RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 KDM5DQ9BY66 1539 aa15.26■□□□□ 0.03
VEGFB-204ENST00000543462 ANKRD30AQ9BXX3 1397 aa15.24■□□□□ 0.03
VEGFB-204ENST00000543462 CEP152O94986 1710 aa15.24■□□□□ 0.03
VEGFB-204ENST00000543462 PTPRMP28827 1452 aa15.24■□□□□ 0.03
VEGFB-204ENST00000543462 MYT1LQ9UL68 1186 aa15.21■□□□□ 0.03
VEGFB-204ENST00000543462 ABCC3O15438 1527 aa15.21■□□□□ 0.03
VEGFB-204ENST00000543462 CAMSAP1Q5T5Y3 1602 aa15.21■□□□□ 0.02
VEGFB-204ENST00000543462 ARID4BQ4LE39 1312 aaPredicted RBP15.19■□□□□ 0.02
VEGFB-204ENST00000543462 CNTLNQ9NXG0 1405 aa15.19■□□□□ 0.02
VEGFB-204ENST00000543462 ANKRD50Q9ULJ7 1429 aa15.18■□□□□ 0.02
VEGFB-204ENST00000543462 LMTK2Q8IWU2 1503 aa15.18■□□□□ 0.02
VEGFB-204ENST00000543462 IQGAP3Q86VI3 1631 aa15.18■□□□□ 0.02
VEGFB-204ENST00000543462 HFM1A2PYH4 1435 aa15.17■□□□□ 0.02
VEGFB-204ENST00000543462 NAIPQ13075 1403 aa15.17■□□□□ 0.02
VEGFB-204ENST00000543462 CHIC2Q9UKJ5 165 aa15.17■□□□□ 0.02
VEGFB-204ENST00000543462 RRP7BPQ9NSQ0 103 aa15.16■□□□□ 0.02
VEGFB-204ENST00000543462 PPP6R1Q9UPN7 881 aa15.15■□□□□ 0.02
VEGFB-204ENST00000543462 TET3O43151 1660 aa15.15■□□□□ 0.02
VEGFB-204ENST00000543462 PREX1Q8TCU6 1659 aa15.15■□□□□ 0.02
VEGFB-204ENST00000543462 EFCAB6Q5THR3 1501 aa15.14■□□□□ 0.01
VEGFB-204ENST00000543462 KIF3BO15066 747 aa15.14■□□□□ 0.01
VEGFB-204ENST00000543462 MLECQ14165 292 aa15.14■□□□□ 0.01
VEGFB-204ENST00000543462 ZNF142P52746 1687 aaPredicted RBP15.13■□□□□ 0.01
VEGFB-204ENST00000543462 SETD1BQ9UPS6 1966 aaKnown RBP15.13■□□□□ 0.01
VEGFB-204ENST00000543462 PZPP20742 1482 aa15.13■□□□□ 0.01
VEGFB-204ENST00000543462 MYO3AQ8NEV4 1616 aa15.12■□□□□ 0.01
VEGFB-204ENST00000543462 SPATA31D1Q6ZQQ2 1576 aa15.11■□□□□ 0.01
VEGFB-204ENST00000543462 NPATQ14207 1427 aa15.11■□□□□ 0.01
VEGFB-204ENST00000543462 E9PCH4 1651 aa15.1■□□□□ 0.01
VEGFB-204ENST00000543462 ARHGAP31Q2M1Z3 1444 aa15.09■□□□□ 0.01
VEGFB-204ENST00000543462 ZMYM3Q14202 1370 aa15.09■□□□□ 0.01
VEGFB-204ENST00000543462 LMTK3Q96Q04 1460 aa15.08■□□□□ 0.01
VEGFB-204ENST00000543462 ITGAEP38570 1179 aa15.08■□□□□ 0
VEGFB-204ENST00000543462 GGT6Q6P531 493 aa15.08■□□□□ 0
VEGFB-204ENST00000543462 CFAP65Q6ZU64 1925 aaKnown RBP15.06■□□□□ 0
VEGFB-204ENST00000543462 ERVK-7P63135 1459 aa15.06■□□□□ 0
VEGFB-204ENST00000543462 RPRD2Q5VT52 1461 aaKnown RBP15.05■□□□□ -0
VEGFB-204ENST00000543462 SYNMO15061 1565 aa15.05■□□□□ -0
VEGFB-204ENST00000543462 PIK3C2BO00750 1634 aa15.03■□□□□ -0
VEGFB-204ENST00000543462 SPHKAPQ2M3C7 1700 aa15.03■□□□□ -0
VEGFB-204ENST00000543462 KDM5AP29375 1690 aaKnown RBP15.03■□□□□ -0
VEGFB-204ENST00000543462 CEP170BQ9Y4F5 1589 aaPredicted RBP15.02■□□□□ -0
VEGFB-204ENST00000543462 WASHC2CQ9Y4E1 1318 aa15.02■□□□□ -0
VEGFB-204ENST00000543462 CEBPAP49715 358 aaPredicted RBP15.02■□□□□ -0
VEGFB-204ENST00000543462 NOS1P29475 1434 aa15.01□□□□□ -0.01
VEGFB-204ENST00000543462 KANK1Q14678 1352 aa15.01□□□□□ -0.01
VEGFB-204ENST00000543462 UBR1Q8IWV7 1749 aa15□□□□□ -0.01
VEGFB-204ENST00000543462 SETD5Q9C0A6 1442 aa15□□□□□ -0.01
VEGFB-204ENST00000543462 NLRP1Q9C000 1473 aa14.98□□□□□ -0.01
VEGFB-204ENST00000543462 ESF1Q9H501 851 aaKnown RBP14.98□□□□□ -0.01
VEGFB-204ENST00000543462 STRCQ7RTU9 1775 aa14.98□□□□□ -0.01
VEGFB-204ENST00000543462 A2ML1A8K2U0 1454 aa14.97□□□□□ -0.01
VEGFB-204ENST00000543462 UHRF1BP1Q6BDS2 1440 aa14.97□□□□□ -0.01
VEGFB-204ENST00000543462 NUP155O75694 1391 aa14.97□□□□□ -0.01
VEGFB-204ENST00000543462 TNRQ92752 1358 aa14.97□□□□□ -0.01
VEGFB-204ENST00000543462 MYO5BQ9ULV0 1848 aa14.96□□□□□ -0.01
VEGFB-204ENST00000543462 AEBP2Q6ZN18 517 aaPredicted RBP14.96□□□□□ -0.01
VEGFB-204ENST00000543462 RAB3GAP2Q9H2M9 1393 aa14.96□□□□□ -0.02
VEGFB-204ENST00000543462 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.95□□□□□ -0.02
VEGFB-204ENST00000543462 TRPM2O94759 1503 aa14.95□□□□□ -0.02
VEGFB-204ENST00000543462 PTPRTO14522 1441 aa14.94□□□□□ -0.02
VEGFB-204ENST00000543462 FBXO31Q5XUX0 539 aaPredicted RBP14.94□□□□□ -0.02
VEGFB-204ENST00000543462 POLR1AO95602 1720 aaPredicted RBP14.94□□□□□ -0.02
VEGFB-204ENST00000543462 UGGT1Q9NYU2 1555 aa14.93□□□□□ -0.02
VEGFB-204ENST00000543462 ADGRB3O60242 1522 aa14.92□□□□□ -0.02
VEGFB-204ENST00000543462 CLTCL1P53675 1640 aa14.92□□□□□ -0.02
VEGFB-204ENST00000543462 TMEM131LA2VDJ0 1609 aa14.92□□□□□ -0.02
VEGFB-204ENST00000543462 PLA2R1Q13018 1463 aa14.91□□□□□ -0.02
VEGFB-204ENST00000543462 NEURL4Q96JN8 1562 aa14.9□□□□□ -0.02
VEGFB-204ENST00000543462 PLPPR3Q6T4P5 718 aa14.89□□□□□ -0.03
VEGFB-204ENST00000543462 ARHGAP23Q9P227 1491 aa14.89□□□□□ -0.03
VEGFB-204ENST00000543462 SLIT1O75093 1534 aa14.88□□□□□ -0.03
VEGFB-204ENST00000543462 HRCP23327 699 aa14.88□□□□□ -0.03
VEGFB-204ENST00000543462 ACIN1Q9UKV3 1341 aaKnown RBP14.87□□□□□ -0.03
VEGFB-204ENST00000543462 KIF1BO60333 1816 aa14.87□□□□□ -0.03
VEGFB-204ENST00000543462 TRIM26Q12899 539 aaPredicted RBP14.84□□□□□ -0.03
VEGFB-204ENST00000543462 IFT172Q9UG01 1749 aa14.83□□□□□ -0.03
VEGFB-204ENST00000543462 HSPA2P54652 639 aa14.82□□□□□ -0.04
VEGFB-204ENST00000543462 ZFYVE9O95405 1425 aa14.81□□□□□ -0.04
VEGFB-204ENST00000543462 MED14O60244 1454 aa14.81□□□□□ -0.04
VEGFB-204ENST00000543462 IQGAP1P46940 1657 aa14.81□□□□□ -0.04
VEGFB-204ENST00000543462 PKD2Q13563 968 aa14.8□□□□□ -0.04
VEGFB-204ENST00000543462 IDI1Q13907 227 aa14.8□□□□□ -0.04
VEGFB-204ENST00000543462 TRIM52Q96A61 297 aa14.8□□□□□ -0.04
VEGFB-204ENST00000543462 MPHOSPH9Q99550 1183 aa14.8□□□□□ -0.04
VEGFB-204ENST00000543462 SLC4A1APQ9BWU0 796 aaKnown RBP14.8□□□□□ -0.04
VEGFB-204ENST00000543462 SLC52A1Q9NWF4 448 aa14.8□□□□□ -0.04
VEGFB-204ENST00000543462 PPLO60437 1756 aa14.8□□□□□ -0.04
VEGFB-204ENST00000543462 NEXMIFQ5QGS0 1516 aa14.78□□□□□ -0.04
VEGFB-204ENST00000543462 TMEM2Q9UHN6 1383 aa14.77□□□□□ -0.04
VEGFB-204ENST00000543462 SCAF11Q99590 1463 aaKnown RBP14.76□□□□□ -0.05
VEGFB-204ENST00000543462 SPATA31E1Q6ZUB1 1445 aa14.76□□□□□ -0.05
VEGFB-204ENST00000543462 NRXN3Q9Y4C0 1643 aa14.76□□□□□ -0.05
VEGFB-204ENST00000543462 ANKRD30BQ9BXX2 1392 aa14.75□□□□□ -0.05
VEGFB-204ENST00000543462 SETD1AO15047 1707 aaKnown RBP14.75□□□□□ -0.05
VEGFB-204ENST00000543462 FOXD1Q16676 465 aa14.74□□□□□ -0.05
VEGFB-204ENST00000543462 THEMISQ8N1K5 641 aaPredicted RBP14.73□□□□□ -0.05
VEGFB-204ENST00000543462 STRCP1A6NGW2 1772 aa14.73□□□□□ -0.05
VEGFB-204ENST00000543462 CCDC144AA2RUR9 1427 aa14.72□□□□□ -0.05
VEGFB-204ENST00000543462 SETBP1Q9Y6X0 1596 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms