RNA–Protein interactions for RNA: ENST00000539534.5

LMO3-221, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-221ENST00000539534 PPP6R1Q9UPN7 881 aa18.47■□□□□ 0.55
LMO3-221ENST00000539534 SENP3Q9H4L4 574 aaPredicted RBP18.46■□□□□ 0.55
LMO3-221ENST00000539534 SIGLEC1Q9BZZ2 1709 aa18.44■□□□□ 0.54
LMO3-221ENST00000539534 UNC13BO14795 1591 aa18.44■□□□□ 0.54
LMO3-221ENST00000539534 DEPDC5O75140 1603 aa18.44■□□□□ 0.54
LMO3-221ENST00000539534 ARID4BQ4LE39 1312 aaPredicted RBP18.44■□□□□ 0.54
LMO3-221ENST00000539534 KDM5DQ9BY66 1539 aa18.44■□□□□ 0.54
LMO3-221ENST00000539534 FAM135AQ9P2D6 1515 aa18.44■□□□□ 0.54
LMO3-221ENST00000539534 RNF17Q9BXT8 1623 aaKnown RBP18.42■□□□□ 0.54
LMO3-221ENST00000539534 GGT6Q6P531 493 aa18.42■□□□□ 0.54
LMO3-221ENST00000539534 CLSPNQ9HAW4 1339 aa18.39■□□□□ 0.53
LMO3-221ENST00000539534 NUP155O75694 1391 aa18.39■□□□□ 0.53
LMO3-221ENST00000539534 PRDM15P57071 1507 aaPredicted RBP18.39■□□□□ 0.53
LMO3-221ENST00000539534 MROH1Q8NDA8 1641 aa18.38■□□□□ 0.53
LMO3-221ENST00000539534 VWDEQ8N2E2 1590 aa18.38■□□□□ 0.53
LMO3-221ENST00000539534 MLECQ14165 292 aa18.37■□□□□ 0.53
LMO3-221ENST00000539534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.37■□□□□ 0.53
LMO3-221ENST00000539534 IQGAP3Q86VI3 1631 aa18.37■□□□□ 0.53
LMO3-221ENST00000539534 KANK1Q14678 1352 aa18.36■□□□□ 0.53
LMO3-221ENST00000539534 WASHC2CQ9Y4E1 1318 aa18.35■□□□□ 0.53
LMO3-221ENST00000539534 TRIM52Q96A61 297 aa18.35■□□□□ 0.53
LMO3-221ENST00000539534 LMTK2Q8IWU2 1503 aa18.34■□□□□ 0.53
LMO3-221ENST00000539534 ZC3H13Q5T200 1668 aaKnown RBP18.34■□□□□ 0.53
LMO3-221ENST00000539534 MPHOSPH9Q99550 1183 aa18.32■□□□□ 0.52
LMO3-221ENST00000539534 PZPP20742 1482 aa18.32■□□□□ 0.52
LMO3-221ENST00000539534 ABCC3O15438 1527 aa18.31■□□□□ 0.52
LMO3-221ENST00000539534 CNTLNQ9NXG0 1405 aa18.31■□□□□ 0.52
LMO3-221ENST00000539534 DHX57Q6P158 1386 aaKnown RBP18.3■□□□□ 0.52
LMO3-221ENST00000539534 SLC4A1APQ9BWU0 796 aaKnown RBP18.29■□□□□ 0.52
LMO3-221ENST00000539534 ARHGAP31Q2M1Z3 1444 aa18.29■□□□□ 0.52
LMO3-221ENST00000539534 TET3O43151 1660 aa18.28■□□□□ 0.52
LMO3-221ENST00000539534 ESF1Q9H501 851 aaKnown RBP18.28■□□□□ 0.52
LMO3-221ENST00000539534 ZMYM3Q14202 1370 aa18.28■□□□□ 0.52
LMO3-221ENST00000539534 ADAMTSL3P82987 1691 aa18.28■□□□□ 0.52
LMO3-221ENST00000539534 KDM4FA0A1W2PPD8 638 aa18.27■□□□□ 0.52
LMO3-221ENST00000539534 PKD2Q13563 968 aa18.26■□□□□ 0.51
LMO3-221ENST00000539534 RPRD2Q5VT52 1461 aaKnown RBP18.26■□□□□ 0.51
LMO3-221ENST00000539534 NPATQ14207 1427 aa18.23■□□□□ 0.51
LMO3-221ENST00000539534 EFCAB6Q5THR3 1501 aa18.23■□□□□ 0.51
LMO3-221ENST00000539534 CCER1Q8TC90 406 aaPredicted RBP18.22■□□□□ 0.51
LMO3-221ENST00000539534 PTPRTO14522 1441 aa18.2■□□□□ 0.5
LMO3-221ENST00000539534 MADDQ8WXG6 1647 aa18.2■□□□□ 0.5
LMO3-221ENST00000539534 MROH2AA6NES4 1674 aa18.19■□□□□ 0.5
LMO3-221ENST00000539534 FBXO31Q5XUX0 539 aaPredicted RBP18.19■□□□□ 0.5
LMO3-221ENST00000539534 NOS1P29475 1434 aa18.18■□□□□ 0.5
LMO3-221ENST00000539534 CEBPAP49715 358 aaPredicted RBP18.18■□□□□ 0.5
LMO3-221ENST00000539534 FOXD1Q16676 465 aa18.18■□□□□ 0.5
LMO3-221ENST00000539534 CAMSAP1Q5T5Y3 1602 aa18.18■□□□□ 0.5
LMO3-221ENST00000539534 PLA2R1Q13018 1463 aa18.18■□□□□ 0.5
LMO3-221ENST00000539534 CLTCQ00610 1675 aaKnown RBP18.18■□□□□ 0.5
LMO3-221ENST00000539534 CEP152O94986 1710 aa18.18■□□□□ 0.5
LMO3-221ENST00000539534 PTPRMP28827 1452 aa18.17■□□□□ 0.5
LMO3-221ENST00000539534 ANKRD30BQ9BXX2 1392 aa18.17■□□□□ 0.5
LMO3-221ENST00000539534 E9PCH4 1651 aa18.15■□□□□ 0.5
LMO3-221ENST00000539534 FER1L4A9Z1Z3 1794 aa18.15■□□□□ 0.5
LMO3-221ENST00000539534 ZEB1P37275 1124 aaPredicted RBP18.15■□□□□ 0.5
LMO3-221ENST00000539534 ERVK-7P63135 1459 aa18.14■□□□□ 0.49
LMO3-221ENST00000539534 SPHKAPQ2M3C7 1700 aa18.13■□□□□ 0.49
LMO3-221ENST00000539534 TIMELESSQ9UNS1 1208 aa18.13■□□□□ 0.49
LMO3-221ENST00000539534 SPATA31D1Q6ZQQ2 1576 aa18.13■□□□□ 0.49
LMO3-221ENST00000539534 SLC52A1Q9NWF4 448 aa18.12■□□□□ 0.49
LMO3-221ENST00000539534 TRPM2O94759 1503 aa18.12■□□□□ 0.49
LMO3-221ENST00000539534 RIMS1Q86UR5 1692 aaKnown RBP18.11■□□□□ 0.49
LMO3-221ENST00000539534 NEURL4Q96JN8 1562 aa18.1■□□□□ 0.49
LMO3-221ENST00000539534 C3P01024 1663 aa18.09■□□□□ 0.49
LMO3-221ENST00000539534 TNRQ92752 1358 aa18.09■□□□□ 0.49
LMO3-221ENST00000539534 IDI1Q13907 227 aa18.08■□□□□ 0.48
LMO3-221ENST00000539534 CCDC144AA2RUR9 1427 aa18.06■□□□□ 0.48
LMO3-221ENST00000539534 SYNMO15061 1565 aa18.06■□□□□ 0.48
LMO3-221ENST00000539534 PREX1Q8TCU6 1659 aa18.06■□□□□ 0.48
LMO3-221ENST00000539534 NLRP1Q9C000 1473 aa18.04■□□□□ 0.48
LMO3-221ENST00000539534 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
LMO3-221ENST00000539534 SIN3AQ96ST3 1273 aa18.02■□□□□ 0.48
LMO3-221ENST00000539534 PIK3C2BO00750 1634 aa18.01■□□□□ 0.47
LMO3-221ENST00000539534 KDM5AP29375 1690 aaKnown RBP18■□□□□ 0.47
LMO3-221ENST00000539534 UGGT1Q9NYU2 1555 aa18■□□□□ 0.47
LMO3-221ENST00000539534 SPATA31E1Q6ZUB1 1445 aa17.99■□□□□ 0.47
LMO3-221ENST00000539534 STAC3Q96MF2 364 aa17.99■□□□□ 0.47
LMO3-221ENST00000539534 KIF1BO60333 1816 aa17.99■□□□□ 0.47
LMO3-221ENST00000539534 A2ML1A8K2U0 1454 aa17.98■□□□□ 0.47
LMO3-221ENST00000539534 CLTCL1P53675 1640 aa17.98■□□□□ 0.47
LMO3-221ENST00000539534 SETD1BQ9UPS6 1966 aaKnown RBP17.97■□□□□ 0.47
LMO3-221ENST00000539534 TONSLQ96HA7 1378 aa17.96■□□□□ 0.47
LMO3-221ENST00000539534 THEMISQ8N1K5 641 aaPredicted RBP17.95■□□□□ 0.46
LMO3-221ENST00000539534 UHRF1BP1Q6BDS2 1440 aa17.95■□□□□ 0.46
LMO3-221ENST00000539534 CFAP65Q6ZU64 1925 aaKnown RBP17.94■□□□□ 0.46
LMO3-221ENST00000539534 NEUROD1Q13562 356 aa17.94■□□□□ 0.46
LMO3-221ENST00000539534 RPGRIP1LQ68CZ1 1315 aa17.93■□□□□ 0.46
LMO3-221ENST00000539534 ADGRB3O60242 1522 aa17.93■□□□□ 0.46
LMO3-221ENST00000539534 TMEM131LA2VDJ0 1609 aa17.92■□□□□ 0.46
LMO3-221ENST00000539534 MYO3AQ8NEV4 1616 aa17.92■□□□□ 0.46
LMO3-221ENST00000539534 STAG3Q9UJ98 1225 aa17.92■□□□□ 0.46
LMO3-221ENST00000539534 CHGAP10645 457 aaKnown RBP17.91■□□□□ 0.46
LMO3-221ENST00000539534 CEP170BQ9Y4F5 1589 aaPredicted RBP17.91■□□□□ 0.46
LMO3-221ENST00000539534 TMEM2Q9UHN6 1383 aa17.91■□□□□ 0.46
LMO3-221ENST00000539534 RGL3Q3MIN7 710 aa17.9■□□□□ 0.46
LMO3-221ENST00000539534 L3MBTL2Q969R5 705 aa17.89■□□□□ 0.45
LMO3-221ENST00000539534 LMTK3Q96Q04 1460 aa17.88■□□□□ 0.45
LMO3-221ENST00000539534 ARHGAP23Q9P227 1491 aa17.88■□□□□ 0.45
LMO3-221ENST00000539534 ZFYVE9O95405 1425 aa17.88■□□□□ 0.45
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