RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 SYCP2Q9BX26 1530 aa17.28■□□□□ 0.36
SSPN-207ENST00000540266 GPATCH8Q9UKJ3 1502 aaKnown RBP17.27■□□□□ 0.36
SSPN-207ENST00000540266 MIA2Q96PC5 1412 aa17.27■□□□□ 0.35
SSPN-207ENST00000540266 SRCAPQ6ZRS2 3230 aa17.26■□□□□ 0.35
SSPN-207ENST00000540266 POLR1AO95602 1720 aaPredicted RBP17.26■□□□□ 0.35
SSPN-207ENST00000540266 PZPP20742 1482 aa17.25■□□□□ 0.35
SSPN-207ENST00000540266 INO80Q9ULG1 1556 aaPredicted RBP17.25■□□□□ 0.35
SSPN-207ENST00000540266 FAM135BQ49AJ0 1406 aa17.25■□□□□ 0.35
SSPN-207ENST00000540266 DEPDC5O75140 1603 aa17.25■□□□□ 0.35
SSPN-207ENST00000540266 RNF17Q9BXT8 1623 aaKnown RBP17.23■□□□□ 0.35
SSPN-207ENST00000540266 UBTFP17480 764 aaKnown RBP17.23■□□□□ 0.35
SSPN-207ENST00000540266 DHX29Q7Z478 1369 aaKnown RBP17.23■□□□□ 0.35
SSPN-207ENST00000540266 NLRP1Q9C000 1473 aa17.23■□□□□ 0.35
SSPN-207ENST00000540266 LRRIQ1Q96JM4 1722 aa17.22■□□□□ 0.35
SSPN-207ENST00000540266 UPF1Q92900 1129 aaKnown RBP eCLIP17.22■□□□□ 0.35
SSPN-207ENST00000540266 CDC42BPAQ5VT25 1732 aa17.21■□□□□ 0.35
SSPN-207ENST00000540266 STRCP1A6NGW2 1772 aa17.21■□□□□ 0.35
SSPN-207ENST00000540266 PLEKHH2Q8IVE3 1493 aa17.21■□□□□ 0.35
SSPN-207ENST00000540266 CFDP1Q9UEE9 299 aaPredicted RBP17.21■□□□□ 0.35
SSPN-207ENST00000540266 FAM135AQ9P2D6 1515 aa17.21■□□□□ 0.34
SSPN-207ENST00000540266 CASKIN1Q8WXD9 1431 aa17.21■□□□□ 0.34
SSPN-207ENST00000540266 UGGT1Q9NYU2 1555 aa17.2■□□□□ 0.34
SSPN-207ENST00000540266 CCDC18Q5T9S5 1454 aa17.2■□□□□ 0.34
SSPN-207ENST00000540266 KIF3BO15066 747 aa17.18■□□□□ 0.34
SSPN-207ENST00000540266 WASHC2CQ9Y4E1 1318 aa17.18■□□□□ 0.34
SSPN-207ENST00000540266 RTEL1-TNFRSF6BF6WH68 1400 aa17.17■□□□□ 0.34
SSPN-207ENST00000540266 SYNMO15061 1565 aa17.17■□□□□ 0.34
SSPN-207ENST00000540266 MBD5Q9P267 1494 aa17.16■□□□□ 0.34
SSPN-207ENST00000540266 IQGAP1P46940 1657 aa17.16■□□□□ 0.34
SSPN-207ENST00000540266 ZNF644Q9H582 1327 aaPredicted RBP17.15■□□□□ 0.34
SSPN-207ENST00000540266 KDM5DQ9BY66 1539 aa17.13■□□□□ 0.33
SSPN-207ENST00000540266 LTKP29376 864 aa17.12■□□□□ 0.33
SSPN-207ENST00000540266 ADGBQ8N7X0 1667 aa17.12■□□□□ 0.33
SSPN-207ENST00000540266 CCNB3Q8WWL7 1395 aa17.1■□□□□ 0.33
SSPN-207ENST00000540266 KCNA4P22459 653 aa17.09■□□□□ 0.33
SSPN-207ENST00000540266 SETD1AO15047 1707 aaKnown RBP17.09■□□□□ 0.33
SSPN-207ENST00000540266 ZC3H13Q5T200 1668 aaKnown RBP17.07■□□□□ 0.32
SSPN-207ENST00000540266 SCAF11Q99590 1463 aaKnown RBP17.06■□□□□ 0.32
SSPN-207ENST00000540266 TMEM94Q12767 1356 aa17.06■□□□□ 0.32
SSPN-207ENST00000540266 TXNDC2Q86VQ3 553 aa17.06■□□□□ 0.32
SSPN-207ENST00000540266 JCADQ9P266 1359 aa17.04■□□□□ 0.32
SSPN-207ENST00000540266 NCOA2Q15596 1464 aa17.04■□□□□ 0.32
SSPN-207ENST00000540266 ARHGAP23Q9P227 1491 aa17.04■□□□□ 0.32
SSPN-207ENST00000540266 FYCO1Q9BQS8 1478 aa17.03■□□□□ 0.32
SSPN-207ENST00000540266 ZNF772Q68DY9 489 aaPredicted RBP17.02■□□□□ 0.32
SSPN-207ENST00000540266 TRIM52Q96A61 297 aa17.02■□□□□ 0.32
SSPN-207ENST00000540266 XIRP1Q702N8 1843 aaKnown RBP17.02■□□□□ 0.31
SSPN-207ENST00000540266 KCNA6P17658 529 aa17.01■□□□□ 0.31
SSPN-207ENST00000540266 ERVK-7P63135 1459 aa17■□□□□ 0.31
SSPN-207ENST00000540266 SLAIN2Q9P270 581 aa17■□□□□ 0.31
SSPN-207ENST00000540266 SLIT1O75093 1534 aa17■□□□□ 0.31
SSPN-207ENST00000540266 RSPH4AQ5TD94 716 aa16.99■□□□□ 0.31
SSPN-207ENST00000540266 ROBO1Q9Y6N7 1651 aa16.99■□□□□ 0.31
SSPN-207ENST00000540266 PROSER2Q86WR7 435 aaPredicted RBP16.98■□□□□ 0.31
SSPN-207ENST00000540266 RBM33Q96EV2 1170 aaKnown RBP16.98■□□□□ 0.31
SSPN-207ENST00000540266 MAP3K1Q13233 1512 aa16.97■□□□□ 0.31
SSPN-207ENST00000540266 RXRBP28702 533 aa16.97■□□□□ 0.31
SSPN-207ENST00000540266 EID1Q9Y6B2 187 aa16.97■□□□□ 0.31
SSPN-207ENST00000540266 SPATA31A6Q5VVP1 1343 aa16.96■□□□□ 0.31
SSPN-207ENST00000540266 ABCC3O15438 1527 aa16.96■□□□□ 0.31
SSPN-207ENST00000540266 LRP6O75581 1613 aa16.96■□□□□ 0.31
SSPN-207ENST00000540266 LRRC9Q6ZRR7 1453 aa16.96■□□□□ 0.31
SSPN-207ENST00000540266 CCDC141Q6ZP82 1450 aa16.93■□□□□ 0.3
SSPN-207ENST00000540266 CDK12Q9NYV4 1490 aaPredicted RBP16.93■□□□□ 0.3
SSPN-207ENST00000540266 MTUS2Q5JR59 1369 aa16.93■□□□□ 0.3
SSPN-207ENST00000540266 TMEM2Q9UHN6 1383 aa16.93■□□□□ 0.3
SSPN-207ENST00000540266 UBR1Q8IWV7 1749 aa16.93■□□□□ 0.3
SSPN-207ENST00000540266 PRDM15P57071 1507 aaPredicted RBP16.91■□□□□ 0.3
SSPN-207ENST00000540266 TIAM1Q13009 1591 aa16.91■□□□□ 0.3
SSPN-207ENST00000540266 FGD6Q6ZV73 1430 aa16.91■□□□□ 0.3
SSPN-207ENST00000540266 MEX3CQ5U5Q3 659 aaKnown RBP16.9■□□□□ 0.3
SSPN-207ENST00000540266 SLC26A8Q96RN1 970 aa16.9■□□□□ 0.3
SSPN-207ENST00000540266 MSH6P52701 1360 aa16.89■□□□□ 0.3
SSPN-207ENST00000540266 TSPY4P0CV99 314 aa16.88■□□□□ 0.29
SSPN-207ENST00000540266 TSPY10P0CW01 314 aa16.88■□□□□ 0.29
SSPN-207ENST00000540266 TET3O43151 1660 aa16.88■□□□□ 0.29
SSPN-207ENST00000540266 CEP162Q5TB80 1403 aa16.87■□□□□ 0.29
SSPN-207ENST00000540266 CAMSAP2Q08AD1 1489 aa16.87■□□□□ 0.29
SSPN-207ENST00000540266 COL16A1Q07092 1604 aaPredicted RBP16.87■□□□□ 0.29
SSPN-207ENST00000540266 ARHGAP31Q2M1Z3 1444 aa16.87■□□□□ 0.29
SSPN-207ENST00000540266 NKTRP30414 1462 aaKnown RBP16.86■□□□□ 0.29
SSPN-207ENST00000540266 PHLPP1O60346 1717 aa16.85■□□□□ 0.29
SSPN-207ENST00000540266 MROH1Q8NDA8 1641 aa16.82■□□□□ 0.28
SSPN-207ENST00000540266 IDI1Q13907 227 aa16.82■□□□□ 0.28
SSPN-207ENST00000540266 NWD1Q149M9 1564 aa16.81■□□□□ 0.28
SSPN-207ENST00000540266 AFF2P51816 1311 aa16.8■□□□□ 0.28
SSPN-207ENST00000540266 ADRA2BP18089 450 aa16.79■□□□□ 0.28
SSPN-207ENST00000540266 ARHGEF5Q12774 1597 aa16.79■□□□□ 0.28
SSPN-207ENST00000540266 RGS12O14924 1447 aa16.79■□□□□ 0.28
SSPN-207ENST00000540266 NCOA3Q9Y6Q9 1424 aa16.79■□□□□ 0.28
SSPN-207ENST00000540266 RBM6P78332 1123 aaKnown RBP16.78■□□□□ 0.28
SSPN-207ENST00000540266 QTRT2Q9H974 415 aaKnown RBP16.78■□□□□ 0.28
SSPN-207ENST00000540266 ZRANB1Q9UGI0 708 aa16.78■□□□□ 0.28
SSPN-207ENST00000540266 STAG3Q9UJ98 1225 aa16.78■□□□□ 0.28
SSPN-207ENST00000540266 EHBP1L1Q8N3D4 1523 aa16.77■□□□□ 0.28
SSPN-207ENST00000540266 NUTM2BA6NNL0 878 aaPredicted RBP16.76■□□□□ 0.27
SSPN-207ENST00000540266 NUTM2EB1AL46 878 aaPredicted RBP16.76■□□□□ 0.27
SSPN-207ENST00000540266 NUTM2AQ8IVF1 878 aaPredicted RBP16.76■□□□□ 0.27
SSPN-207ENST00000540266 AHDC1Q5TGY3 1603 aaPredicted RBP16.76■□□□□ 0.27
SSPN-207ENST00000540266 EFCAB6Q5THR3 1501 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms