI3 1631 aa18.37■□□□□ 0.53
LMO3-232ENST00000545436 KANK1Q14678 1352 aa18.35■□□□□ 0.53
LMO3-232ENST00000545436 VWDEQ8N2E2 1590 aa18.34■□□□□ 0.53
LMO3-232ENST00000545436 PLPPR3Q6T4P5 718 aa18.34■□□□□ 0.53
LMO3-232ENST00000545436 ZC3H13Q5T200 1668 aaKnown RBP18.34■□□□□ 0.53
LMO3-232ENST00000545436 LMTK2Q8IWU2 1503 aa18.32■□□□□ 0.52
LMO3-232ENST00000545436 MROH1Q8NDA8 1641 aa18.31■□□□□ 0.52
LMO3-232ENST00000545436 NUP155O75694 1391 aa18.3■□□□□ 0.52
LMO3-232ENST00000545436 DHX57Q6P158 1386 aaKnown RBP18.3■□□□□ 0.52
LMO3-232ENST00000545436 KIF3BO15066 747 aa18.29■□□□□ 0.52
LMO3-232ENST00000545436 TET3O43151 1660 aa18.28■□□□□ 0.52
LMO3-232ENST00000545436 PZPP20742 1482 aa18.28■□□□□ 0.52
LMO3-232ENST00000545436 TRIM52Q96A61 297 aa18.28■□□□□ 0.52
LMO3-232ENST00000545436 RPRD2Q5VT52 1461 aaKnown RBP18.26■□□□□ 0.51
LMO3-232ENST00000545436 MPHOSPH9Q99550 1183 aa18.24■□□□□ 0.51
LMO3-232ENST00000545436 SLC4A1APQ9BWU0 796 aaKnown RBP18.24■□□□□ 0.51
LMO3-232ENST00000545436 MSH5O43196 834 aa18.23■□□□□ 0.51
LMO3-232ENST00000545436 EFCAB6Q5THR3 1501 aa18.23■□□□□ 0.51
LMO3-232ENST00000545436 CNTLNQ9NXG0 1405 aa18.23■□□□□ 0.51
LMO3-232ENST00000545436 CCER1Q8TC90 406 aaPredicted RBP18.22■□□□□ 0.51
LMO3-232ENST00000545436 ABCC3O15438 1527 aa18.22■□□□□ 0.51
LMO3-232ENST00000545436 ARHGAP31Q2M1Z3 1444 aa18.22■□□□□ 0.51
LMO3-232ENST00000545436 SIGLEC1Q9BZZ2 1709 aa18.2■□□□□ 0.5
LMO3-232ENST00000545436 MROH2AA6NES4 1674 aa18.19■□□□□ 0.5
LMO3-232ENST00000545436 CAMSAP1Q5T5Y3 1602 aa18.18■□□□□ 0.5
LMO3-232ENST00000545436 WASHC2CQ9Y4E1 1318 aa18.18■□□□□ 0.5
LMO3-232ENST00000545436 CEP152O94986 1710 aa18.18■□□□□ 0.5
LMO3-232ENST00000545436 GGT6Q6P531 493 aa18.17■□□□□ 0.5
LMO3-232ENST00000545436 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.17■□□□□ 0.5
LMO3-232ENST00000545436 E9PCH4 1651 aa18.15■□□□□ 0.5
LMO3-232ENST00000545436 ZEB1P37275 1124 aaPredicted RBP18.15■□□□□ 0.5
LMO3-232ENST00000545436 PKD2Q13563 968 aa18.15■□□□□ 0.5
LMO3-232ENST00000545436 ARID4BQ4LE39 1312 aaPredicted RBP18.14■□□□□ 0.49
LMO3-232ENST00000545436 ANKRD30BQ9BXX2 1392 aa18.14■□□□□ 0.49
LMO3-232ENST00000545436 SPHKAPQ2M3C7 1700 aa18.13■□□□□ 0.49
LMO3-232ENST00000545436 PIAS4Q8N2W9 510 aaPredicted RBP18.13■□□□□ 0.49
LMO3-232ENST00000545436 ESF1Q9H501 851 aaKnown RBP18.13■□□□□ 0.49
LMO3-232ENST00000545436 TIMELESSQ9UNS1 1208 aa18.13■□□□□ 0.49
LMO3-232ENST00000545436 PTPRTO14522 1441 aa18.13■□□□□ 0.49
LMO3-232ENST00000545436 TRPM2O94759 1503 aa18.12■□□□□ 0.49
LMO3-232ENST00000545436 CLTCQ00610 1675 aaKnown RBP18.11■□□□□ 0.49
LMO3-232ENST00000545436 FER1L4A9Z1Z3 1794 aa18.11■□□□□ 0.49
LMO3-232ENST00000545436 NEURL4Q96JN8 1562 aa18.1■□□□□ 0.49
LMO3-232ENST00000545436 NPATQ14207 1427 aa18.1■□□□□ 0.49
LMO3-232ENST00000545436 POTEDQ86YR6 584 aa18.09■□□□□ 0.49
LMO3-232ENST00000545436 ADAMTSL3P82987 1691 aa18.09■□□□□ 0.49
LMO3-232ENST00000545436 CCDC144AA2RUR9 1427 aa18.06■□□□□ 0.48
LMO3-232ENST00000545436 NOS1P29475 1434 aa18.06■□□□□ 0.48
LMO3-232ENST00000545436 PREX1Q8TCU6 1659 aa18.06■□□□□ 0.48
LMO3-232ENST00000545436 SPATA31D1Q6ZQQ2 1576 aa18.05■□□□□ 0.48
LMO3-232ENST00000545436 ZMYM3Q14202 1370 aa18.04■□□□□ 0.48
LMO3-232ENST00000545436 PLA2R1Q13018 1463 aa18.03■□□□□ 0.48
LMO3-232ENST00000545436 ERVK-7P63135 1459 aa18.02■□□□□ 0.48
LMO3-232ENST00000545436 ADRA2BP18089 450 aa18.02■□□□□ 0.48
LMO3-232ENST00000545436 SLC52A1Q9NWF4 448 aa18.02■□□□□ 0.48
LMO3-232ENST00000545436 PIK3C2BO00750 1634 aa18.01■□□□□ 0.47
LMO3-232ENST00000545436 MLECQ14165 292 aa18.01■□□□□ 0.47
LMO3-232ENST00000545436 MADDQ8WXG6 1647 aa18.01■□□□□ 0.47
LMO3-232ENST00000545436 KDM5AP29375 1690 aaKnown RBP18■□□□□ 0.47
LMO3-232ENST00000545436 C3P01024 1663 aa17.99■□□□□ 0.47
LMO3-232ENST00000545436 STAC3Q96MF2 364 aa17.99■□□□□ 0.47
LMO3-232ENST00000545436 KIF1BO60333 1816 aa17.99■□□□□ 0.47
LMO3-232ENST00000545436 SYNMO15061 1565 aa17.97■□□□□ 0.47
LMO3-232ENST00000545436 CLTCL1P53675 1640 aa17.97■□□□□ 0.47
LMO3-232ENST00000545436 TONSLQ96HA7 1378 aa17.96■□□□□ 0.47
LMO3-232ENST00000545436 RIMS1Q86UR5 1692 aaKnown RBP17.96■□□□□ 0.47
LMO3-232ENST00000545436 NLRP1Q9C000 1473 aa17.95■□□□□ 0.46
LMO3-232ENST00000545436 SETD1BQ9UPS6 1966 aaKnown RBP17.95■□□□□ 0.46
LMO3-232ENST00000545436 CFAP65Q6ZU64 1925 aaKnown RBP17.94■□□□□ 0.46
LMO3-232ENST00000545436 SPATA31E1Q6ZUB1 1445 aa17.93■□□□□ 0.46
LMO3-232ENST00000545436 ADGRB3O60242 1522 aa17.93■□□□□ 0.46
LMO3-232ENST00000545436 TNRQ92752 1358 aa17.92■□□□□ 0.46
LMO3-232ENST00000545436 SIN3AQ96ST3 1273 aa17.91■□□□□ 0.46
LMO3-232ENST00000545436 RPGRIP1LQ68CZ1 1315 aa17.89■□□□□ 0.45
LMO3-232ENST00000545436 PTPRMP28827 1452 aa17.88■□□□□ 0.45
LMO3-232ENST00000545436 NEUROD1Q13562 356 aa17.88■□□□□ 0.45
LMO3-232ENST00000545436 TMEM131LA2VDJ0 1609 aa17.87■□□□□ 0.45
LMO3-232ENST00000545436 UGGT1Q9NYU2 1555 aa17.86■□□□□ 0.45
LMO3-232ENST00000545436 ZNF142P52746 1687 aaPredicted RBP17.85■□□□□ 0.45
LMO3-232ENST00000545436 FBXO31Q5XUX0 539 aaPredicted RBP17.85■□□□□ 0.45
LMO3-232ENST00000545436 IFT172Q9UG01 1749 aa17.84■□□□□ 0.45
LMO3-232ENST00000545436 MYO3AQ8NEV4 1616 aa17.84■□□□□ 0.45
LMO3-232ENST00000545436 MYOM2P54296 1465 aa17.84■□□□□ 0.45
LMO3-232ENST00000545436 UHRF1BP1Q6BDS2 1440 aa17.84■□□□□ 0.45
LMO3-232ENST00000545436 IDI1Q13907 227 aa17.84■□□□□ 0.45
LMO3-232ENST00000545436 ZFYVE9O95405 1425 aa17.83■□□□□ 0.45
LMO3-232ENST00000545436 A2ML1A8K2U0 1454 aa17.82■□□□□ 0.44
LMO3-232ENST00000545436 L3MBTL2Q969R5 705 aa17.82■□□□□ 0.44
LMO3-232ENST00000545436 UBR1Q8IWV7 1749 aa17.81■□□□□ 0.44
LMO3-232ENST00000545436 PPP1R15AO75807 674 aaPredicted RBP17.81■□□□□ 0.44
LMO3-232ENST00000545436 PPLO60437 1756 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms