RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 KIF15Q9NS87 1388 aa30.55■■■□□ 2.48
COPS7A-208ENST00000538410 ANKRD50Q9ULJ7 1429 aa30.5■■■□□ 2.47
COPS7A-208ENST00000538410 ESF1Q9H501 851 aaKnown RBP30.49■■■□□ 2.47
COPS7A-208ENST00000538410 DUOX2Q9NRD8 1548 aa30.48■■■□□ 2.47
COPS7A-208ENST00000538410 A2MP01023 1474 aa30.48■■■□□ 2.47
COPS7A-208ENST00000538410 LMTK3Q96Q04 1460 aa30.48■■■□□ 2.47
COPS7A-208ENST00000538410 CCER1Q8TC90 406 aaPredicted RBP30.47■■■□□ 2.47
COPS7A-208ENST00000538410 CEBPAP49715 358 aaPredicted RBP30.46■■■□□ 2.47
COPS7A-208ENST00000538410 DHX57Q6P158 1386 aaKnown RBP30.45■■■□□ 2.46
COPS7A-208ENST00000538410 ACIN1Q9UKV3 1341 aaKnown RBP30.44■■■□□ 2.46
COPS7A-208ENST00000538410 C3P01024 1663 aa30.39■■■□□ 2.46
COPS7A-208ENST00000538410 ERBINQ96RT1 1412 aa30.39■■■□□ 2.46
COPS7A-208ENST00000538410 CNTLNQ9NXG0 1405 aa30.39■■■□□ 2.46
COPS7A-208ENST00000538410 PREX1Q8TCU6 1659 aa30.37■■■□□ 2.45
COPS7A-208ENST00000538410 SETD1BQ9UPS6 1966 aaKnown RBP30.36■■■□□ 2.45
COPS7A-208ENST00000538410 HSPA2P54652 639 aa30.34■■■□□ 2.45
COPS7A-208ENST00000538410 TRIM52Q96A61 297 aa30.34■■■□□ 2.45
COPS7A-208ENST00000538410 GGT6Q6P531 493 aa30.33■■■□□ 2.45
COPS7A-208ENST00000538410 DHX29Q7Z478 1369 aaKnown RBP30.33■■■□□ 2.45
COPS7A-208ENST00000538410 EIF2AK4Q9P2K8 1649 aaKnown RBP30.33■■■□□ 2.45
COPS7A-208ENST00000538410 UNC13BO14795 1591 aa30.32■■■□□ 2.44
COPS7A-208ENST00000538410 MROH2AA6NES4 1674 aa30.32■■■□□ 2.44
COPS7A-208ENST00000538410 CLTCQ00610 1675 aaKnown RBP30.29■■■□□ 2.44
COPS7A-208ENST00000538410 KDM5DQ9BY66 1539 aa30.28■■■□□ 2.44
COPS7A-208ENST00000538410 UHRF1BP1Q6BDS2 1440 aa30.26■■■□□ 2.44
COPS7A-208ENST00000538410 PPP6R1Q9UPN7 881 aa30.26■■■□□ 2.44
COPS7A-208ENST00000538410 ZMYM3Q14202 1370 aa30.26■■■□□ 2.43
COPS7A-208ENST00000538410 CLSPNQ9HAW4 1339 aa30.25■■■□□ 2.43
COPS7A-208ENST00000538410 DEPDC5O75140 1603 aa30.25■■■□□ 2.43
COPS7A-208ENST00000538410 PZPP20742 1482 aa30.24■■■□□ 2.43
COPS7A-208ENST00000538410 KIF3BO15066 747 aa30.23■■■□□ 2.43
COPS7A-208ENST00000538410 MPHOSPH9Q99550 1183 aa30.22■■■□□ 2.43
COPS7A-208ENST00000538410 NUP155O75694 1391 aa30.22■■■□□ 2.43
COPS7A-208ENST00000538410 IQGAP3Q86VI3 1631 aa30.2■■■□□ 2.43
COPS7A-208ENST00000538410 NPATQ14207 1427 aa30.18■■■□□ 2.42
COPS7A-208ENST00000538410 RNF17Q9BXT8 1623 aaKnown RBP30.18■■■□□ 2.42
COPS7A-208ENST00000538410 FAM135AQ9P2D6 1515 aa30.16■■■□□ 2.42
COPS7A-208ENST00000538410 ZEB1P37275 1124 aaPredicted RBP30.15■■■□□ 2.42
COPS7A-208ENST00000538410 SLC4A1APQ9BWU0 796 aaKnown RBP30.15■■■□□ 2.42
COPS7A-208ENST00000538410 MROH1Q8NDA8 1641 aa30.15■■■□□ 2.42
COPS7A-208ENST00000538410 PRDM15P57071 1507 aaPredicted RBP30.13■■■□□ 2.41
COPS7A-208ENST00000538410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.12■■■□□ 2.41
COPS7A-208ENST00000538410 VWDEQ8N2E2 1590 aa30.1■■■□□ 2.41
COPS7A-208ENST00000538410 WASHC2CQ9Y4E1 1318 aa30.08■■■□□ 2.41
COPS7A-208ENST00000538410 STRCQ7RTU9 1775 aa30.07■■■□□ 2.4
COPS7A-208ENST00000538410 KANK1Q14678 1352 aa30.05■■■□□ 2.4
COPS7A-208ENST00000538410 TET3O43151 1660 aa30.04■■■□□ 2.4
COPS7A-208ENST00000538410 PKD2Q13563 968 aa30.04■■■□□ 2.4
COPS7A-208ENST00000538410 MYO3AQ8NEV4 1616 aa30.03■■■□□ 2.4
COPS7A-208ENST00000538410 CEP152O94986 1710 aa30.03■■■□□ 2.4
COPS7A-208ENST00000538410 ILDR1Q86SU0 546 aaPredicted RBP30.03■■■□□ 2.4
COPS7A-208ENST00000538410 FOXD1Q16676 465 aa30.02■■■□□ 2.4
COPS7A-208ENST00000538410 DMRT2Q9Y5R5 561 aa30.02■■■□□ 2.4
COPS7A-208ENST00000538410 ZNF142P52746 1687 aaPredicted RBP29.99■■■□□ 2.39
COPS7A-208ENST00000538410 ANKRD30BQ9BXX2 1392 aa29.98■■■□□ 2.39
COPS7A-208ENST00000538410 E9PCH4 1651 aa29.98■■■□□ 2.39
COPS7A-208ENST00000538410 LMTK2Q8IWU2 1503 aa29.97■■■□□ 2.39
COPS7A-208ENST00000538410 ZC3H13Q5T200 1668 aaKnown RBP29.97■■■□□ 2.39
COPS7A-208ENST00000538410 SIN3AQ96ST3 1273 aa29.96■■■□□ 2.39
COPS7A-208ENST00000538410 CEP170BQ9Y4F5 1589 aaPredicted RBP29.96■■■□□ 2.39
COPS7A-208ENST00000538410 FBXO31Q5XUX0 539 aaPredicted RBP29.96■■■□□ 2.39
COPS7A-208ENST00000538410 CAMSAP1Q5T5Y3 1602 aa29.96■■■□□ 2.39
COPS7A-208ENST00000538410 ABCC3O15438 1527 aa29.94■■■□□ 2.38
COPS7A-208ENST00000538410 TNRQ92752 1358 aa29.92■■■□□ 2.38
COPS7A-208ENST00000538410 EFCAB6Q5THR3 1501 aa29.91■■■□□ 2.38
COPS7A-208ENST00000538410 PTPRTO14522 1441 aa29.9■■■□□ 2.38
COPS7A-208ENST00000538410 NEUROD1Q13562 356 aa29.89■■■□□ 2.38
COPS7A-208ENST00000538410 A2ML1A8K2U0 1454 aa29.89■■■□□ 2.38
COPS7A-208ENST00000538410 SPHKAPQ2M3C7 1700 aa29.87■■■□□ 2.37
COPS7A-208ENST00000538410 PLA2R1Q13018 1463 aa29.85■■■□□ 2.37
COPS7A-208ENST00000538410 FBXO41Q8TF61 875 aa29.85■■■□□ 2.37
COPS7A-208ENST00000538410 NCKAP5LQ9HCH0 1330 aa29.83■■■□□ 2.37
COPS7A-208ENST00000538410 RPRD2Q5VT52 1461 aaKnown RBP29.83■■■□□ 2.37
COPS7A-208ENST00000538410 CFAP65Q6ZU64 1925 aaKnown RBP29.82■■■□□ 2.36
COPS7A-208ENST00000538410 CERKQ8TCT0 537 aa29.81■■■□□ 2.36
COPS7A-208ENST00000538410 NLRP1Q9C000 1473 aa29.8■■■□□ 2.36
COPS7A-208ENST00000538410 TIMELESSQ9UNS1 1208 aa29.8■■■□□ 2.36
COPS7A-208ENST00000538410 SPATA31D1Q6ZQQ2 1576 aa29.8■■■□□ 2.36
COPS7A-208ENST00000538410 ERVK-7P63135 1459 aa29.77■■■□□ 2.36
COPS7A-208ENST00000538410 TRPM2O94759 1503 aa29.77■■■□□ 2.36
COPS7A-208ENST00000538410 ARHGAP31Q2M1Z3 1444 aa29.75■■■□□ 2.35
COPS7A-208ENST00000538410 TONSLQ96HA7 1378 aa29.75■■■□□ 2.35
COPS7A-208ENST00000538410 CCDC144AA2RUR9 1427 aa29.74■■■□□ 2.35
COPS7A-208ENST00000538410 UGGT1Q9NYU2 1555 aa29.73■■■□□ 2.35
COPS7A-208ENST00000538410 THEMISQ8N1K5 641 aaPredicted RBP29.73■■■□□ 2.35
COPS7A-208ENST00000538410 POLR1AO95602 1720 aaPredicted RBP29.7■■■□□ 2.35
COPS7A-208ENST00000538410 CLTCL1P53675 1640 aa29.69■■■□□ 2.34
COPS7A-208ENST00000538410 ANKLE2Q86XL3 938 aa29.65■■■□□ 2.34
COPS7A-208ENST00000538410 LTBP4Q8N2S1 1624 aa29.64■■■□□ 2.34
COPS7A-208ENST00000538410 KIF1BO60333 1816 aa29.64■■■□□ 2.34
COPS7A-208ENST00000538410 NOS1P29475 1434 aa29.63■■■□□ 2.33
COPS7A-208ENST00000538410 NEURL4Q96JN8 1562 aa29.61■■■□□ 2.33
COPS7A-208ENST00000538410 UBR1Q8IWV7 1749 aa29.61■■■□□ 2.33
COPS7A-208ENST00000538410 SYNMO15061 1565 aa29.61■■■□□ 2.33
COPS7A-208ENST00000538410 L3MBTL2Q969R5 705 aa29.6■■■□□ 2.33
COPS7A-208ENST00000538410 PPP1R15AO75807 674 aaPredicted RBP29.6■■■□□ 2.33
COPS7A-208ENST00000538410 ZNF335Q9H4Z2 1342 aaPredicted RBP29.59■■■□□ 2.33
COPS7A-208ENST00000538410 PIK3C2BO00750 1634 aa29.59■■■□□ 2.33
COPS7A-208ENST00000538410 SPATA31E1Q6ZUB1 1445 aa29.53■■■□□ 2.32
COPS7A-208ENST00000538410 MED14O60244 1454 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms