RNA–Protein interactions for RNA: ENST00000539387.5

NDUFC1-210, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NDUFC1, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-210ENST00000539387 ESF1Q9H501 851 aaKnown RBP22.64■■□□□ 1.21
NDUFC1-210ENST00000539387 RIMS1Q86UR5 1692 aaKnown RBP22.61■■□□□ 1.21
NDUFC1-210ENST00000539387 FER1L4A9Z1Z3 1794 aa22.61■■□□□ 1.21
NDUFC1-210ENST00000539387 ROCK1Q13464 1354 aa22.6■■□□□ 1.21
NDUFC1-210ENST00000539387 ERBINQ96RT1 1412 aa22.58■■□□□ 1.21
NDUFC1-210ENST00000539387 PTPRMP28827 1452 aa22.58■■□□□ 1.2
NDUFC1-210ENST00000539387 EIF2AK4Q9P2K8 1649 aaKnown RBP22.56■■□□□ 1.2
NDUFC1-210ENST00000539387 ANKRD50Q9ULJ7 1429 aa22.55■■□□□ 1.2
NDUFC1-210ENST00000539387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.53■■□□□ 1.2
NDUFC1-210ENST00000539387 CNTLNQ9NXG0 1405 aa22.52■■□□□ 1.2
NDUFC1-210ENST00000539387 CEBPAP49715 358 aaPredicted RBP22.52■■□□□ 1.2
NDUFC1-210ENST00000539387 WASHC2CQ9Y4E1 1318 aa22.52■■□□□ 1.2
NDUFC1-210ENST00000539387 RNF17Q9BXT8 1623 aaKnown RBP22.51■■□□□ 1.19
NDUFC1-210ENST00000539387 CLTCQ00610 1675 aaKnown RBP22.49■■□□□ 1.19
NDUFC1-210ENST00000539387 KDM5DQ9BY66 1539 aa22.47■■□□□ 1.19
NDUFC1-210ENST00000539387 ZMYM3Q14202 1370 aa22.47■■□□□ 1.19
NDUFC1-210ENST00000539387 MROH1Q8NDA8 1641 aa22.46■■□□□ 1.19
NDUFC1-210ENST00000539387 KANK1Q14678 1352 aa22.45■■□□□ 1.18
NDUFC1-210ENST00000539387 NAIPQ13075 1403 aa22.44■■□□□ 1.18
NDUFC1-210ENST00000539387 MROH2AA6NES4 1674 aa22.43■■□□□ 1.18
NDUFC1-210ENST00000539387 C3P01024 1663 aa22.43■■□□□ 1.18
NDUFC1-210ENST00000539387 PRDM15P57071 1507 aaPredicted RBP22.43■■□□□ 1.18
NDUFC1-210ENST00000539387 DEPDC5O75140 1603 aa22.42■■□□□ 1.18
NDUFC1-210ENST00000539387 ABCC3O15438 1527 aa22.42■■□□□ 1.18
NDUFC1-210ENST00000539387 FAM135AQ9P2D6 1515 aa22.42■■□□□ 1.18
NDUFC1-210ENST00000539387 HFM1A2PYH4 1435 aa22.42■■□□□ 1.18
NDUFC1-210ENST00000539387 CEP152O94986 1710 aa22.39■■□□□ 1.17
NDUFC1-210ENST00000539387 ZC3H13Q5T200 1668 aaKnown RBP22.39■■□□□ 1.17
NDUFC1-210ENST00000539387 GCC2Q8IWJ2 1684 aa22.39■■□□□ 1.17
NDUFC1-210ENST00000539387 UNC13BO14795 1591 aa22.35■■□□□ 1.17
NDUFC1-210ENST00000539387 FBXO31Q5XUX0 539 aaPredicted RBP22.35■■□□□ 1.17
NDUFC1-210ENST00000539387 NUP155O75694 1391 aa22.35■■□□□ 1.17
NDUFC1-210ENST00000539387 VWDEQ8N2E2 1590 aa22.34■■□□□ 1.17
NDUFC1-210ENST00000539387 CAMSAP1Q5T5Y3 1602 aa22.34■■□□□ 1.17
NDUFC1-210ENST00000539387 PZPP20742 1482 aa22.34■■□□□ 1.17
NDUFC1-210ENST00000539387 NPATQ14207 1427 aa22.32■■□□□ 1.16
NDUFC1-210ENST00000539387 MSH5O43196 834 aa22.32■■□□□ 1.16
NDUFC1-210ENST00000539387 TRIM52Q96A61 297 aa22.32■■□□□ 1.16
NDUFC1-210ENST00000539387 POTEDQ86YR6 584 aa22.31■■□□□ 1.16
NDUFC1-210ENST00000539387 LMTK2Q8IWU2 1503 aa22.31■■□□□ 1.16
NDUFC1-210ENST00000539387 SETD5Q9C0A6 1442 aa22.29■■□□□ 1.16
NDUFC1-210ENST00000539387 ARHGAP31Q2M1Z3 1444 aa22.28■■□□□ 1.16
NDUFC1-210ENST00000539387 TNRQ92752 1358 aa22.27■■□□□ 1.16
NDUFC1-210ENST00000539387 UHRF1BP1Q6BDS2 1440 aa22.27■■□□□ 1.16
NDUFC1-210ENST00000539387 IQGAP3Q86VI3 1631 aa22.27■■□□□ 1.16
NDUFC1-210ENST00000539387 EFCAB6Q5THR3 1501 aa22.26■■□□□ 1.15
NDUFC1-210ENST00000539387 LMTK3Q96Q04 1460 aa22.26■■□□□ 1.15
NDUFC1-210ENST00000539387 PREX1Q8TCU6 1659 aa22.26■■□□□ 1.15
NDUFC1-210ENST00000539387 SETD1BQ9UPS6 1966 aaKnown RBP22.25■■□□□ 1.15
NDUFC1-210ENST00000539387 ERVK-7P63135 1459 aa22.25■■□□□ 1.15
NDUFC1-210ENST00000539387 TET3O43151 1660 aa22.24■■□□□ 1.15
NDUFC1-210ENST00000539387 CFAP65Q6ZU64 1925 aaKnown RBP22.24■■□□□ 1.15
NDUFC1-210ENST00000539387 RAB3GAP2Q9H2M9 1393 aa22.23■■□□□ 1.15
NDUFC1-210ENST00000539387 HSPA2P54652 639 aa22.22■■□□□ 1.15
NDUFC1-210ENST00000539387 TRIM26Q12899 539 aaPredicted RBP22.22■■□□□ 1.15
NDUFC1-210ENST00000539387 SPATA31D1Q6ZQQ2 1576 aa22.21■■□□□ 1.15
NDUFC1-210ENST00000539387 MYO3AQ8NEV4 1616 aa22.2■■□□□ 1.15
NDUFC1-210ENST00000539387 SLC4A1APQ9BWU0 796 aaKnown RBP22.19■■□□□ 1.14
NDUFC1-210ENST00000539387 RPRD2Q5VT52 1461 aaKnown RBP22.19■■□□□ 1.14
NDUFC1-210ENST00000539387 E9PCH4 1651 aa22.17■■□□□ 1.14
NDUFC1-210ENST00000539387 CEP170BQ9Y4F5 1589 aaPredicted RBP22.16■■□□□ 1.14
NDUFC1-210ENST00000539387 NLRP1Q9C000 1473 aa22.15■■□□□ 1.14
NDUFC1-210ENST00000539387 PKD2Q13563 968 aa22.15■■□□□ 1.14
NDUFC1-210ENST00000539387 A2ML1A8K2U0 1454 aa22.15■■□□□ 1.14
NDUFC1-210ENST00000539387 NOS1P29475 1434 aa22.14■■□□□ 1.14
NDUFC1-210ENST00000539387 ACIN1Q9UKV3 1341 aaKnown RBP22.14■■□□□ 1.14
NDUFC1-210ENST00000539387 SYNMO15061 1565 aa22.12■■□□□ 1.13
NDUFC1-210ENST00000539387 ZNF142P52746 1687 aaPredicted RBP22.12■■□□□ 1.13
NDUFC1-210ENST00000539387 MPHOSPH9Q99550 1183 aa22.12■■□□□ 1.13
NDUFC1-210ENST00000539387 IDI1Q13907 227 aa22.1■■□□□ 1.13
NDUFC1-210ENST00000539387 HRCP23327 699 aa22.09■■□□□ 1.13
NDUFC1-210ENST00000539387 STAG3Q9UJ98 1225 aa22.09■■□□□ 1.13
NDUFC1-210ENST00000539387 UGGT1Q9NYU2 1555 aa22.08■■□□□ 1.13
NDUFC1-210ENST00000539387 SLC52A1Q9NWF4 448 aa22.08■■□□□ 1.13
NDUFC1-210ENST00000539387 THEMISQ8N1K5 641 aaPredicted RBP22.07■■□□□ 1.12
NDUFC1-210ENST00000539387 PIK3C2BO00750 1634 aa22.05■■□□□ 1.12
NDUFC1-210ENST00000539387 CHGAP10645 457 aaKnown RBP22.04■■□□□ 1.12
NDUFC1-210ENST00000539387 PTPRTO14522 1441 aa22.04■■□□□ 1.12
NDUFC1-210ENST00000539387 SPHKAPQ2M3C7 1700 aa22.03■■□□□ 1.12
NDUFC1-210ENST00000539387 NCKAP5LQ9HCH0 1330 aa22.02■■□□□ 1.12
NDUFC1-210ENST00000539387 UBR1Q8IWV7 1749 aa22.01■■□□□ 1.11
NDUFC1-210ENST00000539387 PLA2R1Q13018 1463 aa22■■□□□ 1.11
NDUFC1-210ENST00000539387 ADGRB3O60242 1522 aa21.99■■□□□ 1.11
NDUFC1-210ENST00000539387 TRPM2O94759 1503 aa21.99■■□□□ 1.11
NDUFC1-210ENST00000539387 STRCQ7RTU9 1775 aa21.97■■□□□ 1.11
NDUFC1-210ENST00000539387 ANKLE2Q86XL3 938 aa21.97■■□□□ 1.11
NDUFC1-210ENST00000539387 PCGF6Q9BYE7 350 aa21.97■■□□□ 1.11
NDUFC1-210ENST00000539387 CLTCL1P53675 1640 aa21.95■■□□□ 1.1
NDUFC1-210ENST00000539387 DMRT2Q9Y5R5 561 aa21.94■■□□□ 1.1
NDUFC1-210ENST00000539387 TMEM2Q9UHN6 1383 aa21.94■■□□□ 1.1
NDUFC1-210ENST00000539387 KDM5AP29375 1690 aaKnown RBP21.94■■□□□ 1.1
NDUFC1-210ENST00000539387 TMEM131LA2VDJ0 1609 aa21.93■■□□□ 1.1
NDUFC1-210ENST00000539387 TXNDC2Q86VQ3 553 aa21.93■■□□□ 1.1
NDUFC1-210ENST00000539387 EID1Q9Y6B2 187 aa21.93■■□□□ 1.1
NDUFC1-210ENST00000539387 SLIT1O75093 1534 aa21.91■■□□□ 1.1
NDUFC1-210ENST00000539387 ARHGAP23Q9P227 1491 aa21.91■■□□□ 1.1
NDUFC1-210ENST00000539387 CCDC144AA2RUR9 1427 aa21.91■■□□□ 1.1
NDUFC1-210ENST00000539387 LTKP29376 864 aa21.91■■□□□ 1.1
NDUFC1-210ENST00000539387 ZNF326Q5BKZ1 582 aaKnown RBP21.91■■□□□ 1.1
NDUFC1-210ENST00000539387 MYO5BQ9ULV0 1848 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms