RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 WASHC2CQ9Y4E1 1318 aa12.73□□□□□ -0.37
LPCAT3-208ENST00000538987 HRCP23327 699 aa12.73□□□□□ -0.37
LPCAT3-208ENST00000538987 NUP155O75694 1391 aa12.72□□□□□ -0.37
LPCAT3-208ENST00000538987 REREQ9P2R6 1566 aa12.7□□□□□ -0.38
LPCAT3-208ENST00000538987 SLC4A1APQ9BWU0 796 aaKnown RBP12.7□□□□□ -0.38
LPCAT3-208ENST00000538987 GCC2Q8IWJ2 1684 aa12.7□□□□□ -0.38
LPCAT3-208ENST00000538987 AGLP35573 1532 aa12.69□□□□□ -0.38
LPCAT3-208ENST00000538987 PPP6R1Q9UPN7 881 aa12.69□□□□□ -0.38
LPCAT3-208ENST00000538987 PLPPR3Q6T4P5 718 aa12.68□□□□□ -0.38
LPCAT3-208ENST00000538987 EIF2AK4Q9P2K8 1649 aaKnown RBP12.67□□□□□ -0.38
LPCAT3-208ENST00000538987 MPHOSPH9Q99550 1183 aa12.67□□□□□ -0.38
LPCAT3-208ENST00000538987 PKD2Q13563 968 aa12.64□□□□□ -0.39
LPCAT3-208ENST00000538987 SIGLEC1Q9BZZ2 1709 aa12.64□□□□□ -0.39
LPCAT3-208ENST00000538987 FOXD1Q16676 465 aa12.62□□□□□ -0.39
LPCAT3-208ENST00000538987 CCER1Q8TC90 406 aaPredicted RBP12.62□□□□□ -0.39
LPCAT3-208ENST00000538987 UNC13BO14795 1591 aa12.61□□□□□ -0.39
LPCAT3-208ENST00000538987 CEBPAP49715 358 aaPredicted RBP12.61□□□□□ -0.39
LPCAT3-208ENST00000538987 BCORL1Q5H9F3 1711 aa12.61□□□□□ -0.39
LPCAT3-208ENST00000538987 RNF17Q9BXT8 1623 aaKnown RBP12.61□□□□□ -0.39
LPCAT3-208ENST00000538987 PRDM15P57071 1507 aaPredicted RBP12.61□□□□□ -0.39
LPCAT3-208ENST00000538987 ZMYM3Q14202 1370 aa12.6□□□□□ -0.39
LPCAT3-208ENST00000538987 KDM5DQ9BY66 1539 aa12.6□□□□□ -0.39
LPCAT3-208ENST00000538987 FAM135AQ9P2D6 1515 aa12.6□□□□□ -0.39
LPCAT3-208ENST00000538987 CNTLNQ9NXG0 1405 aa12.6□□□□□ -0.39
LPCAT3-208ENST00000538987 DEPDC5O75140 1603 aa12.59□□□□□ -0.39
LPCAT3-208ENST00000538987 PZPP20742 1482 aa12.59□□□□□ -0.39
LPCAT3-208ENST00000538987 MROH1Q8NDA8 1641 aa12.59□□□□□ -0.39
LPCAT3-208ENST00000538987 ABCC3O15438 1527 aa12.58□□□□□ -0.4
LPCAT3-208ENST00000538987 FBXO31Q5XUX0 539 aaPredicted RBP12.58□□□□□ -0.4
LPCAT3-208ENST00000538987 KDM4FA0A1W2PPD8 638 aa12.57□□□□□ -0.4
LPCAT3-208ENST00000538987 IQGAP3Q86VI3 1631 aa12.57□□□□□ -0.4
LPCAT3-208ENST00000538987 CLTCQ00610 1675 aaKnown RBP12.57□□□□□ -0.4
LPCAT3-208ENST00000538987 DHX57Q6P158 1386 aaKnown RBP12.56□□□□□ -0.4
LPCAT3-208ENST00000538987 LMTK2Q8IWU2 1503 aa12.56□□□□□ -0.4
LPCAT3-208ENST00000538987 VWDEQ8N2E2 1590 aa12.56□□□□□ -0.4
LPCAT3-208ENST00000538987 CEP152O94986 1710 aa12.55□□□□□ -0.4
LPCAT3-208ENST00000538987 MADDQ8WXG6 1647 aa12.55□□□□□ -0.4
LPCAT3-208ENST00000538987 ZC3H13Q5T200 1668 aaKnown RBP12.54□□□□□ -0.4
LPCAT3-208ENST00000538987 NPATQ14207 1427 aa12.54□□□□□ -0.4
LPCAT3-208ENST00000538987 ARHGAP31Q2M1Z3 1444 aa12.54□□□□□ -0.4
LPCAT3-208ENST00000538987 FER1L4A9Z1Z3 1794 aa12.53□□□□□ -0.4
LPCAT3-208ENST00000538987 CHGAP10645 457 aaKnown RBP12.53□□□□□ -0.4
LPCAT3-208ENST00000538987 NEUROD1Q13562 356 aa12.53□□□□□ -0.4
LPCAT3-208ENST00000538987 STAG3Q9UJ98 1225 aa12.53□□□□□ -0.4
LPCAT3-208ENST00000538987 TET3O43151 1660 aa12.53□□□□□ -0.4
LPCAT3-208ENST00000538987 ADAMTSL3P82987 1691 aa12.53□□□□□ -0.4
LPCAT3-208ENST00000538987 EFCAB6Q5THR3 1501 aa12.52□□□□□ -0.4
LPCAT3-208ENST00000538987 CAMSAP1Q5T5Y3 1602 aa12.52□□□□□ -0.4
LPCAT3-208ENST00000538987 RIMS1Q86UR5 1692 aaKnown RBP12.52□□□□□ -0.4
LPCAT3-208ENST00000538987 RPRD2Q5VT52 1461 aaKnown RBP12.52□□□□□ -0.41
LPCAT3-208ENST00000538987 PTPRMP28827 1452 aa12.51□□□□□ -0.41
LPCAT3-208ENST00000538987 SIN3AQ96ST3 1273 aa12.5□□□□□ -0.41
LPCAT3-208ENST00000538987 SLC52A1Q9NWF4 448 aa12.5□□□□□ -0.41
LPCAT3-208ENST00000538987 TNRQ92752 1358 aa12.5□□□□□ -0.41
LPCAT3-208ENST00000538987 E9PCH4 1651 aa12.49□□□□□ -0.41
LPCAT3-208ENST00000538987 MROH2AA6NES4 1674 aa12.48□□□□□ -0.41
LPCAT3-208ENST00000538987 ERVK-7P63135 1459 aa12.48□□□□□ -0.41
LPCAT3-208ENST00000538987 CCDC144AA2RUR9 1427 aa12.48□□□□□ -0.41
LPCAT3-208ENST00000538987 ANKRD30BQ9BXX2 1392 aa12.48□□□□□ -0.41
LPCAT3-208ENST00000538987 IDI1Q13907 227 aa12.48□□□□□ -0.41
LPCAT3-208ENST00000538987 RGL3Q3MIN7 710 aa12.47□□□□□ -0.41
LPCAT3-208ENST00000538987 ZNF326Q5BKZ1 582 aaKnown RBP12.47□□□□□ -0.41
LPCAT3-208ENST00000538987 PTPRTO14522 1441 aa12.46□□□□□ -0.41
LPCAT3-208ENST00000538987 NOS1P29475 1434 aa12.46□□□□□ -0.41
LPCAT3-208ENST00000538987 CLSPNQ9HAW4 1339 aa12.46□□□□□ -0.41
LPCAT3-208ENST00000538987 C3P01024 1663 aa12.46□□□□□ -0.41
LPCAT3-208ENST00000538987 CFAP65Q6ZU64 1925 aaKnown RBP12.46□□□□□ -0.42
LPCAT3-208ENST00000538987 PLA2R1Q13018 1463 aa12.45□□□□□ -0.42
LPCAT3-208ENST00000538987 PREX1Q8TCU6 1659 aa12.44□□□□□ -0.42
LPCAT3-208ENST00000538987 SPATA31D1Q6ZQQ2 1576 aa12.43□□□□□ -0.42
LPCAT3-208ENST00000538987 TRPM2O94759 1503 aa12.42□□□□□ -0.42
LPCAT3-208ENST00000538987 THEMISQ8N1K5 641 aaPredicted RBP12.42□□□□□ -0.42
LPCAT3-208ENST00000538987 UGGT1Q9NYU2 1555 aa12.42□□□□□ -0.42
LPCAT3-208ENST00000538987 SPHKAPQ2M3C7 1700 aa12.42□□□□□ -0.42
LPCAT3-208ENST00000538987 SYNMO15061 1565 aa12.41□□□□□ -0.42
LPCAT3-208ENST00000538987 UHRF1BP1Q6BDS2 1440 aa12.41□□□□□ -0.42
LPCAT3-208ENST00000538987 TONSLQ96HA7 1378 aa12.41□□□□□ -0.42
LPCAT3-208ENST00000538987 NLRP1Q9C000 1473 aa12.4□□□□□ -0.42
LPCAT3-208ENST00000538987 HDGFP51858 240 aaKnown RBP12.4□□□□□ -0.42
LPCAT3-208ENST00000538987 KDM2AQ9Y2K7 1162 aa12.4□□□□□ -0.42
LPCAT3-208ENST00000538987 DCAF11Q8TEB1 546 aa12.39□□□□□ -0.43
LPCAT3-208ENST00000538987 BCANQ96GW7 911 aa12.39□□□□□ -0.43
LPCAT3-208ENST00000538987 CLTCL1P53675 1640 aa12.38□□□□□ -0.43
LPCAT3-208ENST00000538987 PPP1R15AO75807 674 aaPredicted RBP12.38□□□□□ -0.43
LPCAT3-208ENST00000538987 NUTM2DQ5VT03 806 aaPredicted RBP12.38□□□□□ -0.43
LPCAT3-208ENST00000538987 EID1Q9Y6B2 187 aa12.38□□□□□ -0.43
LPCAT3-208ENST00000538987 L3MBTL2Q969R5 705 aa12.37□□□□□ -0.43
LPCAT3-208ENST00000538987 SENP3Q9H4L4 574 aaPredicted RBP12.37□□□□□ -0.43
LPCAT3-208ENST00000538987 A2ML1A8K2U0 1454 aa12.37□□□□□ -0.43
LPCAT3-208ENST00000538987 RPGRIP1LQ68CZ1 1315 aa12.37□□□□□ -0.43
LPCAT3-208ENST00000538987 HSPA2P54652 639 aa12.36□□□□□ -0.43
LPCAT3-208ENST00000538987 TXNDC2Q86VQ3 553 aa12.36□□□□□ -0.43
LPCAT3-208ENST00000538987 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.36□□□□□ -0.43
LPCAT3-208ENST00000538987 TIMELESSQ9UNS1 1208 aa12.36□□□□□ -0.43
LPCAT3-208ENST00000538987 PIK3C2BO00750 1634 aa12.36□□□□□ -0.43
LPCAT3-208ENST00000538987 VGFO15240 615 aaPredicted RBP12.35□□□□□ -0.43
LPCAT3-208ENST00000538987 ANKLE2Q86XL3 938 aa12.35□□□□□ -0.43
LPCAT3-208ENST00000538987 MYO3AQ8NEV4 1616 aa12.34□□□□□ -0.43
LPCAT3-208ENST00000538987 CEP170BQ9Y4F5 1589 aaPredicted RBP12.34□□□□□ -0.43
LPCAT3-208ENST00000538987 SETD1BQ9UPS6 1966 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms