RNA–Protein interactions for RNA: ENST00000541372.1

SLC3A2-216, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 269 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-216ENST00000541372 FER1L4A9Z1Z3 1794 aa23.47■■□□□ 1.35
SLC3A2-216ENST00000541372 ADGRL2O95490 1459 aa23.46■■□□□ 1.35
SLC3A2-216ENST00000541372 ERBINQ96RT1 1412 aa23.43■■□□□ 1.34
SLC3A2-216ENST00000541372 ROCK1Q13464 1354 aa23.43■■□□□ 1.34
SLC3A2-216ENST00000541372 CROCC2H7BZ55 1655 aa23.43■■□□□ 1.34
SLC3A2-216ENST00000541372 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.42■■□□□ 1.347e-13■□□□□ 9.9
SLC3A2-216ENST00000541372 FBXO31Q5XUX0 539 aaPredicted RBP23.38■■□□□ 1.33
SLC3A2-216ENST00000541372 ANKRD50Q9ULJ7 1429 aa23.38■■□□□ 1.33
SLC3A2-216ENST00000541372 NPATQ14207 1427 aa23.36■■□□□ 1.33
SLC3A2-216ENST00000541372 EIF2AK4Q9P2K8 1649 aaKnown RBP23.35■■□□□ 1.33
SLC3A2-216ENST00000541372 HSPA2P54652 639 aa23.35■■□□□ 1.33
SLC3A2-216ENST00000541372 LMTK3Q96Q04 1460 aa23.35■■□□□ 1.33
SLC3A2-216ENST00000541372 KDM5DQ9BY66 1539 aa23.33■■□□□ 1.33
SLC3A2-216ENST00000541372 FAM135AQ9P2D6 1515 aa23.33■■□□□ 1.33
SLC3A2-216ENST00000541372 C3P01024 1663 aa23.33■■□□□ 1.33
SLC3A2-216ENST00000541372 CLTCQ00610 1675 aaKnown RBP23.33■■□□□ 1.33
SLC3A2-216ENST00000541372 RNF17Q9BXT8 1623 aaKnown RBP23.33■■□□□ 1.32
SLC3A2-216ENST00000541372 KANK1Q14678 1352 aa23.32■■□□□ 1.32
SLC3A2-216ENST00000541372 MROH2AA6NES4 1674 aa23.32■■□□□ 1.32
SLC3A2-216ENST00000541372 UHRF1BP1Q6BDS2 1440 aa23.3■■□□□ 1.32
SLC3A2-216ENST00000541372 SETD1BQ9UPS6 1966 aaKnown RBP23.3■■□□□ 1.32
SLC3A2-216ENST00000541372 ABCC3O15438 1527 aa23.29■■□□□ 1.32
SLC3A2-216ENST00000541372 MROH1Q8NDA8 1641 aa23.29■■□□□ 1.32
SLC3A2-216ENST00000541372 PZPP20742 1482 aa23.28■■□□□ 1.32
SLC3A2-216ENST00000541372 TNRQ92752 1358 aa23.25■■□□□ 1.31
SLC3A2-216ENST00000541372 PRDM15P57071 1507 aaPredicted RBP23.23■■□□□ 1.31
SLC3A2-216ENST00000541372 ARHGAP31Q2M1Z3 1444 aa23.23■■□□□ 1.31
SLC3A2-216ENST00000541372 NAIPQ13075 1403 aa23.21■■□□□ 1.31
SLC3A2-216ENST00000541372 DEPDC5O75140 1603 aa23.2■■□□□ 1.3
SLC3A2-216ENST00000541372 VWDEQ8N2E2 1590 aa23.19■■□□□ 1.3
SLC3A2-216ENST00000541372 NUP155O75694 1391 aa23.19■■□□□ 1.3
SLC3A2-216ENST00000541372 PREX1Q8TCU6 1659 aa23.19■■□□□ 1.3
SLC3A2-216ENST00000541372 LMTK2Q8IWU2 1503 aa23.18■■□□□ 1.3
SLC3A2-216ENST00000541372 ZC3H13Q5T200 1668 aaKnown RBP23.16■■□□□ 1.3
SLC3A2-216ENST00000541372 HFM1A2PYH4 1435 aa23.16■■□□□ 1.3
SLC3A2-216ENST00000541372 ERVK-7P63135 1459 aa23.15■■□□□ 1.3
SLC3A2-216ENST00000541372 THEMISQ8N1K5 641 aaPredicted RBP23.13■■□□□ 1.29
SLC3A2-216ENST00000541372 DMRT2Q9Y5R5 561 aa23.13■■□□□ 1.29
SLC3A2-216ENST00000541372 A2ML1A8K2U0 1454 aa23.12■■□□□ 1.29
SLC3A2-216ENST00000541372 NLRP1Q9C000 1473 aa23.11■■□□□ 1.29
SLC3A2-216ENST00000541372 SPATA31D1Q6ZQQ2 1576 aa23.11■■□□□ 1.29
SLC3A2-216ENST00000541372 CAMSAP1Q5T5Y3 1602 aa23.11■■□□□ 1.29
SLC3A2-216ENST00000541372 CEP152O94986 1710 aa23.11■■□□□ 1.29
SLC3A2-216ENST00000541372 IDI1Q13907 227 aa23.1■■□□□ 1.29
SLC3A2-216ENST00000541372 TRIM52Q96A61 297 aa23.1■■□□□ 1.29
SLC3A2-216ENST00000541372 NCKAP5LQ9HCH0 1330 aa23.09■■□□□ 1.29
SLC3A2-216ENST00000541372 PKD2Q13563 968 aa23.08■■□□□ 1.29
SLC3A2-216ENST00000541372 SLC52A1Q9NWF4 448 aa23.08■■□□□ 1.29
SLC3A2-216ENST00000541372 UNC13BO14795 1591 aa23.07■■□□□ 1.28
SLC3A2-216ENST00000541372 CEP170BQ9Y4F5 1589 aaPredicted RBP23.07■■□□□ 1.28
SLC3A2-216ENST00000541372 NOS1P29475 1434 aa23.07■■□□□ 1.28
SLC3A2-216ENST00000541372 MYO3AQ8NEV4 1616 aa23.06■■□□□ 1.28
SLC3A2-216ENST00000541372 RPRD2Q5VT52 1461 aaKnown RBP23.05■■□□□ 1.28
SLC3A2-216ENST00000541372 EFCAB6Q5THR3 1501 aa23.05■■□□□ 1.28
SLC3A2-216ENST00000541372 ANKLE2Q86XL3 938 aa23.04■■□□□ 1.28
SLC3A2-216ENST00000541372 STAG3Q9UJ98 1225 aa23.02■■□□□ 1.28
SLC3A2-216ENST00000541372 PLA2R1Q13018 1463 aa23.02■■□□□ 1.28
SLC3A2-216ENST00000541372 UGGT1Q9NYU2 1555 aa23.01■■□□□ 1.27
SLC3A2-216ENST00000541372 SETD5Q9C0A6 1442 aa23■■□□□ 1.27
SLC3A2-216ENST00000541372 CFAP65Q6ZU64 1925 aaKnown RBP23■■□□□ 1.27
SLC3A2-216ENST00000541372 IQGAP3Q86VI3 1631 aa23■■□□□ 1.27
SLC3A2-216ENST00000541372 PTPRTO14522 1441 aa22.99■■□□□ 1.27
SLC3A2-216ENST00000541372 SLC4A1APQ9BWU0 796 aaKnown RBP22.99■■□□□ 1.27
SLC3A2-216ENST00000541372 ACIN1Q9UKV3 1341 aaKnown RBP22.99■■□□□ 1.27
SLC3A2-216ENST00000541372 TET3O43151 1660 aa22.99■■□□□ 1.27
SLC3A2-216ENST00000541372 ZNF142P52746 1687 aaPredicted RBP22.99■■□□□ 1.27
SLC3A2-216ENST00000541372 STRCQ7RTU9 1775 aa22.98■■□□□ 1.27
SLC3A2-216ENST00000541372 GCC2Q8IWJ2 1684 aa22.97■■□□□ 1.27
SLC3A2-216ENST00000541372 TXNDC2Q86VQ3 553 aa22.95■■□□□ 1.26
SLC3A2-216ENST00000541372 MPHOSPH9Q99550 1183 aa22.95■■□□□ 1.26
SLC3A2-216ENST00000541372 LTKP29376 864 aa22.94■■□□□ 1.26
SLC3A2-216ENST00000541372 SYNMO15061 1565 aa22.93■■□□□ 1.26
SLC3A2-216ENST00000541372 HRCP23327 699 aa22.93■■□□□ 1.26
SLC3A2-216ENST00000541372 EID1Q9Y6B2 187 aa22.92■■□□□ 1.26
SLC3A2-216ENST00000541372 TMEM2Q9UHN6 1383 aa22.91■■□□□ 1.26
SLC3A2-216ENST00000541372 E9PCH4 1651 aa22.9■■□□□ 1.26
SLC3A2-216ENST00000541372 RAB3GAP2Q9H2M9 1393 aa22.9■■□□□ 1.26
SLC3A2-216ENST00000541372 CHGAP10645 457 aaKnown RBP22.9■■□□□ 1.26
SLC3A2-216ENST00000541372 FOXD1Q16676 465 aa22.88■■□□□ 1.25
SLC3A2-216ENST00000541372 ARHGAP23Q9P227 1491 aa22.87■■□□□ 1.25
SLC3A2-216ENST00000541372 PIK3C2BO00750 1634 aa22.86■■□□□ 1.25
SLC3A2-216ENST00000541372 HDGFP51858 240 aaKnown RBP22.86■■□□□ 1.25
SLC3A2-216ENST00000541372 MED14O60244 1454 aa22.85■■□□□ 1.25
SLC3A2-216ENST00000541372 NPHP4O75161 1426 aaPredicted RBP22.85■■□□□ 1.25
SLC3A2-216ENST00000541372 SLIT1O75093 1534 aa22.85■■□□□ 1.25
SLC3A2-216ENST00000541372 UBR1Q8IWV7 1749 aa22.85■■□□□ 1.25
SLC3A2-216ENST00000541372 CERKQ8TCT0 537 aa22.83■■□□□ 1.25
SLC3A2-216ENST00000541372 SCAF11Q99590 1463 aaKnown RBP22.82■■□□□ 1.24
SLC3A2-216ENST00000541372 ZNF335Q9H4Z2 1342 aaPredicted RBP22.82■■□□□ 1.24
SLC3A2-216ENST00000541372 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.8■■□□□ 1.24
SLC3A2-216ENST00000541372 ADGRB3O60242 1522 aa22.8■■□□□ 1.24
SLC3A2-216ENST00000541372 NEURL4Q96JN8 1562 aa22.8■■□□□ 1.24
SLC3A2-216ENST00000541372 KDM5AP29375 1690 aaKnown RBP22.78■■□□□ 1.24
SLC3A2-216ENST00000541372 RIMS2Q9UQ26 1411 aa22.77■■□□□ 1.24
SLC3A2-216ENST00000541372 TMEM131LA2VDJ0 1609 aa22.76■■□□□ 1.23
SLC3A2-216ENST00000541372 TRIM26Q12899 539 aaPredicted RBP22.76■■□□□ 1.23
SLC3A2-216ENST00000541372 ZNF326Q5BKZ1 582 aaKnown RBP22.76■■□□□ 1.23
SLC3A2-216ENST00000541372 NUTM2DQ5VT03 806 aaPredicted RBP22.76■■□□□ 1.23
SLC3A2-216ENST00000541372 ZFYVE9O95405 1425 aa22.75■■□□□ 1.23
SLC3A2-216ENST00000541372 PPP1R15AO75807 674 aaPredicted RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms