RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 ZNF644Q9H582 1327 aaPredicted RBP23.66■■□□□ 1.38
COPS7A-220ENST00000544725 MBD5Q9P267 1494 aa23.65■■□□□ 1.38
COPS7A-220ENST00000544725 SHANK2Q9UPX8 1470 aa23.63■■□□□ 1.37
COPS7A-220ENST00000544725 FBXO31Q5XUX0 539 aaPredicted RBP23.62■■□□□ 1.37
COPS7A-220ENST00000544725 TIAM1Q13009 1591 aa23.61■■□□□ 1.37
COPS7A-220ENST00000544725 MED1Q15648 1581 aaPredicted RBP23.61■■□□□ 1.37
COPS7A-220ENST00000544725 KIF3BO15066 747 aa23.61■■□□□ 1.37
COPS7A-220ENST00000544725 ANKLE2Q86XL3 938 aa23.61■■□□□ 1.37
COPS7A-220ENST00000544725 NEURL4Q96JN8 1562 aa23.61■■□□□ 1.37
COPS7A-220ENST00000544725 POLR1AO95602 1720 aaPredicted RBP23.6■■□□□ 1.37
COPS7A-220ENST00000544725 PZPP20742 1482 aa23.6■■□□□ 1.37
COPS7A-220ENST00000544725 FAM135AQ9P2D6 1515 aa23.59■■□□□ 1.37
COPS7A-220ENST00000544725 KDM5DQ9BY66 1539 aa23.59■■□□□ 1.37
COPS7A-220ENST00000544725 THEMISQ8N1K5 641 aaPredicted RBP23.58■■□□□ 1.37
COPS7A-220ENST00000544725 EHBP1L1Q8N3D4 1523 aa23.58■■□□□ 1.36
COPS7A-220ENST00000544725 WASHC2CQ9Y4E1 1318 aa23.58■■□□□ 1.36
COPS7A-220ENST00000544725 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.56■■□□□ 1.36
COPS7A-220ENST00000544725 CEP162Q5TB80 1403 aa23.56■■□□□ 1.36
COPS7A-220ENST00000544725 CCDC141Q6ZP82 1450 aa23.55■■□□□ 1.36
COPS7A-220ENST00000544725 MIA2Q96PC5 1412 aa23.54■■□□□ 1.36
COPS7A-220ENST00000544725 RSPH4AQ5TD94 716 aa23.54■■□□□ 1.36
COPS7A-220ENST00000544725 NLRP1Q9C000 1473 aa23.54■■□□□ 1.36
COPS7A-220ENST00000544725 VWDEQ8N2E2 1590 aa23.52■■□□□ 1.36
COPS7A-220ENST00000544725 NPHP4O75161 1426 aaPredicted RBP23.52■■□□□ 1.36
COPS7A-220ENST00000544725 PHF23Q9BUL5 403 aaPredicted RBP23.52■■□□□ 1.36
COPS7A-220ENST00000544725 MED14O60244 1454 aa23.51■■□□□ 1.35
COPS7A-220ENST00000544725 UGGT1Q9NYU2 1555 aa23.51■■□□□ 1.35
COPS7A-220ENST00000544725 DEPDC5O75140 1603 aa23.48■■□□□ 1.35
COPS7A-220ENST00000544725 CAMSAP2Q08AD1 1489 aa23.47■■□□□ 1.35
COPS7A-220ENST00000544725 TSPY4P0CV99 314 aa23.45■■□□□ 1.34
COPS7A-220ENST00000544725 TSPY10P0CW01 314 aa23.45■■□□□ 1.34
COPS7A-220ENST00000544725 NCOA2Q15596 1464 aa23.43■■□□□ 1.34
COPS7A-220ENST00000544725 ALKQ9UM73 1620 aa23.43■■□□□ 1.34
COPS7A-220ENST00000544725 IQGAP1P46940 1657 aa23.41■■□□□ 1.34
COPS7A-220ENST00000544725 LRRC7Q96NW7 1537 aa23.39■■□□□ 1.34
COPS7A-220ENST00000544725 ARHGEF5Q12774 1597 aa23.39■■□□□ 1.33
COPS7A-220ENST00000544725 SENP3Q9H4L4 574 aaPredicted RBP23.37■■□□□ 1.33
COPS7A-220ENST00000544725 SYNMO15061 1565 aa23.36■■□□□ 1.33
COPS7A-220ENST00000544725 ABCC3O15438 1527 aa23.36■■□□□ 1.33
COPS7A-220ENST00000544725 RNF17Q9BXT8 1623 aaKnown RBP23.36■■□□□ 1.33
COPS7A-220ENST00000544725 ERVK-7P63135 1459 aa23.34■■□□□ 1.33
COPS7A-220ENST00000544725 ZC3H13Q5T200 1668 aaKnown RBP23.34■■□□□ 1.33
COPS7A-220ENST00000544725 STRCP1A6NGW2 1772 aa23.32■■□□□ 1.32
COPS7A-220ENST00000544725 MAST1Q9Y2H9 1570 aa23.29■■□□□ 1.32
COPS7A-220ENST00000544725 SCAF11Q99590 1463 aaKnown RBP23.29■■□□□ 1.32
COPS7A-220ENST00000544725 EIF2AK4Q9P2K8 1649 aaKnown RBP23.28■■□□□ 1.32
COPS7A-220ENST00000544725 TXNDC2Q86VQ3 553 aa23.25■■□□□ 1.31
COPS7A-220ENST00000544725 UBR1Q8IWV7 1749 aa23.25■■□□□ 1.31
COPS7A-220ENST00000544725 LTKP29376 864 aa23.23■■□□□ 1.31
COPS7A-220ENST00000544725 EID1Q9Y6B2 187 aa23.23■■□□□ 1.31
COPS7A-220ENST00000544725 ARHGAP23Q9P227 1491 aa23.23■■□□□ 1.31
COPS7A-220ENST00000544725 MROH1Q8NDA8 1641 aa23.22■■□□□ 1.31
COPS7A-220ENST00000544725 RGS17Q9UGC6 210 aaPredicted RBP23.22■■□□□ 1.31
COPS7A-220ENST00000544725 SLIT1O75093 1534 aa23.22■■□□□ 1.31
COPS7A-220ENST00000544725 LRRC9Q6ZRR7 1453 aa23.2■■□□□ 1.3
COPS7A-220ENST00000544725 DUOX2Q9NRD8 1548 aa23.19■■□□□ 1.3
COPS7A-220ENST00000544725 ARHGAP31Q2M1Z3 1444 aa23.19■■□□□ 1.3
COPS7A-220ENST00000544725 CEP152O94986 1710 aa23.19■■□□□ 1.3
COPS7A-220ENST00000544725 FAM135BQ49AJ0 1406 aa23.17■■□□□ 1.3
COPS7A-220ENST00000544725 MYOM3Q5VTT5 1437 aa23.16■■□□□ 1.3
COPS7A-220ENST00000544725 CFAP65Q6ZU64 1925 aaKnown RBP23.16■■□□□ 1.3
COPS7A-220ENST00000544725 STAG3Q9UJ98 1225 aa23.14■■□□□ 1.29
COPS7A-220ENST00000544725 TMEM2Q9UHN6 1383 aa23.14■■□□□ 1.29
COPS7A-220ENST00000544725 KIF15Q9NS87 1388 aa23.13■■□□□ 1.29
COPS7A-220ENST00000544725 PRDM15P57071 1507 aaPredicted RBP23.13■■□□□ 1.29
COPS7A-220ENST00000544725 VPS8Q8N3P4 1428 aa23.12■■□□□ 1.29
COPS7A-220ENST00000544725 XIRP1Q702N8 1843 aaKnown RBP23.12■■□□□ 1.29
COPS7A-220ENST00000544725 ERBINQ96RT1 1412 aa23.11■■□□□ 1.29
COPS7A-220ENST00000544725 TMEM94Q12767 1356 aa23.11■■□□□ 1.29
COPS7A-220ENST00000544725 KCNA6P17658 529 aa23.09■■□□□ 1.29
COPS7A-220ENST00000544725 KANK4Q5T7N3 995 aaPredicted RBP23.09■■□□□ 1.29
COPS7A-220ENST00000544725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.09■■□□□ 1.29
COPS7A-220ENST00000544725 PIK3C2BO00750 1634 aa23.08■■□□□ 1.29
COPS7A-220ENST00000544725 POTEAQ6S8J7 498 aa23.08■■□□□ 1.29
COPS7A-220ENST00000544725 KANK1Q14678 1352 aa23.08■■□□□ 1.29
COPS7A-220ENST00000544725 RRP7BPQ9NSQ0 103 aa23.07■■□□□ 1.28
COPS7A-220ENST00000544725 PROSER2Q86WR7 435 aaPredicted RBP23.06■■□□□ 1.28
COPS7A-220ENST00000544725 MAP3K1Q13233 1512 aa23.06■■□□□ 1.28
COPS7A-220ENST00000544725 EFCAB6Q5THR3 1501 aa23.05■■□□□ 1.28
COPS7A-220ENST00000544725 IDI1Q13907 227 aa23.03■■□□□ 1.28
COPS7A-220ENST00000544725 SLC26A8Q96RN1 970 aa23.03■■□□□ 1.28
COPS7A-220ENST00000544725 KDM5AP29375 1690 aaKnown RBP23.03■■□□□ 1.28
COPS7A-220ENST00000544725 ABCC5O15440 1437 aa23.02■■□□□ 1.28
COPS7A-220ENST00000544725 ROBO1Q9Y6N7 1651 aa23.02■■□□□ 1.28
COPS7A-220ENST00000544725 TET3O43151 1660 aa23■■□□□ 1.27
COPS7A-220ENST00000544725 NKTRP30414 1462 aaKnown RBP22.99■■□□□ 1.27
COPS7A-220ENST00000544725 LMTK2Q8IWU2 1503 aa22.99■■□□□ 1.27
COPS7A-220ENST00000544725 RBM33Q96EV2 1170 aaKnown RBP22.99■■□□□ 1.27
COPS7A-220ENST00000544725 MSH6P52701 1360 aa22.98■■□□□ 1.27
COPS7A-220ENST00000544725 CROCC2H7BZ55 1655 aa22.97■■□□□ 1.27
COPS7A-220ENST00000544725 BCANQ96GW7 911 aa22.96■■□□□ 1.27
COPS7A-220ENST00000544725 DAPK1P53355 1430 aa22.96■■□□□ 1.27
COPS7A-220ENST00000544725 SLC52A1Q9NWF4 448 aa22.95■■□□□ 1.26
COPS7A-220ENST00000544725 NWD1Q149M9 1564 aa22.94■■□□□ 1.26
COPS7A-220ENST00000544725 NOS1P29475 1434 aa22.94■■□□□ 1.26
COPS7A-220ENST00000544725 ANKRD30AQ9BXX3 1397 aa22.94■■□□□ 1.26
COPS7A-220ENST00000544725 JCADQ9P266 1359 aa22.94■■□□□ 1.26
COPS7A-220ENST00000544725 SLAIN2Q9P270 581 aa22.94■■□□□ 1.26
COPS7A-220ENST00000544725 PTPN23Q9H3S7 1636 aa22.93■■□□□ 1.26
COPS7A-220ENST00000544725 ADGRB3O60242 1522 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms