RNA–Protein interactions for RNA: ENST00000542933.5

LINC01089-209, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 1,220 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-209ENST00000542933 RRP7BPQ9NSQ0 103 aa23.62■■□□□ 1.37
LINC01089-209ENST00000542933 PPP6R1Q9UPN7 881 aa23.62■■□□□ 1.37
LINC01089-209ENST00000542933 CLTCQ00610 1675 aaKnown RBP23.62■■□□□ 1.37
LINC01089-209ENST00000542933 C3P01024 1663 aa23.61■■□□□ 1.37
LINC01089-209ENST00000542933 PTPRKQ15262 1439 aa23.61■■□□□ 1.37
LINC01089-209ENST00000542933 KDM5DQ9BY66 1539 aa23.59■■□□□ 1.37
LINC01089-209ENST00000542933 ROCK1Q13464 1354 aa23.58■■□□□ 1.37
LINC01089-209ENST00000542933 ZC3H13Q5T200 1668 aaKnown RBP23.57■■□□□ 1.36
LINC01089-209ENST00000542933 MROH1Q8NDA8 1641 aa23.56■■□□□ 1.36
LINC01089-209ENST00000542933 DEPDC5O75140 1603 aa23.55■■□□□ 1.36
LINC01089-209ENST00000542933 PRDM15P57071 1507 aaPredicted RBP23.55■■□□□ 1.36
LINC01089-209ENST00000542933 ITGAEP38570 1179 aa23.53■■□□□ 1.36
LINC01089-209ENST00000542933 PLPPR3Q6T4P5 718 aa23.52■■□□□ 1.36
LINC01089-209ENST00000542933 ZMYM3Q14202 1370 aa23.52■■□□□ 1.36
LINC01089-209ENST00000542933 ANKRD50Q9ULJ7 1429 aa23.51■■□□□ 1.35
LINC01089-209ENST00000542933 CEBPAP49715 358 aaPredicted RBP23.51■■□□□ 1.35
LINC01089-209ENST00000542933 PREX1Q8TCU6 1659 aa23.5■■□□□ 1.35
LINC01089-209ENST00000542933 ABCC3O15438 1527 aa23.49■■□□□ 1.35
LINC01089-209ENST00000542933 SETD1BQ9UPS6 1966 aaKnown RBP23.49■■□□□ 1.35
LINC01089-209ENST00000542933 WASHC2CQ9Y4E1 1318 aa23.49■■□□□ 1.35
LINC01089-209ENST00000542933 CEP152O94986 1710 aa23.48■■□□□ 1.35
LINC01089-209ENST00000542933 NPATQ14207 1427 aa23.48■■□□□ 1.35
LINC01089-209ENST00000542933 LMTK3Q96Q04 1460 aa23.45■■□□□ 1.34
LINC01089-209ENST00000542933 CAMSAP1Q5T5Y3 1602 aa23.44■■□□□ 1.34
LINC01089-209ENST00000542933 PZPP20742 1482 aa23.44■■□□□ 1.34
LINC01089-209ENST00000542933 VWDEQ8N2E2 1590 aa23.44■■□□□ 1.34
LINC01089-209ENST00000542933 KANK1Q14678 1352 aa23.43■■□□□ 1.34
LINC01089-209ENST00000542933 GCC2Q8IWJ2 1684 aa23.43■■□□□ 1.34
LINC01089-209ENST00000542933 UNC13BO14795 1591 aa23.43■■□□□ 1.34
LINC01089-209ENST00000542933 UHRF1BP1Q6BDS2 1440 aa23.41■■□□□ 1.34
LINC01089-209ENST00000542933 LMTK2Q8IWU2 1503 aa23.4■■□□□ 1.34
LINC01089-209ENST00000542933 MYO3AQ8NEV4 1616 aa23.38■■□□□ 1.33
LINC01089-209ENST00000542933 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.38■■□□□ 1.332e-10■□□□□ 10.5
LINC01089-209ENST00000542933 HFM1A2PYH4 1435 aa23.36■■□□□ 1.33
LINC01089-209ENST00000542933 NAIPQ13075 1403 aa23.36■■□□□ 1.33
LINC01089-209ENST00000542933 ARHGAP31Q2M1Z3 1444 aa23.36■■□□□ 1.33
LINC01089-209ENST00000542933 ZNF142P52746 1687 aaPredicted RBP23.35■■□□□ 1.33
LINC01089-209ENST00000542933 EFCAB6Q5THR3 1501 aa23.34■■□□□ 1.33
LINC01089-209ENST00000542933 SPATA31D1Q6ZQQ2 1576 aa23.34■■□□□ 1.33
LINC01089-209ENST00000542933 IQGAP3Q86VI3 1631 aa23.33■■□□□ 1.32
LINC01089-209ENST00000542933 TET3O43151 1660 aa23.32■■□□□ 1.32
LINC01089-209ENST00000542933 ERVK-7P63135 1459 aa23.31■■□□□ 1.32
LINC01089-209ENST00000542933 TNRQ92752 1358 aa23.31■■□□□ 1.32
LINC01089-209ENST00000542933 CEP170BQ9Y4F5 1589 aaPredicted RBP23.31■■□□□ 1.32
LINC01089-209ENST00000542933 FBXO31Q5XUX0 539 aaPredicted RBP23.3■■□□□ 1.32
LINC01089-209ENST00000542933 CFAP65Q6ZU64 1925 aaKnown RBP23.29■■□□□ 1.32
LINC01089-209ENST00000542933 A2ML1A8K2U0 1454 aa23.26■■□□□ 1.31
LINC01089-209ENST00000542933 RPRD2Q5VT52 1461 aaKnown RBP23.26■■□□□ 1.31
LINC01089-209ENST00000542933 NLRP1Q9C000 1473 aa23.26■■□□□ 1.31
LINC01089-209ENST00000542933 HSPA2P54652 639 aa23.25■■□□□ 1.31
LINC01089-209ENST00000542933 NUP155O75694 1391 aa23.25■■□□□ 1.31
LINC01089-209ENST00000542933 E9PCH4 1651 aa23.22■■□□□ 1.31
LINC01089-209ENST00000542933 NOS1P29475 1434 aa23.19■■□□□ 1.3
LINC01089-209ENST00000542933 SYNMO15061 1565 aa23.18■■□□□ 1.3
LINC01089-209ENST00000542933 UGGT1Q9NYU2 1555 aa23.18■■□□□ 1.3
LINC01089-209ENST00000542933 STRCQ7RTU9 1775 aa23.17■■□□□ 1.3
LINC01089-209ENST00000542933 PLA2R1Q13018 1463 aa23.17■■□□□ 1.3
LINC01089-209ENST00000542933 SETD5Q9C0A6 1442 aa23.14■■□□□ 1.29
LINC01089-209ENST00000542933 UBR1Q8IWV7 1749 aa23.13■■□□□ 1.29
LINC01089-209ENST00000542933 KDM5AP29375 1690 aaKnown RBP23.13■■□□□ 1.29
LINC01089-209ENST00000542933 PIK3C2BO00750 1634 aa23.12■■□□□ 1.29
LINC01089-209ENST00000542933 SPHKAPQ2M3C7 1700 aa23.11■■□□□ 1.29
LINC01089-209ENST00000542933 ACIN1Q9UKV3 1341 aaKnown RBP23.1■■□□□ 1.29
LINC01089-209ENST00000542933 TRIM52Q96A61 297 aa23.1■■□□□ 1.29
LINC01089-209ENST00000542933 POLR1AO95602 1720 aaPredicted RBP23.09■■□□□ 1.29
LINC01089-209ENST00000542933 THEMISQ8N1K5 641 aaPredicted RBP23.08■■□□□ 1.29
LINC01089-209ENST00000542933 SLC52A1Q9NWF4 448 aa23.08■■□□□ 1.29
LINC01089-209ENST00000542933 ADGRB3O60242 1522 aa23.07■■□□□ 1.28
LINC01089-209ENST00000542933 RAB3GAP2Q9H2M9 1393 aa23.06■■□□□ 1.28
LINC01089-209ENST00000542933 PKD2Q13563 968 aa23.05■■□□□ 1.28
LINC01089-209ENST00000542933 DMRT2Q9Y5R5 561 aa23.05■■□□□ 1.28
LINC01089-209ENST00000542933 IDI1Q13907 227 aa23.04■■□□□ 1.28
LINC01089-209ENST00000542933 PTPRTO14522 1441 aa23.03■■□□□ 1.28
LINC01089-209ENST00000542933 SLC4A1APQ9BWU0 796 aaKnown RBP23.03■■□□□ 1.28
LINC01089-209ENST00000542933 SLIT1O75093 1534 aa23.02■■□□□ 1.28
LINC01089-209ENST00000542933 TRPM2O94759 1503 aa23.02■■□□□ 1.28
LINC01089-209ENST00000542933 ARHGAP23Q9P227 1491 aa23.01■■□□□ 1.27
LINC01089-209ENST00000542933 NEURL4Q96JN8 1562 aa23.01■■□□□ 1.27
LINC01089-209ENST00000542933 STAG3Q9UJ98 1225 aa23■■□□□ 1.27
LINC01089-209ENST00000542933 NCKAP5LQ9HCH0 1330 aa23■■□□□ 1.27
LINC01089-209ENST00000542933 TMEM131LA2VDJ0 1609 aa23■■□□□ 1.27
LINC01089-209ENST00000542933 MYO5BQ9ULV0 1848 aa22.99■■□□□ 1.27
LINC01089-209ENST00000542933 ANKLE2Q86XL3 938 aa22.98■■□□□ 1.27
LINC01089-209ENST00000542933 HRCP23327 699 aa22.96■■□□□ 1.27
LINC01089-209ENST00000542933 TMEM2Q9UHN6 1383 aa22.96■■□□□ 1.27
LINC01089-209ENST00000542933 MED14O60244 1454 aa22.96■■□□□ 1.27
LINC01089-209ENST00000542933 SCAF11Q99590 1463 aaKnown RBP22.96■■□□□ 1.27
LINC01089-209ENST00000542933 CLTCL1P53675 1640 aa22.96■■□□□ 1.27
LINC01089-209ENST00000542933 IQGAP1P46940 1657 aa22.94■■□□□ 1.26
LINC01089-209ENST00000542933 MPHOSPH9Q99550 1183 aa22.94■■□□□ 1.26
LINC01089-209ENST00000542933 KIF1BO60333 1816 aa22.92■■□□□ 1.26
LINC01089-209ENST00000542933 NPHP4O75161 1426 aaPredicted RBP22.91■■□□□ 1.26
LINC01089-209ENST00000542933 EID1Q9Y6B2 187 aa22.9■■□□□ 1.26
LINC01089-209ENST00000542933 CHGAP10645 457 aaKnown RBP22.88■■□□□ 1.25
LINC01089-209ENST00000542933 TXNDC2Q86VQ3 553 aa22.88■■□□□ 1.25
LINC01089-209ENST00000542933 ZFYVE9O95405 1425 aa22.88■■□□□ 1.25
LINC01089-209ENST00000542933 LTKP29376 864 aa22.87■■□□□ 1.25
LINC01089-209ENST00000542933 RIMS2Q9UQ26 1411 aa22.86■■□□□ 1.25
LINC01089-209ENST00000542933 TRIM26Q12899 539 aaPredicted RBP22.86■■□□□ 1.25
LINC01089-209ENST00000542933 FOXD1Q16676 465 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms