RNA–Protein interactions for RNA: ENST00000541329.1

NPIPB4-213, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 432 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-213ENST00000541329 NUP155O75694 1391 aa10.94□□□□□ -0.66
NPIPB4-213ENST00000541329 KIDINS220Q9ULH0 1771 aa10.94□□□□□ -0.66
NPIPB4-213ENST00000541329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.93□□□□□ -0.664e-14■■■□□ 17.5
NPIPB4-213ENST00000541329 PPP6R1Q9UPN7 881 aa10.93□□□□□ -0.66
NPIPB4-213ENST00000541329 KDM5DQ9BY66 1539 aa10.93□□□□□ -0.66
NPIPB4-213ENST00000541329 TONSLQ96HA7 1378 aa10.92□□□□□ -0.66
NPIPB4-213ENST00000541329 PPRC1Q5VV67 1664 aaKnown RBP10.92□□□□□ -0.66
NPIPB4-213ENST00000541329 ZNF316A6NFI3 1004 aaPredicted RBP10.92□□□□□ -0.66
NPIPB4-213ENST00000541329 CERKQ8TCT0 537 aa10.92□□□□□ -0.66
NPIPB4-213ENST00000541329 RTEL1-TNFRSF6BF6WH68 1400 aa10.92□□□□□ -0.66
NPIPB4-213ENST00000541329 FAM135AQ9P2D6 1515 aa10.91□□□□□ -0.66
NPIPB4-213ENST00000541329 PKD2Q13563 968 aa10.91□□□□□ -0.66
NPIPB4-213ENST00000541329 RICTORQ6R327 1708 aa10.91□□□□□ -0.66
NPIPB4-213ENST00000541329 ZNF518AQ6AHZ1 1483 aa10.91□□□□□ -0.66
NPIPB4-213ENST00000541329 NEO1Q92859 1461 aa10.91□□□□□ -0.66
NPIPB4-213ENST00000541329 ERBINQ96RT1 1412 aa10.91□□□□□ -0.66
NPIPB4-213ENST00000541329 IQGAP3Q86VI3 1631 aa10.91□□□□□ -0.66
NPIPB4-213ENST00000541329 POGZQ7Z3K3 1410 aa10.9□□□□□ -0.66
NPIPB4-213ENST00000541329 KDM5CP41229 1560 aa10.89□□□□□ -0.67
NPIPB4-213ENST00000541329 ANKRD30BQ9BXX2 1392 aa10.89□□□□□ -0.67
NPIPB4-213ENST00000541329 ABCA6Q8N139 1617 aa10.88□□□□□ -0.67
NPIPB4-213ENST00000541329 EIF2AK4Q9P2K8 1649 aaKnown RBP10.87□□□□□ -0.67
NPIPB4-213ENST00000541329 COL17A1Q9UMD9 1497 aaPredicted RBP10.87□□□□□ -0.67
NPIPB4-213ENST00000541329 RAPGEF3O95398 923 aa10.87□□□□□ -0.67
NPIPB4-213ENST00000541329 TIMELESSQ9UNS1 1208 aa10.87□□□□□ -0.67
NPIPB4-213ENST00000541329 DEPDC5O75140 1603 aa10.87□□□□□ -0.67
NPIPB4-213ENST00000541329 RPRD2Q5VT52 1461 aaKnown RBP10.86□□□□□ -0.67
NPIPB4-213ENST00000541329 MAGI2Q86UL8 1455 aa10.86□□□□□ -0.67
NPIPB4-213ENST00000541329 FRMPD1Q5SYB0 1578 aa10.86□□□□□ -0.67
NPIPB4-213ENST00000541329 CEP152O94986 1710 aa10.85□□□□□ -0.67
NPIPB4-213ENST00000541329 PPP1R15AO75807 674 aaPredicted RBP10.85□□□□□ -0.67
NPIPB4-213ENST00000541329 ADRA2BP18089 450 aa10.85□□□□□ -0.67
NPIPB4-213ENST00000541329 E9PCH4 1651 aa10.85□□□□□ -0.67
NPIPB4-213ENST00000541329 KIF3BO15066 747 aa10.84□□□□□ -0.67
NPIPB4-213ENST00000541329 DHX29Q7Z478 1369 aaKnown RBP10.84□□□□□ -0.67
NPIPB4-213ENST00000541329 A2MP01023 1474 aa10.84□□□□□ -0.67
NPIPB4-213ENST00000541329 TEX14Q8IWB6 1497 aa10.84□□□□□ -0.67
NPIPB4-213ENST00000541329 MLH3Q9UHC1 1453 aa10.84□□□□□ -0.67
NPIPB4-213ENST00000541329 DIP2CQ9Y2E4 1556 aa10.84□□□□□ -0.67
NPIPB4-213ENST00000541329 MROH1Q8NDA8 1641 aa10.83□□□□□ -0.68
NPIPB4-213ENST00000541329 TET3O43151 1660 aa10.82□□□□□ -0.68
NPIPB4-213ENST00000541329 L3MBTL2Q969R5 705 aa10.82□□□□□ -0.68
NPIPB4-213ENST00000541329 SPHKAPQ2M3C7 1700 aa10.81□□□□□ -0.68
NPIPB4-213ENST00000541329 KANK1Q14678 1352 aa10.81□□□□□ -0.68
NPIPB4-213ENST00000541329 RNF17Q9BXT8 1623 aaKnown RBP10.81□□□□□ -0.68
NPIPB4-213ENST00000541329 PRDM15P57071 1507 aaPredicted RBP10.8□□□□□ -0.68
NPIPB4-213ENST00000541329 BCORL1Q5H9F3 1711 aa10.79□□□□□ -0.68
NPIPB4-213ENST00000541329 VWDEQ8N2E2 1590 aa10.79□□□□□ -0.68
NPIPB4-213ENST00000541329 YEATS2Q9ULM3 1422 aa10.79□□□□□ -0.68
NPIPB4-213ENST00000541329 ZMYM4Q5VZL5 1548 aa10.79□□□□□ -0.68
NPIPB4-213ENST00000541329 CFAP65Q6ZU64 1925 aaKnown RBP10.78□□□□□ -0.68
NPIPB4-213ENST00000541329 PTPRMP28827 1452 aa10.78□□□□□ -0.68
NPIPB4-213ENST00000541329 CCDC144AA2RUR9 1427 aa10.77□□□□□ -0.68
NPIPB4-213ENST00000541329 HIRIP3Q9BW71 556 aaPredicted RBP10.77□□□□□ -0.69
NPIPB4-213ENST00000541329 PLA2R1Q13018 1463 aa10.76□□□□□ -0.69
NPIPB4-213ENST00000541329 ZNF326Q5BKZ1 582 aaKnown RBP10.76□□□□□ -0.69
NPIPB4-213ENST00000541329 GGT6Q6P531 493 aa10.76□□□□□ -0.69
NPIPB4-213ENST00000541329 ATP10AO60312 1499 aa10.75□□□□□ -0.69
NPIPB4-213ENST00000541329 EFCAB6Q5THR3 1501 aa10.75□□□□□ -0.69
NPIPB4-213ENST00000541329 NBPF8Q3BBV2 869 aa10.75□□□□□ -0.69
NPIPB4-213ENST00000541329 CLTCL1P53675 1640 aa10.75□□□□□ -0.69
NPIPB4-213ENST00000541329 CAMSAP1Q5T5Y3 1602 aa10.75□□□□□ -0.69
NPIPB4-213ENST00000541329 KDM2AQ9Y2K7 1162 aa10.74□□□□□ -0.69
NPIPB4-213ENST00000541329 TRPM2O94759 1503 aa10.74□□□□□ -0.69
NPIPB4-213ENST00000541329 SIGLEC1Q9BZZ2 1709 aa10.73□□□□□ -0.69
NPIPB4-213ENST00000541329 KIF1BO60333 1816 aa10.73□□□□□ -0.69
NPIPB4-213ENST00000541329 RGL3Q3MIN7 710 aa10.73□□□□□ -0.69
NPIPB4-213ENST00000541329 ABCC3O15438 1527 aa10.73□□□□□ -0.69
NPIPB4-213ENST00000541329 ZC3H13Q5T200 1668 aaKnown RBP10.73□□□□□ -0.69
NPIPB4-213ENST00000541329 DCAF11Q8TEB1 546 aa10.72□□□□□ -0.69
NPIPB4-213ENST00000541329 LMTK2Q8IWU2 1503 aa10.72□□□□□ -0.69
NPIPB4-213ENST00000541329 MIER1Q8N108 512 aa10.71□□□□□ -0.69
NPIPB4-213ENST00000541329 ARHGEF40Q8TER5 1519 aa10.71□□□□□ -0.69
NPIPB4-213ENST00000541329 UGGT1Q9NYU2 1555 aa10.71□□□□□ -0.69
NPIPB4-213ENST00000541329 WASHC2CQ9Y4E1 1318 aa10.71□□□□□ -0.69
NPIPB4-213ENST00000541329 MROH2AA6NES4 1674 aa10.7□□□□□ -0.7
NPIPB4-213ENST00000541329 PIAS4Q8N2W9 510 aaPredicted RBP10.7□□□□□ -0.7
NPIPB4-213ENST00000541329 CLTCQ00610 1675 aaKnown RBP10.69□□□□□ -0.7
NPIPB4-213ENST00000541329 PTPRTO14522 1441 aa10.69□□□□□ -0.7
NPIPB4-213ENST00000541329 HSPA5P11021 654 aaKnown RBP10.69□□□□□ -0.7
NPIPB4-213ENST00000541329 TRPM1Q7Z4N2 1603 aa10.69□□□□□ -0.7
NPIPB4-213ENST00000541329 REREQ9P2R6 1566 aa10.69□□□□□ -0.7
NPIPB4-213ENST00000541329 HSPA2P54652 639 aa10.68□□□□□ -0.7
NPIPB4-213ENST00000541329 ADAMTSL3P82987 1691 aa10.67□□□□□ -0.7
NPIPB4-213ENST00000541329 EIF4G2P78344 907 aaKnown RBP eCLIP10.67□□□□□ -0.7
NPIPB4-213ENST00000541329 MLECQ14165 292 aa10.67□□□□□ -0.7
NPIPB4-213ENST00000541329 NPATQ14207 1427 aa10.67□□□□□ -0.7
NPIPB4-213ENST00000541329 UHRF1BP1Q6BDS2 1440 aa10.67□□□□□ -0.7
NPIPB4-213ENST00000541329 PREX1Q8TCU6 1659 aa10.66□□□□□ -0.7
NPIPB4-213ENST00000541329 POLR1AO95602 1720 aaPredicted RBP10.66□□□□□ -0.7
NPIPB4-213ENST00000541329 IFT172Q9UG01 1749 aa10.66□□□□□ -0.7
NPIPB4-213ENST00000541329 RALGAPBQ86X10 1494 aa10.66□□□□□ -0.7
NPIPB4-213ENST00000541329 SPATA31E1Q6ZUB1 1445 aa10.66□□□□□ -0.7
NPIPB4-213ENST00000541329 AGLP35573 1532 aa10.65□□□□□ -0.7
NPIPB4-213ENST00000541329 CHGAP10645 457 aaKnown RBP10.65□□□□□ -0.7
NPIPB4-213ENST00000541329 SYNMO15061 1565 aa10.65□□□□□ -0.71
NPIPB4-213ENST00000541329 MYO5BQ9ULV0 1848 aa10.64□□□□□ -0.71
NPIPB4-213ENST00000541329 DDX10Q13206 875 aaKnown RBP10.64□□□□□ -0.71
NPIPB4-213ENST00000541329 YTHDC1Q96MU7 727 aaKnown RBP10.64□□□□□ -0.71
NPIPB4-213ENST00000541329 MADDQ8WXG6 1647 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms