RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 FER1L4A9Z1Z3 1794 aa20.44■□□□□ 0.86
PRPF19-204ENST00000539960 ZMYM3Q14202 1370 aa20.43■□□□□ 0.86
PRPF19-204ENST00000539960 WASHC2CQ9Y4E1 1318 aa20.42■□□□□ 0.86
PRPF19-204ENST00000539960 ROCK1Q13464 1354 aa20.41■□□□□ 0.86
PRPF19-204ENST00000539960 ERBINQ96RT1 1412 aa20.4■□□□□ 0.86
PRPF19-204ENST00000539960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.36■□□□□ 0.85
PRPF19-204ENST00000539960 ANKRD50Q9ULJ7 1429 aa20.36■□□□□ 0.85
PRPF19-204ENST00000539960 EIF2AK4Q9P2K8 1649 aaKnown RBP20.35■□□□□ 0.85
PRPF19-204ENST00000539960 RNF17Q9BXT8 1623 aaKnown RBP20.32■□□□□ 0.84
PRPF19-204ENST00000539960 FAM135AQ9P2D6 1515 aa20.32■□□□□ 0.84
PRPF19-204ENST00000539960 CLTCQ00610 1675 aaKnown RBP20.32■□□□□ 0.84
PRPF19-204ENST00000539960 C3P01024 1663 aa20.31■□□□□ 0.84
PRPF19-204ENST00000539960 KDM5DQ9BY66 1539 aa20.31■□□□□ 0.84
PRPF19-204ENST00000539960 MROH2AA6NES4 1674 aa20.3■□□□□ 0.84
PRPF19-204ENST00000539960 KANK1Q14678 1352 aa20.3■□□□□ 0.84
PRPF19-204ENST00000539960 NPATQ14207 1427 aa20.29■□□□□ 0.84
PRPF19-204ENST00000539960 FBXO31Q5XUX0 539 aaPredicted RBP20.29■□□□□ 0.84
PRPF19-204ENST00000539960 MROH1Q8NDA8 1641 aa20.28■□□□□ 0.84
PRPF19-204ENST00000539960 ABCC3O15438 1527 aa20.27■□□□□ 0.83
PRPF19-204ENST00000539960 SETD1BQ9UPS6 1966 aaKnown RBP20.26■□□□□ 0.83
PRPF19-204ENST00000539960 LMTK3Q96Q04 1460 aa20.25■□□□□ 0.83
PRPF19-204ENST00000539960 PZPP20742 1482 aa20.24■□□□□ 0.83
PRPF19-204ENST00000539960 PRDM15P57071 1507 aaPredicted RBP20.24■□□□□ 0.83
PRPF19-204ENST00000539960 HSPA2P54652 639 aa20.24■□□□□ 0.83
PRPF19-204ENST00000539960 UHRF1BP1Q6BDS2 1440 aa20.23■□□□□ 0.83
PRPF19-204ENST00000539960 DEPDC5O75140 1603 aa20.23■□□□□ 0.83
PRPF19-204ENST00000539960 NAIPQ13075 1403 aa20.22■□□□□ 0.83
PRPF19-204ENST00000539960 ARHGAP31Q2M1Z3 1444 aa20.2■□□□□ 0.82
PRPF19-204ENST00000539960 VWDEQ8N2E2 1590 aa20.2■□□□□ 0.82
PRPF19-204ENST00000539960 TNRQ92752 1358 aa20.2■□□□□ 0.82
PRPF19-204ENST00000539960 ZC3H13Q5T200 1668 aaKnown RBP20.19■□□□□ 0.82
PRPF19-204ENST00000539960 HFM1A2PYH4 1435 aa20.19■□□□□ 0.82
PRPF19-204ENST00000539960 NUP155O75694 1391 aa20.19■□□□□ 0.82
PRPF19-204ENST00000539960 LMTK2Q8IWU2 1503 aa20.18■□□□□ 0.82
PRPF19-204ENST00000539960 PREX1Q8TCU6 1659 aa20.17■□□□□ 0.82
PRPF19-204ENST00000539960 CEP152O94986 1710 aa20.16■□□□□ 0.82
PRPF19-204ENST00000539960 CAMSAP1Q5T5Y3 1602 aa20.14■□□□□ 0.81
PRPF19-204ENST00000539960 UNC13BO14795 1591 aa20.13■□□□□ 0.81
PRPF19-204ENST00000539960 ERVK-7P63135 1459 aa20.13■□□□□ 0.81
PRPF19-204ENST00000539960 TRIM52Q96A61 297 aa20.12■□□□□ 0.81
PRPF19-204ENST00000539960 SPATA31D1Q6ZQQ2 1576 aa20.11■□□□□ 0.81
PRPF19-204ENST00000539960 A2ML1A8K2U0 1454 aa20.1■□□□□ 0.81
PRPF19-204ENST00000539960 THEMISQ8N1K5 641 aaPredicted RBP20.09■□□□□ 0.81
PRPF19-204ENST00000539960 NLRP1Q9C000 1473 aa20.09■□□□□ 0.81
PRPF19-204ENST00000539960 EFCAB6Q5THR3 1501 aa20.08■□□□□ 0.81
PRPF19-204ENST00000539960 GCC2Q8IWJ2 1684 aa20.08■□□□□ 0.81
PRPF19-204ENST00000539960 RPRD2Q5VT52 1461 aaKnown RBP20.07■□□□□ 0.8
PRPF19-204ENST00000539960 MYO3AQ8NEV4 1616 aa20.07■□□□□ 0.8
PRPF19-204ENST00000539960 IDI1Q13907 227 aa20.07■□□□□ 0.8
PRPF19-204ENST00000539960 NOS1P29475 1434 aa20.07■□□□□ 0.8
PRPF19-204ENST00000539960 CFAP65Q6ZU64 1925 aaKnown RBP20.07■□□□□ 0.8
PRPF19-204ENST00000539960 SETD5Q9C0A6 1442 aa20.06■□□□□ 0.8
PRPF19-204ENST00000539960 SLC52A1Q9NWF4 448 aa20.06■□□□□ 0.8
PRPF19-204ENST00000539960 CEP170BQ9Y4F5 1589 aaPredicted RBP20.06■□□□□ 0.8
PRPF19-204ENST00000539960 IQGAP3Q86VI3 1631 aa20.05■□□□□ 0.8
PRPF19-204ENST00000539960 DMRT2Q9Y5R5 561 aa20.05■□□□□ 0.8
PRPF19-204ENST00000539960 TET3O43151 1660 aa20.05■□□□□ 0.8
PRPF19-204ENST00000539960 ACIN1Q9UKV3 1341 aaKnown RBP20.04■□□□□ 0.8
PRPF19-204ENST00000539960 SLC4A1APQ9BWU0 796 aaKnown RBP20.03■□□□□ 0.8
PRPF19-204ENST00000539960 PKD2Q13563 968 aa20.02■□□□□ 0.8
PRPF19-204ENST00000539960 ZNF142P52746 1687 aaPredicted RBP20.02■□□□□ 0.8
PRPF19-204ENST00000539960 NCKAP5LQ9HCH0 1330 aa20.02■□□□□ 0.79
PRPF19-204ENST00000539960 UGGT1Q9NYU2 1555 aa20■□□□□ 0.79
PRPF19-204ENST00000539960 ANKLE2Q86XL3 938 aa20■□□□□ 0.79
PRPF19-204ENST00000539960 STAG3Q9UJ98 1225 aa20■□□□□ 0.79
PRPF19-204ENST00000539960 PLA2R1Q13018 1463 aa19.99■□□□□ 0.79
PRPF19-204ENST00000539960 HRCP23327 699 aa19.99■□□□□ 0.79
PRPF19-204ENST00000539960 E9PCH4 1651 aa19.97■□□□□ 0.79
PRPF19-204ENST00000539960 RAB3GAP2Q9H2M9 1393 aa19.97■□□□□ 0.79
PRPF19-204ENST00000539960 SYNMO15061 1565 aa19.97■□□□□ 0.79
PRPF19-204ENST00000539960 MPHOSPH9Q99550 1183 aa19.97■□□□□ 0.79
PRPF19-204ENST00000539960 STRCQ7RTU9 1775 aa19.96■□□□□ 0.79
PRPF19-204ENST00000539960 PTPRTO14522 1441 aa19.94■□□□□ 0.78
PRPF19-204ENST00000539960 TXNDC2Q86VQ3 553 aa19.92■□□□□ 0.78
PRPF19-204ENST00000539960 PIK3C2BO00750 1634 aa19.91■□□□□ 0.78
PRPF19-204ENST00000539960 CHGAP10645 457 aaKnown RBP19.91■□□□□ 0.78
PRPF19-204ENST00000539960 LTKP29376 864 aa19.91■□□□□ 0.78
PRPF19-204ENST00000539960 FOXD1Q16676 465 aa19.91■□□□□ 0.78
PRPF19-204ENST00000539960 EID1Q9Y6B2 187 aa19.91■□□□□ 0.78
PRPF19-204ENST00000539960 TMEM2Q9UHN6 1383 aa19.91■□□□□ 0.78
PRPF19-204ENST00000539960 TRIM26Q12899 539 aaPredicted RBP19.9■□□□□ 0.78
PRPF19-204ENST00000539960 UBR1Q8IWV7 1749 aa19.9■□□□□ 0.78
PRPF19-204ENST00000539960 ARHGAP23Q9P227 1491 aa19.88■□□□□ 0.77
PRPF19-204ENST00000539960 HDGFP51858 240 aaKnown RBP19.87■□□□□ 0.77
PRPF19-204ENST00000539960 SLIT1O75093 1534 aa19.86■□□□□ 0.77
PRPF19-204ENST00000539960 KDM5AP29375 1690 aaKnown RBP19.85■□□□□ 0.77
PRPF19-204ENST00000539960 ADGRB3O60242 1522 aa19.85■□□□□ 0.77
PRPF19-204ENST00000539960 MED14O60244 1454 aa19.85■□□□□ 0.77
PRPF19-204ENST00000539960 NPHP4O75161 1426 aaPredicted RBP19.85■□□□□ 0.77
PRPF19-204ENST00000539960 SCAF11Q99590 1463 aaKnown RBP19.84■□□□□ 0.77
PRPF19-204ENST00000539960 TMEM131LA2VDJ0 1609 aa19.83■□□□□ 0.76
PRPF19-204ENST00000539960 SPHKAPQ2M3C7 1700 aa19.82■□□□□ 0.76
PRPF19-204ENST00000539960 TRPM2O94759 1503 aa19.82■□□□□ 0.76
PRPF19-204ENST00000539960 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.82■□□□□ 0.76
PRPF19-204ENST00000539960 NEURL4Q96JN8 1562 aa19.81■□□□□ 0.76
PRPF19-204ENST00000539960 RIMS2Q9UQ26 1411 aa19.8■□□□□ 0.76
PRPF19-204ENST00000539960 ZNF326Q5BKZ1 582 aaKnown RBP19.79■□□□□ 0.76
PRPF19-204ENST00000539960 ZFYVE9O95405 1425 aa19.78■□□□□ 0.76
PRPF19-204ENST00000539960 PPP1R15AO75807 674 aaPredicted RBP19.78■□□□□ 0.76
PRPF19-204ENST00000539960 NUTM2DQ5VT03 806 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms