RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 MLH3Q9UHC1 1453 aa18.72■□□□□ 0.59
CACNA1C-IT3-201ENST00000542680 AFAP1Q8N556 730 aa18.72■□□□□ 0.59
CACNA1C-IT3-201ENST00000542680 CDC42BPBQ9Y5S2 1711 aa18.71■□□□□ 0.59
CACNA1C-IT3-201ENST00000542680 EFCAB2Q5VUJ9 269 aa18.7■□□□□ 0.58
CACNA1C-IT3-201ENST00000542680 VWDEQ8N2E2 1590 aa18.7■□□□□ 0.58
CACNA1C-IT3-201ENST00000542680 ZMYM3Q14202 1370 aa18.69■□□□□ 0.58
CACNA1C-IT3-201ENST00000542680 CLTCQ00610 1675 aaKnown RBP18.66■□□□□ 0.58
CACNA1C-IT3-201ENST00000542680 CFDP1Q9UEE9 299 aaPredicted RBP18.66■□□□□ 0.58
CACNA1C-IT3-201ENST00000542680 DNMT1P26358 1616 aaKnown RBP18.66■□□□□ 0.58
CACNA1C-IT3-201ENST00000542680 RNF17Q9BXT8 1623 aaKnown RBP18.66■□□□□ 0.58
CACNA1C-IT3-201ENST00000542680 KIDINS220Q9ULH0 1771 aa18.65■□□□□ 0.58
CACNA1C-IT3-201ENST00000542680 PLEKHH2Q8IVE3 1493 aa18.65■□□□□ 0.58
CACNA1C-IT3-201ENST00000542680 ARHGAP5Q13017 1502 aa18.65■□□□□ 0.58
CACNA1C-IT3-201ENST00000542680 CAMSAP2Q08AD1 1489 aa18.65■□□□□ 0.58
CACNA1C-IT3-201ENST00000542680 MYT1LQ9UL68 1186 aa18.63■□□□□ 0.57
CACNA1C-IT3-201ENST00000542680 STRCP1A6NGW2 1772 aa18.61■□□□□ 0.57
CACNA1C-IT3-201ENST00000542680 SAMD9LQ8IVG5 1584 aa18.61■□□□□ 0.57
CACNA1C-IT3-201ENST00000542680 A2ML1A8K2U0 1454 aa18.61■□□□□ 0.57
CACNA1C-IT3-201ENST00000542680 ARHGEF5Q12774 1597 aa18.6■□□□□ 0.57
CACNA1C-IT3-201ENST00000542680 KIAA1107Q9UPP5 1409 aa18.6■□□□□ 0.57
CACNA1C-IT3-201ENST00000542680 FAM50AQ14320 339 aaKnown RBP18.59■□□□□ 0.57
CACNA1C-IT3-201ENST00000542680 PCGF6Q9BYE7 350 aa18.59■□□□□ 0.57
CACNA1C-IT3-201ENST00000542680 ABCC1P33527 1531 aa18.58■□□□□ 0.56
CACNA1C-IT3-201ENST00000542680 CROCC2H7BZ55 1655 aa18.57■□□□□ 0.56
CACNA1C-IT3-201ENST00000542680 SYNMO15061 1565 aa18.57■□□□□ 0.56
CACNA1C-IT3-201ENST00000542680 LRRC7Q96NW7 1537 aa18.56■□□□□ 0.56
CACNA1C-IT3-201ENST00000542680 UPF1Q92900 1129 aaKnown RBP eCLIP18.56■□□□□ 0.56
CACNA1C-IT3-201ENST00000542680 RSPH4AQ5TD94 716 aa18.55■□□□□ 0.56
CACNA1C-IT3-201ENST00000542680 DAPK1P53355 1430 aa18.54■□□□□ 0.56
CACNA1C-IT3-201ENST00000542680 MBD5Q9P267 1494 aa18.53■□□□□ 0.56
CACNA1C-IT3-201ENST00000542680 SYCP2Q9BX26 1530 aa18.53■□□□□ 0.56
CACNA1C-IT3-201ENST00000542680 CCDC141Q6ZP82 1450 aa18.52■□□□□ 0.56
CACNA1C-IT3-201ENST00000542680 ABCC5O15440 1437 aa18.51■□□□□ 0.55
CACNA1C-IT3-201ENST00000542680 ZNF777Q9ULD5 760 aaPredicted RBP18.51■□□□□ 0.55
CACNA1C-IT3-201ENST00000542680 DEPDC5O75140 1603 aa18.51■□□□□ 0.55
CACNA1C-IT3-201ENST00000542680 ADGBQ8N7X0 1667 aa18.5■□□□□ 0.55
CACNA1C-IT3-201ENST00000542680 ZNF644Q9H582 1327 aaPredicted RBP18.5■□□□□ 0.55
CACNA1C-IT3-201ENST00000542680 MED14O60244 1454 aa18.5■□□□□ 0.55
CACNA1C-IT3-201ENST00000542680 MAST1Q9Y2H9 1570 aa18.5■□□□□ 0.55
CACNA1C-IT3-201ENST00000542680 ROCK1Q13464 1354 aa18.49■□□□□ 0.55
CACNA1C-IT3-201ENST00000542680 PLXNC1O60486 1568 aa18.49■□□□□ 0.55
CACNA1C-IT3-201ENST00000542680 IQGAP1P46940 1657 aa18.48■□□□□ 0.55
CACNA1C-IT3-201ENST00000542680 ADGRL2O95490 1459 aa18.48■□□□□ 0.55
CACNA1C-IT3-201ENST00000542680 XIRP1Q702N8 1843 aaKnown RBP18.47■□□□□ 0.55
CACNA1C-IT3-201ENST00000542680 NPHP4O75161 1426 aaPredicted RBP18.46■□□□□ 0.55
CACNA1C-IT3-201ENST00000542680 GCC2Q8IWJ2 1684 aa18.45■□□□□ 0.54
CACNA1C-IT3-201ENST00000542680 HFM1A2PYH4 1435 aa18.45■□□□□ 0.54
CACNA1C-IT3-201ENST00000542680 ITGAEP38570 1179 aa18.42■□□□□ 0.54
CACNA1C-IT3-201ENST00000542680 ANKLE2Q86XL3 938 aa18.42■□□□□ 0.54
CACNA1C-IT3-201ENST00000542680 RTEL1-TNFRSF6BF6WH68 1400 aa18.41■□□□□ 0.54
CACNA1C-IT3-201ENST00000542680 TSPY4P0CV99 314 aa18.41■□□□□ 0.54
CACNA1C-IT3-201ENST00000542680 TSPY10P0CW01 314 aa18.41■□□□□ 0.54
CACNA1C-IT3-201ENST00000542680 FAM135BQ49AJ0 1406 aa18.4■□□□□ 0.54
CACNA1C-IT3-201ENST00000542680 HNRNPMP52272 730 aaKnown RBP eCLIP18.4■□□□□ 0.54
CACNA1C-IT3-201ENST00000542680 ANKRD30AQ9BXX3 1397 aa18.4■□□□□ 0.54
CACNA1C-IT3-201ENST00000542680 INO80Q9ULG1 1556 aaPredicted RBP18.39■□□□□ 0.53
CACNA1C-IT3-201ENST00000542680 ACIN1Q9UKV3 1341 aaKnown RBP18.39■□□□□ 0.53
CACNA1C-IT3-201ENST00000542680 SETD5Q9C0A6 1442 aa18.39■□□□□ 0.53
CACNA1C-IT3-201ENST00000542680 NAIPQ13075 1403 aa18.38■□□□□ 0.53
CACNA1C-IT3-201ENST00000542680 ZC3H13Q5T200 1668 aaKnown RBP18.38■□□□□ 0.53
CACNA1C-IT3-201ENST00000542680 HRCP23327 699 aa18.37■□□□□ 0.53
CACNA1C-IT3-201ENST00000542680 TNRQ92752 1358 aa18.37■□□□□ 0.53
CACNA1C-IT3-201ENST00000542680 ROBO1Q9Y6N7 1651 aa18.36■□□□□ 0.53
CACNA1C-IT3-201ENST00000542680 ATP7AQ04656 1500 aa18.35■□□□□ 0.53
CACNA1C-IT3-201ENST00000542680 A2MP01023 1474 aa18.35■□□□□ 0.53
CACNA1C-IT3-201ENST00000542680 UGGT1Q9NYU2 1555 aa18.33■□□□□ 0.52
CACNA1C-IT3-201ENST00000542680 SPAG9O60271 1321 aaKnown RBP18.32■□□□□ 0.52
CACNA1C-IT3-201ENST00000542680 GGT6Q6P531 493 aa18.32■□□□□ 0.52
CACNA1C-IT3-201ENST00000542680 RAB3GAP2Q9H2M9 1393 aa18.31■□□□□ 0.52
CACNA1C-IT3-201ENST00000542680 CHIC2Q9UKJ5 165 aa18.31■□□□□ 0.52
CACNA1C-IT3-201ENST00000542680 DUOX2Q9NRD8 1548 aa18.31■□□□□ 0.52
CACNA1C-IT3-201ENST00000542680 KIF15Q9NS87 1388 aa18.3■□□□□ 0.52
CACNA1C-IT3-201ENST00000542680 FAM135AQ9P2D6 1515 aa18.3■□□□□ 0.52
CACNA1C-IT3-201ENST00000542680 THEMISQ8N1K5 641 aaPredicted RBP18.3■□□□□ 0.52
CACNA1C-IT3-201ENST00000542680 TRIM52Q96A61 297 aa18.3■□□□□ 0.52
CACNA1C-IT3-201ENST00000542680 PZPP20742 1482 aa18.3■□□□□ 0.52
CACNA1C-IT3-201ENST00000542680 NLRP1Q9C000 1473 aa18.29■□□□□ 0.52
CACNA1C-IT3-201ENST00000542680 FBXO31Q5XUX0 539 aaPredicted RBP18.29■□□□□ 0.52
CACNA1C-IT3-201ENST00000542680 ERBINQ96RT1 1412 aa18.29■□□□□ 0.52
CACNA1C-IT3-201ENST00000542680 ANKRD50Q9ULJ7 1429 aa18.28■□□□□ 0.52
CACNA1C-IT3-201ENST00000542680 RRP7BPQ9NSQ0 103 aa18.27■□□□□ 0.52
CACNA1C-IT3-201ENST00000542680 CDK12Q9NYV4 1490 aaPredicted RBP18.26■□□□□ 0.51
CACNA1C-IT3-201ENST00000542680 PHLPP1O60346 1717 aa18.26■□□□□ 0.51
CACNA1C-IT3-201ENST00000542680 EIF2AK4Q9P2K8 1649 aaKnown RBP18.26■□□□□ 0.51
CACNA1C-IT3-201ENST00000542680 LRP6O75581 1613 aa18.25■□□□□ 0.51
CACNA1C-IT3-201ENST00000542680 KDM5DQ9BY66 1539 aa18.24■□□□□ 0.51
CACNA1C-IT3-201ENST00000542680 JCADQ9P266 1359 aa18.23■□□□□ 0.51
CACNA1C-IT3-201ENST00000542680 ZNF772Q68DY9 489 aaPredicted RBP18.22■□□□□ 0.51
CACNA1C-IT3-201ENST00000542680 UNC13BO14795 1591 aa18.21■□□□□ 0.51
CACNA1C-IT3-201ENST00000542680 COL16A1Q07092 1604 aaPredicted RBP18.2■□□□□ 0.5
CACNA1C-IT3-201ENST00000542680 DHX29Q7Z478 1369 aaKnown RBP18.19■□□□□ 0.5
CACNA1C-IT3-201ENST00000542680 SETBP1Q9Y6X0 1596 aa18.19■□□□□ 0.5
CACNA1C-IT3-201ENST00000542680 RXRBP28702 533 aa18.16■□□□□ 0.5
CACNA1C-IT3-201ENST00000542680 CLSPNQ9HAW4 1339 aa18.15■□□□□ 0.5
CACNA1C-IT3-201ENST00000542680 DHX57Q6P158 1386 aaKnown RBP18.15■□□□□ 0.5
CACNA1C-IT3-201ENST00000542680 UBR1Q8IWV7 1749 aa18.14■□□□□ 0.49
CACNA1C-IT3-201ENST00000542680 SCAF11Q99590 1463 aaKnown RBP18.14■□□□□ 0.49
CACNA1C-IT3-201ENST00000542680 TMEM94Q12767 1356 aa18.13■□□□□ 0.49
CACNA1C-IT3-201ENST00000542680 PRDM15P57071 1507 aaPredicted RBP18.13■□□□□ 0.49
CACNA1C-IT3-201ENST00000542680 IQGAP3Q86VI3 1631 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms