RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ESF1Q9H501 851 aaKnown RBP21.7■■□□□ 1.07
TNFRSF1A-216ENST00000543995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.7■■□□□ 1.06
TNFRSF1A-216ENST00000543995 MADDQ8WXG6 1647 aa21.69■■□□□ 1.06
TNFRSF1A-216ENST00000543995 DEPDC5O75140 1603 aa21.67■■□□□ 1.06
TNFRSF1A-216ENST00000543995 RIMS1Q86UR5 1692 aaKnown RBP21.66■■□□□ 1.06
TNFRSF1A-216ENST00000543995 KDM4FA0A1W2PPD8 638 aa21.66■■□□□ 1.06
TNFRSF1A-216ENST00000543995 MROH1Q8NDA8 1641 aa21.66■■□□□ 1.06
TNFRSF1A-216ENST00000543995 SETD5Q9C0A6 1442 aa21.66■■□□□ 1.06
TNFRSF1A-216ENST00000543995 PPP6R1Q9UPN7 881 aa21.65■■□□□ 1.06
TNFRSF1A-216ENST00000543995 KANK1Q14678 1352 aa21.65■■□□□ 1.06
TNFRSF1A-216ENST00000543995 CLTCQ00610 1675 aaKnown RBP21.65■■□□□ 1.06
TNFRSF1A-216ENST00000543995 PRDM15P57071 1507 aaPredicted RBP21.65■■□□□ 1.06
TNFRSF1A-216ENST00000543995 WASHC2CQ9Y4E1 1318 aa21.64■■□□□ 1.05
TNFRSF1A-216ENST00000543995 UNC13BO14795 1591 aa21.63■■□□□ 1.05
TNFRSF1A-216ENST00000543995 KDM5DQ9BY66 1539 aa21.63■■□□□ 1.05
TNFRSF1A-216ENST00000543995 CNTLNQ9NXG0 1405 aa21.62■■□□□ 1.05
TNFRSF1A-216ENST00000543995 CEP152O94986 1710 aa21.62■■□□□ 1.05
TNFRSF1A-216ENST00000543995 ZC3H13Q5T200 1668 aaKnown RBP21.61■■□□□ 1.05
TNFRSF1A-216ENST00000543995 FAM135AQ9P2D6 1515 aa21.61■■□□□ 1.05
TNFRSF1A-216ENST00000543995 TRIM52Q96A61 297 aa21.6■■□□□ 1.05
TNFRSF1A-216ENST00000543995 PLPPR3Q6T4P5 718 aa21.59■■□□□ 1.05
TNFRSF1A-216ENST00000543995 ABCC3O15438 1527 aa21.59■■□□□ 1.05
TNFRSF1A-216ENST00000543995 NUP155O75694 1391 aa21.58■■□□□ 1.05
TNFRSF1A-216ENST00000543995 RAB3GAP2Q9H2M9 1393 aa21.58■■□□□ 1.05
TNFRSF1A-216ENST00000543995 MROH2AA6NES4 1674 aa21.58■■□□□ 1.05
TNFRSF1A-216ENST00000543995 VWDEQ8N2E2 1590 aa21.56■■□□□ 1.04
TNFRSF1A-216ENST00000543995 PTPRMP28827 1452 aa21.56■■□□□ 1.04
TNFRSF1A-216ENST00000543995 PCGF6Q9BYE7 350 aa21.55■■□□□ 1.04
TNFRSF1A-216ENST00000543995 ZMYM3Q14202 1370 aa21.55■■□□□ 1.04
TNFRSF1A-216ENST00000543995 CAMSAP1Q5T5Y3 1602 aa21.55■■□□□ 1.04
TNFRSF1A-216ENST00000543995 IQGAP3Q86VI3 1631 aa21.55■■□□□ 1.04
TNFRSF1A-216ENST00000543995 C3P01024 1663 aa21.54■■□□□ 1.04
TNFRSF1A-216ENST00000543995 ACIN1Q9UKV3 1341 aaKnown RBP21.53■■□□□ 1.04
TNFRSF1A-216ENST00000543995 CEBPAP49715 358 aaPredicted RBP21.53■■□□□ 1.04
TNFRSF1A-216ENST00000543995 LMTK2Q8IWU2 1503 aa21.52■■□□□ 1.04
TNFRSF1A-216ENST00000543995 TET3O43151 1660 aa21.5■■□□□ 1.03
TNFRSF1A-216ENST00000543995 CFAP65Q6ZU64 1925 aaKnown RBP21.49■■□□□ 1.03
TNFRSF1A-216ENST00000543995 EFCAB6Q5THR3 1501 aa21.48■■□□□ 1.03
TNFRSF1A-216ENST00000543995 HRCP23327 699 aa21.48■■□□□ 1.03
TNFRSF1A-216ENST00000543995 PZPP20742 1482 aa21.46■■□□□ 1.03
TNFRSF1A-216ENST00000543995 SLC4A1APQ9BWU0 796 aaKnown RBP21.46■■□□□ 1.03
TNFRSF1A-216ENST00000543995 NPATQ14207 1427 aa21.45■■□□□ 1.02
TNFRSF1A-216ENST00000543995 ARHGAP31Q2M1Z3 1444 aa21.45■■□□□ 1.02
TNFRSF1A-216ENST00000543995 E9PCH4 1651 aa21.44■■□□□ 1.02
TNFRSF1A-216ENST00000543995 FBXO31Q5XUX0 539 aaPredicted RBP21.44■■□□□ 1.02
TNFRSF1A-216ENST00000543995 AEBP2Q6ZN18 517 aaPredicted RBP21.43■■□□□ 1.02
TNFRSF1A-216ENST00000543995 MPHOSPH9Q99550 1183 aa21.42■■□□□ 1.02
TNFRSF1A-216ENST00000543995 PREX1Q8TCU6 1659 aa21.42■■□□□ 1.02
TNFRSF1A-216ENST00000543995 RPRD2Q5VT52 1461 aaKnown RBP21.41■■□□□ 1.02
TNFRSF1A-216ENST00000543995 PKD2Q13563 968 aa21.4■■□□□ 1.02
TNFRSF1A-216ENST00000543995 ERVK-7P63135 1459 aa21.39■■□□□ 1.02
TNFRSF1A-216ENST00000543995 SPATA31D1Q6ZQQ2 1576 aa21.38■■□□□ 1.01
TNFRSF1A-216ENST00000543995 SETD1BQ9UPS6 1966 aaKnown RBP21.38■■□□□ 1.01
TNFRSF1A-216ENST00000543995 TNRQ92752 1358 aa21.37■■□□□ 1.01
TNFRSF1A-216ENST00000543995 FOXD1Q16676 465 aa21.34■■□□□ 1.01
TNFRSF1A-216ENST00000543995 SPHKAPQ2M3C7 1700 aa21.34■■□□□ 1.01
TNFRSF1A-216ENST00000543995 NOS1P29475 1434 aa21.33■■□□□ 1
TNFRSF1A-216ENST00000543995 MYO3AQ8NEV4 1616 aa21.33■■□□□ 1
TNFRSF1A-216ENST00000543995 SYNMO15061 1565 aa21.31■■□□□ 1
TNFRSF1A-216ENST00000543995 UHRF1BP1Q6BDS2 1440 aa21.31■■□□□ 1
TNFRSF1A-216ENST00000543995 NLRP1Q9C000 1473 aa21.28■■□□□ 1
TNFRSF1A-216ENST00000543995 PTPRTO14522 1441 aa21.27■■□□□ 1
TNFRSF1A-216ENST00000543995 TRPM2O94759 1503 aa21.26■□□□□ 0.99
TNFRSF1A-216ENST00000543995 SLC52A1Q9NWF4 448 aa21.26■□□□□ 0.99
TNFRSF1A-216ENST00000543995 UGGT1Q9NYU2 1555 aa21.26■□□□□ 0.99
TNFRSF1A-216ENST00000543995 CEP170BQ9Y4F5 1589 aaPredicted RBP21.26■□□□□ 0.99
TNFRSF1A-216ENST00000543995 IDI1Q13907 227 aa21.25■□□□□ 0.99
TNFRSF1A-216ENST00000543995 ZNF142P52746 1687 aaPredicted RBP21.25■□□□□ 0.99
TNFRSF1A-216ENST00000543995 A2ML1A8K2U0 1454 aa21.24■□□□□ 0.99
TNFRSF1A-216ENST00000543995 STAG3Q9UJ98 1225 aa21.24■□□□□ 0.99
TNFRSF1A-216ENST00000543995 PIK3C2BO00750 1634 aa21.23■□□□□ 0.99
TNFRSF1A-216ENST00000543995 PLA2R1Q13018 1463 aa21.23■□□□□ 0.99
TNFRSF1A-216ENST00000543995 DHX57Q6P158 1386 aaKnown RBP21.23■□□□□ 0.99
TNFRSF1A-216ENST00000543995 LMTK3Q96Q04 1460 aa21.23■□□□□ 0.99
TNFRSF1A-216ENST00000543995 CLTCL1P53675 1640 aa21.21■□□□□ 0.99
TNFRSF1A-216ENST00000543995 CCDC144AA2RUR9 1427 aa21.21■□□□□ 0.99
TNFRSF1A-216ENST00000543995 CHGAP10645 457 aaKnown RBP21.2■□□□□ 0.98
TNFRSF1A-216ENST00000543995 UBR1Q8IWV7 1749 aa21.2■□□□□ 0.98
TNFRSF1A-216ENST00000543995 KIF1BO60333 1816 aa21.19■□□□□ 0.98
TNFRSF1A-216ENST00000543995 ANKRD30BQ9BXX2 1392 aa21.18■□□□□ 0.98
TNFRSF1A-216ENST00000543995 ADGRB3O60242 1522 aa21.17■□□□□ 0.98
TNFRSF1A-216ENST00000543995 HSPA2P54652 639 aa21.17■□□□□ 0.98
TNFRSF1A-216ENST00000543995 THEMISQ8N1K5 641 aaPredicted RBP21.17■□□□□ 0.98
TNFRSF1A-216ENST00000543995 MYO5BQ9ULV0 1848 aa21.17■□□□□ 0.98
TNFRSF1A-216ENST00000543995 KDM5AP29375 1690 aaKnown RBP21.17■□□□□ 0.98
TNFRSF1A-216ENST00000543995 TMEM131LA2VDJ0 1609 aa21.16■□□□□ 0.98
TNFRSF1A-216ENST00000543995 ZNF326Q5BKZ1 582 aaKnown RBP21.11■□□□□ 0.97
TNFRSF1A-216ENST00000543995 TMEM2Q9UHN6 1383 aa21.07■□□□□ 0.96
TNFRSF1A-216ENST00000543995 CCER1Q8TC90 406 aaPredicted RBP21.07■□□□□ 0.96
TNFRSF1A-216ENST00000543995 SLIT1O75093 1534 aa21.06■□□□□ 0.96
TNFRSF1A-216ENST00000543995 RGL3Q3MIN7 710 aa21.06■□□□□ 0.96
TNFRSF1A-216ENST00000543995 ANKLE2Q86XL3 938 aa21.05■□□□□ 0.96
TNFRSF1A-216ENST00000543995 SIN3AQ96ST3 1273 aa21.05■□□□□ 0.96
TNFRSF1A-216ENST00000543995 EID1Q9Y6B2 187 aa21.05■□□□□ 0.96
TNFRSF1A-216ENST00000543995 POLR1AO95602 1720 aaPredicted RBP21.05■□□□□ 0.96
TNFRSF1A-216ENST00000543995 HDGFP51858 240 aaKnown RBP21.04■□□□□ 0.96
TNFRSF1A-216ENST00000543995 NEUROD1Q13562 356 aa21.04■□□□□ 0.96
TNFRSF1A-216ENST00000543995 SPATA31E1Q6ZUB1 1445 aa21.04■□□□□ 0.96
TNFRSF1A-216ENST00000543995 ARHGAP23Q9P227 1491 aa21.04■□□□□ 0.96
TNFRSF1A-216ENST00000543995 TXNDC2Q86VQ3 553 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms