RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 PTPRKQ15262 1439 aa21.57■■□□□ 1.04
DDX11-221ENST00000542661 FAM135AQ9P2D6 1515 aa21.57■■□□□ 1.04
DDX11-221ENST00000542661 ITGAEP38570 1179 aa21.56■■□□□ 1.04
DDX11-221ENST00000542661 RNF17Q9BXT8 1623 aaKnown RBP21.55■■□□□ 1.04
DDX11-221ENST00000542661 MROH2AA6NES4 1674 aa21.55■■□□□ 1.04
DDX11-221ENST00000542661 CLTCQ00610 1675 aaKnown RBP21.53■■□□□ 1.04
DDX11-221ENST00000542661 PLPPR3Q6T4P5 718 aa21.52■■□□□ 1.04
DDX11-221ENST00000542661 WASHC2CQ9Y4E1 1318 aa21.52■■□□□ 1.03
DDX11-221ENST00000542661 ZMYM3Q14202 1370 aa21.51■■□□□ 1.03
DDX11-221ENST00000542661 KDM5DQ9BY66 1539 aa21.51■■□□□ 1.03
DDX11-221ENST00000542661 C3P01024 1663 aa21.5■■□□□ 1.03
DDX11-221ENST00000542661 ANKRD50Q9ULJ7 1429 aa21.5■■□□□ 1.03
DDX11-221ENST00000542661 CEBPAP49715 358 aaPredicted RBP21.5■■□□□ 1.03
DDX11-221ENST00000542661 DEPDC5O75140 1603 aa21.47■■□□□ 1.03
DDX11-221ENST00000542661 KANK1Q14678 1352 aa21.47■■□□□ 1.03
DDX11-221ENST00000542661 ZC3H13Q5T200 1668 aaKnown RBP21.47■■□□□ 1.03
DDX11-221ENST00000542661 SETD1BQ9UPS6 1966 aaKnown RBP21.47■■□□□ 1.03
DDX11-221ENST00000542661 PRDM15P57071 1507 aaPredicted RBP21.46■■□□□ 1.03
DDX11-221ENST00000542661 MROH1Q8NDA8 1641 aa21.46■■□□□ 1.03
DDX11-221ENST00000542661 NPATQ14207 1427 aa21.45■■□□□ 1.02
DDX11-221ENST00000542661 ABCC3O15438 1527 aa21.44■■□□□ 1.02
DDX11-221ENST00000542661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.43■■□□□ 1.02
DDX11-221ENST00000542661 PREX1Q8TCU6 1659 aa21.4■■□□□ 1.02
DDX11-221ENST00000542661 PZPP20742 1482 aa21.4■■□□□ 1.02
DDX11-221ENST00000542661 LMTK3Q96Q04 1460 aa21.38■■□□□ 1.01
DDX11-221ENST00000542661 CEP152O94986 1710 aa21.38■■□□□ 1.01
DDX11-221ENST00000542661 UHRF1BP1Q6BDS2 1440 aa21.38■■□□□ 1.01
DDX11-221ENST00000542661 VWDEQ8N2E2 1590 aa21.37■■□□□ 1.01
DDX11-221ENST00000542661 HFM1A2PYH4 1435 aa21.36■■□□□ 1.01
DDX11-221ENST00000542661 NAIPQ13075 1403 aa21.36■■□□□ 1.01
DDX11-221ENST00000542661 CAMSAP1Q5T5Y3 1602 aa21.36■■□□□ 1.01
DDX11-221ENST00000542661 LMTK2Q8IWU2 1503 aa21.35■■□□□ 1.01
DDX11-221ENST00000542661 ARHGAP31Q2M1Z3 1444 aa21.35■■□□□ 1.01
DDX11-221ENST00000542661 UNC13BO14795 1591 aa21.35■■□□□ 1.01
DDX11-221ENST00000542661 GCC2Q8IWJ2 1684 aa21.34■■□□□ 1.01
DDX11-221ENST00000542661 FBXO31Q5XUX0 539 aaPredicted RBP21.32■■□□□ 1
DDX11-221ENST00000542661 TNRQ92752 1358 aa21.31■■□□□ 1
DDX11-221ENST00000542661 NUP155O75694 1391 aa21.29■■□□□ 1
DDX11-221ENST00000542661 MYO3AQ8NEV4 1616 aa21.28■■□□□ 1
DDX11-221ENST00000542661 EFCAB6Q5THR3 1501 aa21.28■■□□□ 1
DDX11-221ENST00000542661 SPATA31D1Q6ZQQ2 1576 aa21.27■■□□□ 1
DDX11-221ENST00000542661 ERVK-7P63135 1459 aa21.27■■□□□ 1
DDX11-221ENST00000542661 IQGAP3Q86VI3 1631 aa21.27■■□□□ 1
DDX11-221ENST00000542661 TET3O43151 1660 aa21.27■■□□□ 1
DDX11-221ENST00000542661 RPRD2Q5VT52 1461 aaKnown RBP21.26■□□□□ 0.99
DDX11-221ENST00000542661 NLRP1Q9C000 1473 aa21.26■□□□□ 0.99
DDX11-221ENST00000542661 ZNF142P52746 1687 aaPredicted RBP21.25■□□□□ 0.99
DDX11-221ENST00000542661 HSPA2P54652 639 aa21.25■□□□□ 0.99
DDX11-221ENST00000542661 CFAP65Q6ZU64 1925 aaKnown RBP21.25■□□□□ 0.99
DDX11-221ENST00000542661 CEP170BQ9Y4F5 1589 aaPredicted RBP21.24■□□□□ 0.99
DDX11-221ENST00000542661 ILDR1Q86SU0 546 aaPredicted RBP21.24■□□□□ 0.99
DDX11-221ENST00000542661 A2ML1A8K2U0 1454 aa21.24■□□□□ 0.99
DDX11-221ENST00000542661 ACIN1Q9UKV3 1341 aaKnown RBP21.24■□□□□ 0.99
DDX11-221ENST00000542661 TRIM52Q96A61 297 aa21.19■□□□□ 0.98
DDX11-221ENST00000542661 SETD5Q9C0A6 1442 aa21.19■□□□□ 0.98
DDX11-221ENST00000542661 NOS1P29475 1434 aa21.18■□□□□ 0.98
DDX11-221ENST00000542661 THEMISQ8N1K5 641 aaPredicted RBP21.17■□□□□ 0.98
DDX11-221ENST00000542661 E9PCH4 1651 aa21.15■□□□□ 0.98
DDX11-221ENST00000542661 UGGT1Q9NYU2 1555 aa21.15■□□□□ 0.98
DDX11-221ENST00000542661 SLC52A1Q9NWF4 448 aa21.15■□□□□ 0.98
DDX11-221ENST00000542661 DMRT2Q9Y5R5 561 aa21.14■□□□□ 0.97
DDX11-221ENST00000542661 PLA2R1Q13018 1463 aa21.13■□□□□ 0.97
DDX11-221ENST00000542661 SYNMO15061 1565 aa21.13■□□□□ 0.97
DDX11-221ENST00000542661 PKD2Q13563 968 aa21.11■□□□□ 0.97
DDX11-221ENST00000542661 SLC4A1APQ9BWU0 796 aaKnown RBP21.11■□□□□ 0.97
DDX11-221ENST00000542661 STRCQ7RTU9 1775 aa21.1■□□□□ 0.97
DDX11-221ENST00000542661 IDI1Q13907 227 aa21.1■□□□□ 0.97
DDX11-221ENST00000542661 STAG3Q9UJ98 1225 aa21.09■□□□□ 0.97
DDX11-221ENST00000542661 UBR1Q8IWV7 1749 aa21.09■□□□□ 0.97
DDX11-221ENST00000542661 RAB3GAP2Q9H2M9 1393 aa21.09■□□□□ 0.97
DDX11-221ENST00000542661 KDM5AP29375 1690 aaKnown RBP21.09■□□□□ 0.97
DDX11-221ENST00000542661 HRCP23327 699 aa21.08■□□□□ 0.97
DDX11-221ENST00000542661 PIK3C2BO00750 1634 aa21.07■□□□□ 0.96
DDX11-221ENST00000542661 PTPRTO14522 1441 aa21.06■□□□□ 0.96
DDX11-221ENST00000542661 ANKLE2Q86XL3 938 aa21.06■□□□□ 0.96
DDX11-221ENST00000542661 SPHKAPQ2M3C7 1700 aa21.05■□□□□ 0.96
DDX11-221ENST00000542661 NCKAP5LQ9HCH0 1330 aa21.04■□□□□ 0.96
DDX11-221ENST00000542661 MPHOSPH9Q99550 1183 aa21.04■□□□□ 0.96
DDX11-221ENST00000542661 ADGRB3O60242 1522 aa21.03■□□□□ 0.96
DDX11-221ENST00000542661 POLR1AO95602 1720 aaPredicted RBP21.01■□□□□ 0.95
DDX11-221ENST00000542661 SLIT1O75093 1534 aa21.01■□□□□ 0.95
DDX11-221ENST00000542661 TRPM2O94759 1503 aa21■□□□□ 0.95
DDX11-221ENST00000542661 EID1Q9Y6B2 187 aa21■□□□□ 0.95
DDX11-221ENST00000542661 ARHGAP23Q9P227 1491 aa21■□□□□ 0.95
DDX11-221ENST00000542661 TMEM2Q9UHN6 1383 aa20.99■□□□□ 0.95
DDX11-221ENST00000542661 TRIM26Q12899 539 aaPredicted RBP20.99■□□□□ 0.95
DDX11-221ENST00000542661 FBXO41Q8TF61 875 aa20.98■□□□□ 0.95
DDX11-221ENST00000542661 TMEM131LA2VDJ0 1609 aa20.97■□□□□ 0.95
DDX11-221ENST00000542661 MED14O60244 1454 aa20.96■□□□□ 0.95
DDX11-221ENST00000542661 SCAF11Q99590 1463 aaKnown RBP20.96■□□□□ 0.95
DDX11-221ENST00000542661 CHGAP10645 457 aaKnown RBP20.96■□□□□ 0.95
DDX11-221ENST00000542661 HDGFP51858 240 aaKnown RBP20.96■□□□□ 0.95
DDX11-221ENST00000542661 TXNDC2Q86VQ3 553 aa20.96■□□□□ 0.95
DDX11-221ENST00000542661 NEURL4Q96JN8 1562 aa20.95■□□□□ 0.94
DDX11-221ENST00000542661 NPHP4O75161 1426 aaPredicted RBP20.94■□□□□ 0.94
DDX11-221ENST00000542661 LTKP29376 864 aa20.93■□□□□ 0.94
DDX11-221ENST00000542661 FOXD1Q16676 465 aa20.93■□□□□ 0.94
DDX11-221ENST00000542661 CLTCL1P53675 1640 aa20.93■□□□□ 0.94
DDX11-221ENST00000542661 MYO5BQ9ULV0 1848 aa20.92■□□□□ 0.94
DDX11-221ENST00000542661 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms