RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 MYT1LQ9UL68 1186 aa13.79□□□□□ -0.2
PAAF1-209ENST00000540659 MLH3Q9UHC1 1453 aa13.79□□□□□ -0.2
PAAF1-209ENST00000540659 UNC13BO14795 1591 aa13.79□□□□□ -0.2
PAAF1-209ENST00000540659 SPAG9O60271 1321 aaKnown RBP13.78□□□□□ -0.2
PAAF1-209ENST00000540659 NUP155O75694 1391 aa13.78□□□□□ -0.2
PAAF1-209ENST00000540659 KDM5DQ9BY66 1539 aa13.78□□□□□ -0.2
PAAF1-209ENST00000540659 ADAMTSL3P82987 1691 aa13.77□□□□□ -0.21
PAAF1-209ENST00000540659 ATP7AQ04656 1500 aa13.77□□□□□ -0.21
PAAF1-209ENST00000540659 REREQ9P2R6 1566 aa13.76□□□□□ -0.21
PAAF1-209ENST00000540659 ATP10AO60312 1499 aa13.76□□□□□ -0.21
PAAF1-209ENST00000540659 TIMELESSQ9UNS1 1208 aa13.75□□□□□ -0.21
PAAF1-209ENST00000540659 MADDQ8WXG6 1647 aa13.75□□□□□ -0.21
PAAF1-209ENST00000540659 RTEL1-TNFRSF6BF6WH68 1400 aa13.74□□□□□ -0.21
PAAF1-209ENST00000540659 ERBINQ96RT1 1412 aa13.74□□□□□ -0.21
PAAF1-209ENST00000540659 PKD2Q13563 968 aa13.74□□□□□ -0.21
PAAF1-209ENST00000540659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.74□□□□□ -0.21
PAAF1-209ENST00000540659 FAM135AQ9P2D6 1515 aa13.74□□□□□ -0.21
PAAF1-209ENST00000540659 ANKRD30BQ9BXX2 1392 aa13.73□□□□□ -0.21
PAAF1-209ENST00000540659 IQGAP3Q86VI3 1631 aa13.73□□□□□ -0.21
PAAF1-209ENST00000540659 AEBP2Q6ZN18 517 aaPredicted RBP13.73□□□□□ -0.21
PAAF1-209ENST00000540659 ARID4BQ4LE39 1312 aaPredicted RBP13.72□□□□□ -0.21
PAAF1-209ENST00000540659 PPP1R15AO75807 674 aaPredicted RBP13.72□□□□□ -0.21
PAAF1-209ENST00000540659 FER1L4A9Z1Z3 1794 aa13.72□□□□□ -0.21
PAAF1-209ENST00000540659 RIMS1Q86UR5 1692 aaKnown RBP13.72□□□□□ -0.21
PAAF1-209ENST00000540659 RPRD2Q5VT52 1461 aaKnown RBP13.7□□□□□ -0.22
PAAF1-209ENST00000540659 DIEXFQ68CQ4 756 aaKnown RBP13.7□□□□□ -0.22
PAAF1-209ENST00000540659 AGLP35573 1532 aa13.69□□□□□ -0.22
PAAF1-209ENST00000540659 EIF2AK4Q9P2K8 1649 aaKnown RBP13.68□□□□□ -0.22
PAAF1-209ENST00000540659 DEPDC5O75140 1603 aa13.68□□□□□ -0.22
PAAF1-209ENST00000540659 A2MP01023 1474 aa13.67□□□□□ -0.22
PAAF1-209ENST00000540659 PTPRMP28827 1452 aa13.66□□□□□ -0.22
PAAF1-209ENST00000540659 E9PCH4 1651 aa13.64□□□□□ -0.23
PAAF1-209ENST00000540659 MLECQ14165 292 aa13.64□□□□□ -0.23
PAAF1-209ENST00000540659 L3MBTL2Q969R5 705 aa13.64□□□□□ -0.23
PAAF1-209ENST00000540659 DHX29Q7Z478 1369 aaKnown RBP13.63□□□□□ -0.23
PAAF1-209ENST00000540659 CEP152O94986 1710 aa13.63□□□□□ -0.23
PAAF1-209ENST00000540659 KIF3BO15066 747 aa13.62□□□□□ -0.23
PAAF1-209ENST00000540659 MROH1Q8NDA8 1641 aa13.61□□□□□ -0.23
PAAF1-209ENST00000540659 TET3O43151 1660 aa13.61□□□□□ -0.23
PAAF1-209ENST00000540659 HIRIP3Q9BW71 556 aaPredicted RBP13.61□□□□□ -0.23
PAAF1-209ENST00000540659 KANK1Q14678 1352 aa13.6□□□□□ -0.23
PAAF1-209ENST00000540659 SPHKAPQ2M3C7 1700 aa13.6□□□□□ -0.23
PAAF1-209ENST00000540659 PRDM15P57071 1507 aaPredicted RBP13.59□□□□□ -0.23
PAAF1-209ENST00000540659 RNF17Q9BXT8 1623 aaKnown RBP13.59□□□□□ -0.23
PAAF1-209ENST00000540659 MROH2AA6NES4 1674 aa13.58□□□□□ -0.24
PAAF1-209ENST00000540659 C3P01024 1663 aa13.58□□□□□ -0.24
PAAF1-209ENST00000540659 VWDEQ8N2E2 1590 aa13.58□□□□□ -0.24
PAAF1-209ENST00000540659 CCDC144AA2RUR9 1427 aa13.57□□□□□ -0.24
PAAF1-209ENST00000540659 CLTCQ00610 1675 aaKnown RBP13.57□□□□□ -0.24
PAAF1-209ENST00000540659 NBPF8Q3BBV2 869 aa13.56□□□□□ -0.24
PAAF1-209ENST00000540659 ZNF326Q5BKZ1 582 aaKnown RBP13.56□□□□□ -0.24
PAAF1-209ENST00000540659 PLA2R1Q13018 1463 aa13.55□□□□□ -0.24
PAAF1-209ENST00000540659 CNTLNQ9NXG0 1405 aa13.55□□□□□ -0.24
PAAF1-209ENST00000540659 CLTCL1P53675 1640 aa13.53□□□□□ -0.24
PAAF1-209ENST00000540659 GGT6Q6P531 493 aa13.53□□□□□ -0.24
PAAF1-209ENST00000540659 KDM2AQ9Y2K7 1162 aa13.53□□□□□ -0.24
PAAF1-209ENST00000540659 PLPPR3Q6T4P5 718 aa13.52□□□□□ -0.25
PAAF1-209ENST00000540659 TRPM2O94759 1503 aa13.52□□□□□ -0.25
PAAF1-209ENST00000540659 EFCAB6Q5THR3 1501 aa13.52□□□□□ -0.25
PAAF1-209ENST00000540659 PREX1Q8TCU6 1659 aa13.52□□□□□ -0.25
PAAF1-209ENST00000540659 CAMSAP1Q5T5Y3 1602 aa13.51□□□□□ -0.25
PAAF1-209ENST00000540659 HSPA5P11021 654 aaKnown RBP13.51□□□□□ -0.25
PAAF1-209ENST00000540659 RGL3Q3MIN7 710 aa13.51□□□□□ -0.25
PAAF1-209ENST00000540659 DCAF11Q8TEB1 546 aa13.51□□□□□ -0.25
PAAF1-209ENST00000540659 ZC3H13Q5T200 1668 aaKnown RBP13.5□□□□□ -0.25
PAAF1-209ENST00000540659 LMTK3Q96Q04 1460 aa13.5□□□□□ -0.25
PAAF1-209ENST00000540659 CFAP65Q6ZU64 1925 aaKnown RBP13.5□□□□□ -0.25
PAAF1-209ENST00000540659 LMTK2Q8IWU2 1503 aa13.49□□□□□ -0.25
PAAF1-209ENST00000540659 KIF1BO60333 1816 aa13.49□□□□□ -0.25
PAAF1-209ENST00000540659 CEBPAP49715 358 aaPredicted RBP13.49□□□□□ -0.25
PAAF1-209ENST00000540659 ESF1Q9H501 851 aaKnown RBP13.49□□□□□ -0.25
PAAF1-209ENST00000540659 EIF4G2P78344 907 aaKnown RBP eCLIP13.48□□□□□ -0.25
PAAF1-209ENST00000540659 MIER1Q8N108 512 aa13.48□□□□□ -0.25
PAAF1-209ENST00000540659 ABCC3O15438 1527 aa13.48□□□□□ -0.25
PAAF1-209ENST00000540659 TRPM1Q7Z4N2 1603 aa13.47□□□□□ -0.25
PAAF1-209ENST00000540659 UGGT1Q9NYU2 1555 aa13.47□□□□□ -0.25
PAAF1-209ENST00000540659 PPP6R1Q9UPN7 881 aa13.47□□□□□ -0.25
PAAF1-209ENST00000540659 SETD1BQ9UPS6 1966 aaKnown RBP13.47□□□□□ -0.25
PAAF1-209ENST00000540659 PTPRTO14522 1441 aa13.47□□□□□ -0.25
PAAF1-209ENST00000540659 UHRF1BP1Q6BDS2 1440 aa13.47□□□□□ -0.25
PAAF1-209ENST00000540659 DDX10Q13206 875 aaKnown RBP13.46□□□□□ -0.25
PAAF1-209ENST00000540659 ZMYM3Q14202 1370 aa13.45□□□□□ -0.26
PAAF1-209ENST00000540659 WASHC2CQ9Y4E1 1318 aa13.45□□□□□ -0.26
PAAF1-209ENST00000540659 POLR1AO95602 1720 aaPredicted RBP13.45□□□□□ -0.26
PAAF1-209ENST00000540659 RALGAPBQ86X10 1494 aa13.45□□□□□ -0.26
PAAF1-209ENST00000540659 MYO3AQ8NEV4 1616 aa13.45□□□□□ -0.26
PAAF1-209ENST00000540659 NPATQ14207 1427 aa13.44□□□□□ -0.26
PAAF1-209ENST00000540659 ZNF142P52746 1687 aaPredicted RBP13.44□□□□□ -0.26
PAAF1-209ENST00000540659 PRAG1Q86YV5 1406 aa13.42□□□□□ -0.26
PAAF1-209ENST00000540659 SPATA31E1Q6ZUB1 1445 aa13.41□□□□□ -0.26
PAAF1-209ENST00000540659 IFT172Q9UG01 1749 aa13.41□□□□□ -0.26
PAAF1-209ENST00000540659 CARD11Q9BXL7 1154 aa13.4□□□□□ -0.26
PAAF1-209ENST00000540659 ROCK2O75116 1388 aaKnown RBP13.4□□□□□ -0.26
PAAF1-209ENST00000540659 USP47Q96K76 1375 aa13.4□□□□□ -0.26
PAAF1-209ENST00000540659 CHGAP10645 457 aaKnown RBP13.39□□□□□ -0.27
PAAF1-209ENST00000540659 CEP170BQ9Y4F5 1589 aaPredicted RBP13.39□□□□□ -0.27
PAAF1-209ENST00000540659 SYNMO15061 1565 aa13.38□□□□□ -0.27
PAAF1-209ENST00000540659 SPATA31D1Q6ZQQ2 1576 aa13.38□□□□□ -0.27
PAAF1-209ENST00000540659 STAC3Q96MF2 364 aa13.38□□□□□ -0.27
PAAF1-209ENST00000540659 ERVK-7P63135 1459 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms