RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 HSPA2P54652 639 aa17.65■□□□□ 0.42
YBX3-216ENST00000544622 RRP7BPQ9NSQ0 103 aa17.65■□□□□ 0.42
YBX3-216ENST00000544622 EIF2AK4Q9P2K8 1649 aaKnown RBP17.65■□□□□ 0.42
YBX3-216ENST00000544622 PTPRKQ15262 1439 aa17.64■□□□□ 0.42
YBX3-216ENST00000544622 FAM50AQ14320 339 aaKnown RBP17.64■□□□□ 0.41
YBX3-216ENST00000544622 PPARGC1BQ86YN6 1023 aaKnown RBP17.64■□□□□ 0.41
YBX3-216ENST00000544622 RNF17Q9BXT8 1623 aaKnown RBP17.64■□□□□ 0.41
YBX3-216ENST00000544622 UHRF1BP1Q6BDS2 1440 aa17.64■□□□□ 0.41
YBX3-216ENST00000544622 ADGRL2O95490 1459 aa17.63■□□□□ 0.41
YBX3-216ENST00000544622 CHIC2Q9UKJ5 165 aa17.63■□□□□ 0.41
YBX3-216ENST00000544622 WASHC2CQ9Y4E1 1318 aa17.63■□□□□ 0.41
YBX3-216ENST00000544622 ANKRD30AQ9BXX3 1397 aa17.63■□□□□ 0.41
YBX3-216ENST00000544622 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.63■□□□□ 0.41
YBX3-216ENST00000544622 ERBINQ96RT1 1412 aa17.63■□□□□ 0.41
YBX3-216ENST00000544622 KDM5DQ9BY66 1539 aa17.62■□□□□ 0.41
YBX3-216ENST00000544622 MROH1Q8NDA8 1641 aa17.61■□□□□ 0.41
YBX3-216ENST00000544622 PZPP20742 1482 aa17.58■□□□□ 0.41
YBX3-216ENST00000544622 ABCC3O15438 1527 aa17.57■□□□□ 0.4
YBX3-216ENST00000544622 FBXO31Q5XUX0 539 aaPredicted RBP17.57■□□□□ 0.4
YBX3-216ENST00000544622 PRDM15P57071 1507 aaPredicted RBP17.56■□□□□ 0.4
YBX3-216ENST00000544622 RRBP1Q9P2E9 1410 aaKnown RBP17.55■□□□□ 0.4
YBX3-216ENST00000544622 DEPDC5O75140 1603 aa17.54■□□□□ 0.4
YBX3-216ENST00000544622 ROCK1Q13464 1354 aa17.54■□□□□ 0.4
YBX3-216ENST00000544622 ZC3H13Q5T200 1668 aaKnown RBP17.54■□□□□ 0.4
YBX3-216ENST00000544622 STRCQ7RTU9 1775 aa17.52■□□□□ 0.4
YBX3-216ENST00000544622 ARHGAP31Q2M1Z3 1444 aa17.52■□□□□ 0.4
YBX3-216ENST00000544622 ANKRD50Q9ULJ7 1429 aa17.52■□□□□ 0.4
YBX3-216ENST00000544622 VWDEQ8N2E2 1590 aa17.52■□□□□ 0.39
YBX3-216ENST00000544622 MYO3AQ8NEV4 1616 aa17.51■□□□□ 0.39
YBX3-216ENST00000544622 ZNF142P52746 1687 aaPredicted RBP17.5■□□□□ 0.39
YBX3-216ENST00000544622 TNRQ92752 1358 aa17.5■□□□□ 0.39
YBX3-216ENST00000544622 CEP170BQ9Y4F5 1589 aaPredicted RBP17.49■□□□□ 0.39
YBX3-216ENST00000544622 LMTK2Q8IWU2 1503 aa17.49■□□□□ 0.39
YBX3-216ENST00000544622 A2ML1A8K2U0 1454 aa17.49■□□□□ 0.39
YBX3-216ENST00000544622 SPATA31D1Q6ZQQ2 1576 aa17.49■□□□□ 0.39
YBX3-216ENST00000544622 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.47■□□□□ 0.393e-10■■■□□ 16.3
YBX3-216ENST00000544622 DMRT2Q9Y5R5 561 aa17.47■□□□□ 0.39
YBX3-216ENST00000544622 CEP152O94986 1710 aa17.47■□□□□ 0.39
YBX3-216ENST00000544622 CAMSAP1Q5T5Y3 1602 aa17.47■□□□□ 0.39
YBX3-216ENST00000544622 ERVK-7P63135 1459 aa17.46■□□□□ 0.39
YBX3-216ENST00000544622 PLA2R1Q13018 1463 aa17.46■□□□□ 0.39
YBX3-216ENST00000544622 NLRP1Q9C000 1473 aa17.45■□□□□ 0.38
YBX3-216ENST00000544622 KANK1Q14678 1352 aa17.45■□□□□ 0.38
YBX3-216ENST00000544622 PTPRTO14522 1441 aa17.45■□□□□ 0.38
YBX3-216ENST00000544622 ITGAEP38570 1179 aa17.44■□□□□ 0.38
YBX3-216ENST00000544622 PKD2Q13563 968 aa17.42■□□□□ 0.38
YBX3-216ENST00000544622 NCKAP5LQ9HCH0 1330 aa17.41■□□□□ 0.38
YBX3-216ENST00000544622 EFCAB6Q5THR3 1501 aa17.39■□□□□ 0.37
YBX3-216ENST00000544622 THEMISQ8N1K5 641 aaPredicted RBP17.39■□□□□ 0.37
YBX3-216ENST00000544622 UNC13BO14795 1591 aa17.39■□□□□ 0.37
YBX3-216ENST00000544622 UGGT1Q9NYU2 1555 aa17.39■□□□□ 0.37
YBX3-216ENST00000544622 NOS1P29475 1434 aa17.38■□□□□ 0.37
YBX3-216ENST00000544622 NAIPQ13075 1403 aa17.37■□□□□ 0.37
YBX3-216ENST00000544622 RPRD2Q5VT52 1461 aaKnown RBP17.37■□□□□ 0.37
YBX3-216ENST00000544622 CFAP65Q6ZU64 1925 aaKnown RBP17.35■□□□□ 0.37
YBX3-216ENST00000544622 IDI1Q13907 227 aa17.34■□□□□ 0.37
YBX3-216ENST00000544622 TET3O43151 1660 aa17.33■□□□□ 0.37
YBX3-216ENST00000544622 NUP155O75694 1391 aa17.33■□□□□ 0.36
YBX3-216ENST00000544622 ANKLE2Q86XL3 938 aa17.33■□□□□ 0.36
YBX3-216ENST00000544622 IQGAP3Q86VI3 1631 aa17.32■□□□□ 0.36
YBX3-216ENST00000544622 SYNMO15061 1565 aa17.32■□□□□ 0.36
YBX3-216ENST00000544622 MED14O60244 1454 aa17.32■□□□□ 0.36
YBX3-216ENST00000544622 HFM1A2PYH4 1435 aa17.32■□□□□ 0.36
YBX3-216ENST00000544622 ILDR1Q86SU0 546 aaPredicted RBP17.32■□□□□ 0.36
YBX3-216ENST00000544622 NEURL4Q96JN8 1562 aa17.32■□□□□ 0.36
YBX3-216ENST00000544622 UBR1Q8IWV7 1749 aa17.31■□□□□ 0.36
YBX3-216ENST00000544622 CERKQ8TCT0 537 aa17.31■□□□□ 0.36
YBX3-216ENST00000544622 SLC52A1Q9NWF4 448 aa17.31■□□□□ 0.36
YBX3-216ENST00000544622 ARHGAP23Q9P227 1491 aa17.31■□□□□ 0.36
YBX3-216ENST00000544622 LTBP4Q8N2S1 1624 aa17.3■□□□□ 0.36
YBX3-216ENST00000544622 SLIT1O75093 1534 aa17.29■□□□□ 0.36
YBX3-216ENST00000544622 GCC2Q8IWJ2 1684 aa17.29■□□□□ 0.36
YBX3-216ENST00000544622 KDM5AP29375 1690 aaKnown RBP17.28■□□□□ 0.36
YBX3-216ENST00000544622 PIK3C2BO00750 1634 aa17.28■□□□□ 0.36
YBX3-216ENST00000544622 POLR1AO95602 1720 aaPredicted RBP17.27■□□□□ 0.36
YBX3-216ENST00000544622 E9PCH4 1651 aa17.27■□□□□ 0.36
YBX3-216ENST00000544622 LTKP29376 864 aa17.27■□□□□ 0.36
YBX3-216ENST00000544622 FBXO41Q8TF61 875 aa17.27■□□□□ 0.36
YBX3-216ENST00000544622 TMEM2Q9UHN6 1383 aa17.26■□□□□ 0.35
YBX3-216ENST00000544622 ZNF335Q9H4Z2 1342 aaPredicted RBP17.25■□□□□ 0.35
YBX3-216ENST00000544622 NPHP4O75161 1426 aaPredicted RBP17.25■□□□□ 0.35
YBX3-216ENST00000544622 TXNDC2Q86VQ3 553 aa17.23■□□□□ 0.35
YBX3-216ENST00000544622 SCAF11Q99590 1463 aaKnown RBP17.22■□□□□ 0.35
YBX3-216ENST00000544622 ADGRB3O60242 1522 aa17.21■□□□□ 0.35
YBX3-216ENST00000544622 STAG3Q9UJ98 1225 aa17.21■□□□□ 0.35
YBX3-216ENST00000544622 IQSEC2Q5JU85 1478 aa17.19■□□□□ 0.34
YBX3-216ENST00000544622 EID1Q9Y6B2 187 aa17.19■□□□□ 0.34
YBX3-216ENST00000544622 IQGAP1P46940 1657 aa17.19■□□□□ 0.34
YBX3-216ENST00000544622 TMEM131LA2VDJ0 1609 aa17.18■□□□□ 0.34
YBX3-216ENST00000544622 ZFYVE9O95405 1425 aa17.17■□□□□ 0.34
YBX3-216ENST00000544622 TRIM52Q96A61 297 aa17.14■□□□□ 0.33
YBX3-216ENST00000544622 CPS1P31327 1500 aa17.13■□□□□ 0.33
YBX3-216ENST00000544622 SPHKAPQ2M3C7 1700 aa17.13■□□□□ 0.33
YBX3-216ENST00000544622 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
YBX3-216ENST00000544622 SETD5Q9C0A6 1442 aa17.12■□□□□ 0.33
YBX3-216ENST00000544622 RIMS2Q9UQ26 1411 aa17.12■□□□□ 0.33
YBX3-216ENST00000544622 TRPM2O94759 1503 aa17.11■□□□□ 0.33
YBX3-216ENST00000544622 HDGFP51858 240 aaKnown RBP17.11■□□□□ 0.33
YBX3-216ENST00000544622 MYO5BQ9ULV0 1848 aa17.11■□□□□ 0.33
YBX3-216ENST00000544622 ACIN1Q9UKV3 1341 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms