RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 ZNF142P52746 1687 aaPredicted RBP15.45■□□□□ 0.06
C2CD3-220ENST00000544293 TOM1O60784 492 aa15.45■□□□□ 0.06
C2CD3-220ENST00000544293 DNMT1P26358 1616 aaKnown RBP15.45■□□□□ 0.06
C2CD3-220ENST00000544293 TNRQ92752 1358 aa15.45■□□□□ 0.06
C2CD3-220ENST00000544293 SHANK2Q9UPX8 1470 aa15.45■□□□□ 0.06
C2CD3-220ENST00000544293 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.44■□□□□ 0.06
C2CD3-220ENST00000544293 ANKLE2Q86XL3 938 aa15.43■□□□□ 0.06
C2CD3-220ENST00000544293 MTUS2Q5JR59 1369 aa15.43■□□□□ 0.06
C2CD3-220ENST00000544293 NEURL4Q96JN8 1562 aa15.43■□□□□ 0.06
C2CD3-220ENST00000544293 ALKQ9UM73 1620 aa15.43■□□□□ 0.06
C2CD3-220ENST00000544293 MIA2Q96PC5 1412 aa15.43■□□□□ 0.06
C2CD3-220ENST00000544293 SCAF1Q9H7N4 1312 aaKnown RBP15.42■□□□□ 0.06
C2CD3-220ENST00000544293 THEMISQ8N1K5 641 aaPredicted RBP15.41■□□□□ 0.06
C2CD3-220ENST00000544293 PZPP20742 1482 aa15.4■□□□□ 0.06
C2CD3-220ENST00000544293 WASHC2CQ9Y4E1 1318 aa15.4■□□□□ 0.06
C2CD3-220ENST00000544293 VWDEQ8N2E2 1590 aa15.39■□□□□ 0.05
C2CD3-220ENST00000544293 CPS1P31327 1500 aa15.38■□□□□ 0.05
C2CD3-220ENST00000544293 TIAM1Q13009 1591 aa15.38■□□□□ 0.05
C2CD3-220ENST00000544293 CEP162Q5TB80 1403 aa15.38■□□□□ 0.05
C2CD3-220ENST00000544293 MED14O60244 1454 aa15.38■□□□□ 0.05
C2CD3-220ENST00000544293 MED1Q15648 1581 aaPredicted RBP15.37■□□□□ 0.05
C2CD3-220ENST00000544293 NPHP4O75161 1426 aaPredicted RBP15.36■□□□□ 0.05
C2CD3-220ENST00000544293 RSPH4AQ5TD94 716 aa15.36■□□□□ 0.05
C2CD3-220ENST00000544293 RGS17Q9UGC6 210 aaPredicted RBP15.36■□□□□ 0.05
C2CD3-220ENST00000544293 CCDC141Q6ZP82 1450 aa15.33■□□□□ 0.04
C2CD3-220ENST00000544293 NLRP1Q9C000 1473 aa15.33■□□□□ 0.04
C2CD3-220ENST00000544293 KDM5DQ9BY66 1539 aa15.33■□□□□ 0.04
C2CD3-220ENST00000544293 ADGBQ8N7X0 1667 aa15.32■□□□□ 0.04
C2CD3-220ENST00000544293 LRRC7Q96NW7 1537 aa15.32■□□□□ 0.04
C2CD3-220ENST00000544293 LTKP29376 864 aa15.31■□□□□ 0.04
C2CD3-220ENST00000544293 NCOA2Q15596 1464 aa15.31■□□□□ 0.04
C2CD3-220ENST00000544293 UGGT1Q9NYU2 1555 aa15.3■□□□□ 0.04
C2CD3-220ENST00000544293 EHBP1L1Q8N3D4 1523 aa15.29■□□□□ 0.04
C2CD3-220ENST00000544293 CAMSAP2Q08AD1 1489 aa15.29■□□□□ 0.04
C2CD3-220ENST00000544293 TSPY4P0CV99 314 aa15.29■□□□□ 0.04
C2CD3-220ENST00000544293 TSPY10P0CW01 314 aa15.29■□□□□ 0.04
C2CD3-220ENST00000544293 ADRA2BP18089 450 aa15.29■□□□□ 0.04
C2CD3-220ENST00000544293 FAM135AQ9P2D6 1515 aa15.28■□□□□ 0.04
C2CD3-220ENST00000544293 DEPDC5O75140 1603 aa15.25■□□□□ 0.03
C2CD3-220ENST00000544293 ABCC3O15438 1527 aa15.25■□□□□ 0.03
C2CD3-220ENST00000544293 KANK4Q5T7N3 995 aaPredicted RBP15.24■□□□□ 0.03
C2CD3-220ENST00000544293 ERVK-7P63135 1459 aa15.24■□□□□ 0.03
C2CD3-220ENST00000544293 STRCP1A6NGW2 1772 aa15.24■□□□□ 0.03
C2CD3-220ENST00000544293 TXNDC2Q86VQ3 553 aa15.23■□□□□ 0.03
C2CD3-220ENST00000544293 POLR1AO95602 1720 aaPredicted RBP15.22■□□□□ 0.03
C2CD3-220ENST00000544293 ARHGAP23Q9P227 1491 aa15.21■□□□□ 0.03
C2CD3-220ENST00000544293 ARHGEF5Q12774 1597 aa15.21■□□□□ 0.03
C2CD3-220ENST00000544293 POTEAQ6S8J7 498 aa15.21■□□□□ 0.03
C2CD3-220ENST00000544293 MROH1Q8NDA8 1641 aa15.19■□□□□ 0.02
C2CD3-220ENST00000544293 SCAF11Q99590 1463 aaKnown RBP15.18■□□□□ 0.02
C2CD3-220ENST00000544293 IQGAP1P46940 1657 aa15.18■□□□□ 0.02
C2CD3-220ENST00000544293 FAM135BQ49AJ0 1406 aa15.17■□□□□ 0.02
C2CD3-220ENST00000544293 RNF17Q9BXT8 1623 aaKnown RBP15.17■□□□□ 0.02
C2CD3-220ENST00000544293 LRRC9Q6ZRR7 1453 aa15.16■□□□□ 0.02
C2CD3-220ENST00000544293 RBM33Q96EV2 1170 aaKnown RBP15.16■□□□□ 0.02
C2CD3-220ENST00000544293 SLIT1O75093 1534 aa15.16■□□□□ 0.02
C2CD3-220ENST00000544293 ARHGAP31Q2M1Z3 1444 aa15.16■□□□□ 0.02
C2CD3-220ENST00000544293 IDI1Q13907 227 aa15.15■□□□□ 0.02
C2CD3-220ENST00000544293 ZC3H13Q5T200 1668 aaKnown RBP15.15■□□□□ 0.02
C2CD3-220ENST00000544293 MAST1Q9Y2H9 1570 aa15.15■□□□□ 0.02
C2CD3-220ENST00000544293 TMEM2Q9UHN6 1383 aa15.14■□□□□ 0.01
C2CD3-220ENST00000544293 KCNA6P17658 529 aa15.14■□□□□ 0.01
C2CD3-220ENST00000544293 TMEM94Q12767 1356 aa15.13■□□□□ 0.01
C2CD3-220ENST00000544293 RRP7BPQ9NSQ0 103 aa15.13■□□□□ 0.01
C2CD3-220ENST00000544293 LOC105371045A0A1W2PR82 267 aa15.12■□□□□ 0.01
C2CD3-220ENST00000544293 EID1Q9Y6B2 187 aa15.12■□□□□ 0.01
C2CD3-220ENST00000544293 ABCC5O15440 1437 aa15.11■□□□□ 0.01
C2CD3-220ENST00000544293 SLC26A8Q96RN1 970 aa15.11■□□□□ 0.01
C2CD3-220ENST00000544293 UBR1Q8IWV7 1749 aa15.1■□□□□ 0.01
C2CD3-220ENST00000544293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.1■□□□□ 0.01
C2CD3-220ENST00000544293 SYNMO15061 1565 aa15.1■□□□□ 0.01
C2CD3-220ENST00000544293 KIF15Q9NS87 1388 aa15.1■□□□□ 0.01
C2CD3-220ENST00000544293 MYOM3Q5VTT5 1437 aa15.09■□□□□ 0.01
C2CD3-220ENST00000544293 PROSER2Q86WR7 435 aaPredicted RBP15.08■□□□□ 0
C2CD3-220ENST00000544293 VPS8Q8N3P4 1428 aa15.08■□□□□ 0
C2CD3-220ENST00000544293 DUOX2Q9NRD8 1548 aa15.07■□□□□ 0
C2CD3-220ENST00000544293 TET3O43151 1660 aa15.07■□□□□ 0
C2CD3-220ENST00000544293 EIF2AK4Q9P2K8 1649 aaKnown RBP15.06■□□□□ 0
C2CD3-220ENST00000544293 MAP3K1Q13233 1512 aa15.06■□□□□ 0
C2CD3-220ENST00000544293 XIRP1Q702N8 1843 aaKnown RBP15.05■□□□□ -0
C2CD3-220ENST00000544293 PRDM15P57071 1507 aaPredicted RBP15.04■□□□□ -0
C2CD3-220ENST00000544293 NOS1P29475 1434 aa15.04■□□□□ -0
C2CD3-220ENST00000544293 ERBINQ96RT1 1412 aa15.04■□□□□ -0
C2CD3-220ENST00000544293 STAG3Q9UJ98 1225 aa15.04■□□□□ -0
C2CD3-220ENST00000544293 SLAIN2Q9P270 581 aa15.03■□□□□ -0
C2CD3-220ENST00000544293 CHIC2Q9UKJ5 165 aa15.02■□□□□ -0
C2CD3-220ENST00000544293 CEP152O94986 1710 aa15.02□□□□□ -0.01
C2CD3-220ENST00000544293 PIK3C2BO00750 1634 aa15.01□□□□□ -0.01
C2CD3-220ENST00000544293 LMTK2Q8IWU2 1503 aa15.01□□□□□ -0.01
C2CD3-220ENST00000544293 EFCAB6Q5THR3 1501 aa15□□□□□ -0.01
C2CD3-220ENST00000544293 DAPK1P53355 1430 aa15□□□□□ -0.01
C2CD3-220ENST00000544293 SLC52A1Q9NWF4 448 aa14.99□□□□□ -0.01
C2CD3-220ENST00000544293 CFAP65Q6ZU64 1925 aaKnown RBP14.99□□□□□ -0.01
C2CD3-220ENST00000544293 ZFYVE9O95405 1425 aa14.97□□□□□ -0.01
C2CD3-220ENST00000544293 KANK1Q14678 1352 aa14.97□□□□□ -0.01
C2CD3-220ENST00000544293 JCADQ9P266 1359 aa14.97□□□□□ -0.01
C2CD3-220ENST00000544293 PIAS4Q8N2W9 510 aaPredicted RBP14.96□□□□□ -0.01
C2CD3-220ENST00000544293 ROBO1Q9Y6N7 1651 aa14.96□□□□□ -0.01
C2CD3-220ENST00000544293 UPF1Q92900 1129 aaKnown RBP eCLIP14.95□□□□□ -0.02
C2CD3-220ENST00000544293 TBX22Q9Y458 520 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms