RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 DHX29Q7Z478 1369 aaKnown RBP12.55□□□□□ -0.4
THBS3-210ENST00000541576 ANKRD30BQ9BXX2 1392 aa12.55□□□□□ -0.4
THBS3-210ENST00000541576 RICTORQ6R327 1708 aa12.55□□□□□ -0.4
THBS3-210ENST00000541576 FAM135AQ9P2D6 1515 aa12.55□□□□□ -0.4
THBS3-210ENST00000541576 MAGI2Q86UL8 1455 aa12.54□□□□□ -0.4
THBS3-210ENST00000541576 YTHDC1Q96MU7 727 aaKnown RBP12.54□□□□□ -0.4
THBS3-210ENST00000541576 TONSLQ96HA7 1378 aa12.53□□□□□ -0.4
THBS3-210ENST00000541576 A2MP01023 1474 aa12.52□□□□□ -0.4
THBS3-210ENST00000541576 IQGAP3Q86VI3 1631 aa12.52□□□□□ -0.4
THBS3-210ENST00000541576 EIF2AK4Q9P2K8 1649 aaKnown RBP12.52□□□□□ -0.41
THBS3-210ENST00000541576 FRMPD1Q5SYB0 1578 aa12.51□□□□□ -0.41
THBS3-210ENST00000541576 KIF3BO15066 747 aa12.51□□□□□ -0.41
THBS3-210ENST00000541576 ABCA6Q8N139 1617 aa12.51□□□□□ -0.41
THBS3-210ENST00000541576 DEPDC5O75140 1603 aa12.5□□□□□ -0.41
THBS3-210ENST00000541576 ZMYM4Q5VZL5 1548 aa12.49□□□□□ -0.41
THBS3-210ENST00000541576 RPRD2Q5VT52 1461 aaKnown RBP12.49□□□□□ -0.41
THBS3-210ENST00000541576 PPP1R15AO75807 674 aaPredicted RBP12.49□□□□□ -0.41
THBS3-210ENST00000541576 DIP2CQ9Y2E4 1556 aa12.48□□□□□ -0.41
THBS3-210ENST00000541576 KANK1Q14678 1352 aa12.48□□□□□ -0.41
THBS3-210ENST00000541576 YEATS2Q9ULM3 1422 aa12.48□□□□□ -0.41
THBS3-210ENST00000541576 ZNF316A6NFI3 1004 aaPredicted RBP12.47□□□□□ -0.41
THBS3-210ENST00000541576 PRDM15P57071 1507 aaPredicted RBP12.47□□□□□ -0.41
THBS3-210ENST00000541576 MROH1Q8NDA8 1641 aa12.46□□□□□ -0.42
THBS3-210ENST00000541576 VWDEQ8N2E2 1590 aa12.45□□□□□ -0.42
THBS3-210ENST00000541576 RNF17Q9BXT8 1623 aaKnown RBP12.45□□□□□ -0.42
THBS3-210ENST00000541576 COL17A1Q9UMD9 1497 aaPredicted RBP12.45□□□□□ -0.42
THBS3-210ENST00000541576 TRHP20396 242 aaPredicted RBP12.45□□□□□ -0.42
THBS3-210ENST00000541576 BCORL1Q5H9F3 1711 aa12.44□□□□□ -0.42
THBS3-210ENST00000541576 L3MBTL2Q969R5 705 aa12.43□□□□□ -0.42
THBS3-210ENST00000541576 TET3O43151 1660 aa12.43□□□□□ -0.42
THBS3-210ENST00000541576 GGT6Q6P531 493 aa12.43□□□□□ -0.42
THBS3-210ENST00000541576 ATP10AO60312 1499 aa12.42□□□□□ -0.42
THBS3-210ENST00000541576 MYT1Q01538 1121 aa12.42□□□□□ -0.42
THBS3-210ENST00000541576 PLA2R1Q13018 1463 aa12.42□□□□□ -0.42
THBS3-210ENST00000541576 CCDC144AA2RUR9 1427 aa12.42□□□□□ -0.42
THBS3-210ENST00000541576 E9PCH4 1651 aa12.41□□□□□ -0.42
THBS3-210ENST00000541576 LMTK2Q8IWU2 1503 aa12.4□□□□□ -0.42
THBS3-210ENST00000541576 CENPBP07199 599 aaPredicted RBP12.4□□□□□ -0.42
THBS3-210ENST00000541576 REREQ9P2R6 1566 aa12.39□□□□□ -0.43
THBS3-210ENST00000541576 EFCAB6Q5THR3 1501 aa12.39□□□□□ -0.43
THBS3-210ENST00000541576 CEP152O94986 1710 aa12.38□□□□□ -0.43
THBS3-210ENST00000541576 WASHC2CQ9Y4E1 1318 aa12.38□□□□□ -0.43
THBS3-210ENST00000541576 ARHGEF40Q8TER5 1519 aa12.38□□□□□ -0.43
THBS3-210ENST00000541576 DIEXFQ68CQ4 756 aaKnown RBP12.37□□□□□ -0.43
THBS3-210ENST00000541576 PTPRTO14522 1441 aa12.37□□□□□ -0.43
THBS3-210ENST00000541576 ABCC3O15438 1527 aa12.37□□□□□ -0.43
THBS3-210ENST00000541576 TRPM2O94759 1503 aa12.37□□□□□ -0.43
THBS3-210ENST00000541576 SPHKAPQ2M3C7 1700 aa12.36□□□□□ -0.43
THBS3-210ENST00000541576 AGLP35573 1532 aa12.36□□□□□ -0.43
THBS3-210ENST00000541576 NBPF8Q3BBV2 869 aa12.35□□□□□ -0.43
THBS3-210ENST00000541576 ZC3H13Q5T200 1668 aaKnown RBP12.34□□□□□ -0.43
THBS3-210ENST00000541576 NPATQ14207 1427 aa12.33□□□□□ -0.43
THBS3-210ENST00000541576 CAMSAP1Q5T5Y3 1602 aa12.33□□□□□ -0.44
THBS3-210ENST00000541576 RGL3Q3MIN7 710 aa12.32□□□□□ -0.44
THBS3-210ENST00000541576 HIRIP3Q9BW71 556 aaPredicted RBP12.32□□□□□ -0.44
THBS3-210ENST00000541576 SIGLEC1Q9BZZ2 1709 aa12.32□□□□□ -0.44
THBS3-210ENST00000541576 DCAF11Q8TEB1 546 aa12.32□□□□□ -0.44
THBS3-210ENST00000541576 CLTCL1P53675 1640 aa12.31□□□□□ -0.44
THBS3-210ENST00000541576 PPP6R1Q9UPN7 881 aa12.31□□□□□ -0.44
THBS3-210ENST00000541576 ZNF326Q5BKZ1 582 aaKnown RBP12.31□□□□□ -0.44
THBS3-210ENST00000541576 ARHGAP31Q2M1Z3 1444 aa12.3□□□□□ -0.44
THBS3-210ENST00000541576 CFAP65Q6ZU64 1925 aaKnown RBP12.3□□□□□ -0.44
THBS3-210ENST00000541576 UHRF1BP1Q6BDS2 1440 aa12.3□□□□□ -0.44
THBS3-210ENST00000541576 SPATA31E1Q6ZUB1 1445 aa12.3□□□□□ -0.44
THBS3-210ENST00000541576 KDM2AQ9Y2K7 1162 aa12.3□□□□□ -0.44
THBS3-210ENST00000541576 CNTLNQ9NXG0 1405 aa12.29□□□□□ -0.44
THBS3-210ENST00000541576 MLECQ14165 292 aa12.29□□□□□ -0.44
THBS3-210ENST00000541576 UGGT1Q9NYU2 1555 aa12.28□□□□□ -0.44
THBS3-210ENST00000541576 ARID4BQ4LE39 1312 aaPredicted RBP12.28□□□□□ -0.44
THBS3-210ENST00000541576 NOS1P29475 1434 aa12.27□□□□□ -0.44
THBS3-210ENST00000541576 KIF1BO60333 1816 aa12.26□□□□□ -0.45
THBS3-210ENST00000541576 NEURL4Q96JN8 1562 aa12.26□□□□□ -0.45
THBS3-210ENST00000541576 PRAG1Q86YV5 1406 aa12.25□□□□□ -0.45
THBS3-210ENST00000541576 EIF4G2P78344 907 aaKnown RBP eCLIP12.25□□□□□ -0.45
THBS3-210ENST00000541576 CLTCQ00610 1675 aaKnown RBP12.25□□□□□ -0.45
THBS3-210ENST00000541576 RALGAPBQ86X10 1494 aa12.25□□□□□ -0.45
THBS3-210ENST00000541576 ESF1Q9H501 851 aaKnown RBP12.25□□□□□ -0.45
THBS3-210ENST00000541576 HSPA5P11021 654 aaKnown RBP12.24□□□□□ -0.45
THBS3-210ENST00000541576 SYNMO15061 1565 aa12.24□□□□□ -0.45
THBS3-210ENST00000541576 PREX1Q8TCU6 1659 aa12.23□□□□□ -0.45
THBS3-210ENST00000541576 STAC3Q96MF2 364 aa12.23□□□□□ -0.45
THBS3-210ENST00000541576 CHGAP10645 457 aaKnown RBP12.22□□□□□ -0.45
THBS3-210ENST00000541576 ADGRB3O60242 1522 aa12.22□□□□□ -0.45
THBS3-210ENST00000541576 PIK3C2BO00750 1634 aa12.22□□□□□ -0.45
THBS3-210ENST00000541576 SLC52A1Q9NWF4 448 aa12.22□□□□□ -0.45
THBS3-210ENST00000541576 ERVK-7P63135 1459 aa12.21□□□□□ -0.45
THBS3-210ENST00000541576 FBXO31Q5XUX0 539 aaPredicted RBP12.21□□□□□ -0.45
THBS3-210ENST00000541576 MROH2AA6NES4 1674 aa12.21□□□□□ -0.45
THBS3-210ENST00000541576 CARD11Q9BXL7 1154 aa12.21□□□□□ -0.46
THBS3-210ENST00000541576 ROCK2O75116 1388 aaKnown RBP12.2□□□□□ -0.46
THBS3-210ENST00000541576 TRPM1Q7Z4N2 1603 aa12.2□□□□□ -0.46
THBS3-210ENST00000541576 IDI1Q13907 227 aa12.2□□□□□ -0.46
THBS3-210ENST00000541576 ZMYM3Q14202 1370 aa12.19□□□□□ -0.46
THBS3-210ENST00000541576 USP47Q96K76 1375 aa12.19□□□□□ -0.46
THBS3-210ENST00000541576 MIER1Q8N108 512 aa12.19□□□□□ -0.46
THBS3-210ENST00000541576 MADDQ8WXG6 1647 aa12.19□□□□□ -0.46
THBS3-210ENST00000541576 DDX10Q13206 875 aaKnown RBP12.18□□□□□ -0.46
THBS3-210ENST00000541576 SPATA31D1Q6ZQQ2 1576 aa12.18□□□□□ -0.46
THBS3-210ENST00000541576 MYOM2P54296 1465 aa12.18□□□□□ -0.46
THBS3-210ENST00000541576 GPRASP1Q5JY77 1395 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms