RNA–Protein interactions for RNA: ENST00000541064.5

NPC2-203, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2 BASIC

Gene NPC2, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-203ENST00000541064 PTPN23Q9H3S7 1636 aa13.38□□□□□ -0.27
NPC2-203ENST00000541064 MYO5CQ9NQX4 1742 aa13.37□□□□□ -0.27
NPC2-203ENST00000541064 ITSN2Q9NZM3 1697 aa13.36□□□□□ -0.27
NPC2-203ENST00000541064 CCER1Q8TC90 406 aaPredicted RBP13.36□□□□□ -0.27
NPC2-203ENST00000541064 SCAPERQ9BY12 1400 aa13.35□□□□□ -0.27
NPC2-203ENST00000541064 PHF12Q96QT6 1004 aa13.35□□□□□ -0.27
NPC2-203ENST00000541064 ADGRL1O94910 1474 aa13.35□□□□□ -0.27
NPC2-203ENST00000541064 FAM50AQ14320 339 aaKnown RBP13.33□□□□□ -0.28
NPC2-203ENST00000541064 TSPYL2Q9H2G4 693 aaPredicted RBP13.33□□□□□ -0.28
NPC2-203ENST00000541064 ARHGAP5Q13017 1502 aa13.33□□□□□ -0.28
NPC2-203ENST00000541064 CLSPNQ9HAW4 1339 aa13.33□□□□□ -0.28
NPC2-203ENST00000541064 MAGI2Q86UL8 1455 aa13.33□□□□□ -0.28
NPC2-203ENST00000541064 POTEIP0CG38 1075 aa13.31□□□□□ -0.28
NPC2-203ENST00000541064 RICTORQ6R327 1708 aa13.31□□□□□ -0.28
NPC2-203ENST00000541064 SETD5Q9C0A6 1442 aa13.31□□□□□ -0.28
NPC2-203ENST00000541064 GALR2O43603 387 aaPredicted RBP13.3□□□□□ -0.28
NPC2-203ENST00000541064 CFDP1Q9UEE9 299 aaPredicted RBP13.3□□□□□ -0.28
NPC2-203ENST00000541064 ZBTB47Q9UFB7 747 aaPredicted RBP13.3□□□□□ -0.28
NPC2-203ENST00000541064 POGZQ7Z3K3 1410 aa13.3□□□□□ -0.28
NPC2-203ENST00000541064 FBXO3Q9UK99 471 aa13.3□□□□□ -0.28
NPC2-203ENST00000541064 FRMPD1Q5SYB0 1578 aa13.29□□□□□ -0.28
NPC2-203ENST00000541064 PREX2Q70Z35 1606 aa13.29□□□□□ -0.28
NPC2-203ENST00000541064 CDC42BPBQ9Y5S2 1711 aa13.29□□□□□ -0.28
NPC2-203ENST00000541064 ZMYM4Q5VZL5 1548 aa13.29□□□□□ -0.28
NPC2-203ENST00000541064 GPATCH8Q9UKJ3 1502 aaKnown RBP13.29□□□□□ -0.28
NPC2-203ENST00000541064 ZNF518AQ6AHZ1 1483 aa13.28□□□□□ -0.28
NPC2-203ENST00000541064 HFM1A2PYH4 1435 aa13.27□□□□□ -0.28
NPC2-203ENST00000541064 AFAP1Q8N556 730 aa13.27□□□□□ -0.29
NPC2-203ENST00000541064 ZNF777Q9ULD5 760 aaPredicted RBP13.27□□□□□ -0.29
NPC2-203ENST00000541064 ARID4BQ4LE39 1312 aaPredicted RBP13.27□□□□□ -0.29
NPC2-203ENST00000541064 DNMT1P26358 1616 aaKnown RBP13.26□□□□□ -0.29
NPC2-203ENST00000541064 CDC42BPAQ5VT25 1732 aa13.26□□□□□ -0.29
NPC2-203ENST00000541064 ACIN1Q9UKV3 1341 aaKnown RBP13.26□□□□□ -0.29
NPC2-203ENST00000541064 RAB3GAP2Q9H2M9 1393 aa13.26□□□□□ -0.29
NPC2-203ENST00000541064 PLEKHH2Q8IVE3 1493 aa13.26□□□□□ -0.29
NPC2-203ENST00000541064 MYT1LQ9UL68 1186 aa13.25□□□□□ -0.29
NPC2-203ENST00000541064 ZFYVE16Q7Z3T8 1539 aa13.25□□□□□ -0.29
NPC2-203ENST00000541064 ITGAEP38570 1179 aa13.24□□□□□ -0.29
NPC2-203ENST00000541064 ROCK1Q13464 1354 aa13.24□□□□□ -0.29
NPC2-203ENST00000541064 DHX57Q6P158 1386 aaKnown RBP13.24□□□□□ -0.29
NPC2-203ENST00000541064 KIAA1107Q9UPP5 1409 aa13.24□□□□□ -0.29
NPC2-203ENST00000541064 ARHGEF40Q8TER5 1519 aa13.24□□□□□ -0.29
NPC2-203ENST00000541064 ATP10AO60312 1499 aa13.23□□□□□ -0.29
NPC2-203ENST00000541064 PTPRKQ15262 1439 aa13.23□□□□□ -0.29
NPC2-203ENST00000541064 LHX8Q68G74 356 aa13.23□□□□□ -0.29
NPC2-203ENST00000541064 GCC2Q8IWJ2 1684 aa13.23□□□□□ -0.29
NPC2-203ENST00000541064 FBXO41Q8TF61 875 aa13.23□□□□□ -0.29
NPC2-203ENST00000541064 ABCC1P33527 1531 aa13.23□□□□□ -0.29
NPC2-203ENST00000541064 CAMSAP2Q08AD1 1489 aa13.23□□□□□ -0.29
NPC2-203ENST00000541064 MLH3Q9UHC1 1453 aa13.23□□□□□ -0.29
NPC2-203ENST00000541064 YEATS2Q9ULM3 1422 aa13.23□□□□□ -0.29
NPC2-203ENST00000541064 HNRNPMP52272 730 aaKnown RBP eCLIP13.22□□□□□ -0.29
NPC2-203ENST00000541064 KDM5CP41229 1560 aa13.22□□□□□ -0.29
NPC2-203ENST00000541064 DAPK1P53355 1430 aa13.22□□□□□ -0.29
NPC2-203ENST00000541064 TRAPPC8Q9Y2L5 1435 aa13.22□□□□□ -0.29
NPC2-203ENST00000541064 RSPH4AQ5TD94 716 aa13.22□□□□□ -0.29
NPC2-203ENST00000541064 ARHGEF12Q9NZN5 1544 aa13.21□□□□□ -0.29
NPC2-203ENST00000541064 NAIPQ13075 1403 aa13.21□□□□□ -0.29
NPC2-203ENST00000541064 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.3
NPC2-203ENST00000541064 CROCC2H7BZ55 1655 aa13.2□□□□□ -0.3
NPC2-203ENST00000541064 SPAG9O60271 1321 aaKnown RBP13.2□□□□□ -0.3
NPC2-203ENST00000541064 RASEFQ8IZ41 740 aa13.2□□□□□ -0.3
NPC2-203ENST00000541064 SHANK2Q9UPX8 1470 aa13.19□□□□□ -0.3
NPC2-203ENST00000541064 ABCC5O15440 1437 aa13.19□□□□□ -0.3
NPC2-203ENST00000541064 ARHGEF5Q12774 1597 aa13.19□□□□□ -0.3
NPC2-203ENST00000541064 SAMD9LQ8IVG5 1584 aa13.19□□□□□ -0.3
NPC2-203ENST00000541064 ADGBQ8N7X0 1667 aa13.19□□□□□ -0.3
NPC2-203ENST00000541064 C9orf84Q5VXU9 1444 aa13.19□□□□□ -0.3
NPC2-203ENST00000541064 HECW2Q9P2P5 1572 aa13.18□□□□□ -0.3
NPC2-203ENST00000541064 MS4A3Q96HJ5 214 aa13.18□□□□□ -0.3
NPC2-203ENST00000541064 ADGRL2O95490 1459 aa13.18□□□□□ -0.3
NPC2-203ENST00000541064 ZNF644Q9H582 1327 aaPredicted RBP13.17□□□□□ -0.3
NPC2-203ENST00000541064 SYCP2Q9BX26 1530 aa13.17□□□□□ -0.3
NPC2-203ENST00000541064 BCORL1Q5H9F3 1711 aa13.16□□□□□ -0.3
NPC2-203ENST00000541064 ADAMTSL3P82987 1691 aa13.16□□□□□ -0.3
NPC2-203ENST00000541064 KIF12Q96FN5 646 aa13.14□□□□□ -0.31
NPC2-203ENST00000541064 MBD5Q9P267 1494 aa13.14□□□□□ -0.31
NPC2-203ENST00000541064 REREQ9P2R6 1566 aa13.14□□□□□ -0.31
NPC2-203ENST00000541064 TSPY4P0CV99 314 aa13.13□□□□□ -0.31
NPC2-203ENST00000541064 TSPY10P0CW01 314 aa13.13□□□□□ -0.31
NPC2-203ENST00000541064 MLECQ14165 292 aa13.13□□□□□ -0.31
NPC2-203ENST00000541064 RTEL1-TNFRSF6BF6WH68 1400 aa13.13□□□□□ -0.31
NPC2-203ENST00000541064 NUBP1P53384 320 aa13.13□□□□□ -0.31
NPC2-203ENST00000541064 PTPRMP28827 1452 aa13.12□□□□□ -0.31
NPC2-203ENST00000541064 DIP2CQ9Y2E4 1556 aa13.12□□□□□ -0.31
NPC2-203ENST00000541064 AGLP35573 1532 aa13.12□□□□□ -0.31
NPC2-203ENST00000541064 KIDINS220Q9ULH0 1771 aa13.12□□□□□ -0.31
NPC2-203ENST00000541064 MAST1Q9Y2H9 1570 aa13.11□□□□□ -0.31
NPC2-203ENST00000541064 CCDC141Q6ZP82 1450 aa13.11□□□□□ -0.31
NPC2-203ENST00000541064 NCOA1Q15788 1441 aa13.11□□□□□ -0.31
NPC2-203ENST00000541064 ANKRD30AQ9BXX3 1397 aa13.1□□□□□ -0.31
NPC2-203ENST00000541064 ABCA6Q8N139 1617 aa13.1□□□□□ -0.31
NPC2-203ENST00000541064 ESF1Q9H501 851 aaKnown RBP13.1□□□□□ -0.31
NPC2-203ENST00000541064 ATP7AQ04656 1500 aa13.1□□□□□ -0.31
NPC2-203ENST00000541064 PLCB2Q00722 1185 aa13.09□□□□□ -0.31
NPC2-203ENST00000541064 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
NPC2-203ENST00000541064 MADDQ8WXG6 1647 aa13.09□□□□□ -0.31
NPC2-203ENST00000541064 SIGLEC1Q9BZZ2 1709 aa13.07□□□□□ -0.32
NPC2-203ENST00000541064 MAP3K13O43283 966 aa13.07□□□□□ -0.32
NPC2-203ENST00000541064 A2MP01023 1474 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms