RNA–Protein interactions for RNA: ENST00000537597.1

SRRM4-202, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-202ENST00000537597 MROH1Q8NDA8 1641 aa23.21■■□□□ 1.31
SRRM4-202ENST00000537597 FAM135AQ9P2D6 1515 aa23.19■■□□□ 1.3
SRRM4-202ENST00000537597 GGT6Q6P531 493 aa23.19■■□□□ 1.3
SRRM4-202ENST00000537597 KDM5DQ9BY66 1539 aa23.18■■□□□ 1.3
SRRM4-202ENST00000537597 ZMYM3Q14202 1370 aa23.16■■□□□ 1.3
SRRM4-202ENST00000537597 MROH2AA6NES4 1674 aa23.16■■□□□ 1.3
SRRM4-202ENST00000537597 CEBPAP49715 358 aaPredicted RBP23.15■■□□□ 1.3
SRRM4-202ENST00000537597 DEPDC5O75140 1603 aa23.15■■□□□ 1.3
SRRM4-202ENST00000537597 C3P01024 1663 aa23.13■■□□□ 1.29
SRRM4-202ENST00000537597 ANKRD50Q9ULJ7 1429 aa23.13■■□□□ 1.29
SRRM4-202ENST00000537597 VWDEQ8N2E2 1590 aa23.13■■□□□ 1.29
SRRM4-202ENST00000537597 PRDM15P57071 1507 aaPredicted RBP23.11■■□□□ 1.29
SRRM4-202ENST00000537597 CLTCQ00610 1675 aaKnown RBP23.1■■□□□ 1.29
SRRM4-202ENST00000537597 ABCC3O15438 1527 aa23.09■■□□□ 1.29
SRRM4-202ENST00000537597 SETD1BQ9UPS6 1966 aaKnown RBP23.08■■□□□ 1.29
SRRM4-202ENST00000537597 NPATQ14207 1427 aa23.08■■□□□ 1.28
SRRM4-202ENST00000537597 WASHC2CQ9Y4E1 1318 aa23.07■■□□□ 1.28
SRRM4-202ENST00000537597 ITGAEP38570 1179 aa23.06■■□□□ 1.28
SRRM4-202ENST00000537597 LMTK2Q8IWU2 1503 aa23.06■■□□□ 1.28
SRRM4-202ENST00000537597 NAIPQ13075 1403 aa23.06■■□□□ 1.28
SRRM4-202ENST00000537597 ESF1Q9H501 851 aaKnown RBP23.05■■□□□ 1.28
SRRM4-202ENST00000537597 LMTK3Q96Q04 1460 aa23.05■■□□□ 1.28
SRRM4-202ENST00000537597 ARHGAP31Q2M1Z3 1444 aa23.04■■□□□ 1.28
SRRM4-202ENST00000537597 PZPP20742 1482 aa23.04■■□□□ 1.28
SRRM4-202ENST00000537597 ZC3H13Q5T200 1668 aaKnown RBP23.03■■□□□ 1.28
SRRM4-202ENST00000537597 HFM1A2PYH4 1435 aa23.02■■□□□ 1.28
SRRM4-202ENST00000537597 UNC13BO14795 1591 aa23■■□□□ 1.27
SRRM4-202ENST00000537597 FBXO31Q5XUX0 539 aaPredicted RBP22.99■■□□□ 1.27
SRRM4-202ENST00000537597 CEP152O94986 1710 aa22.96■■□□□ 1.27
SRRM4-202ENST00000537597 CAMSAP1Q5T5Y3 1602 aa22.95■■□□□ 1.26
SRRM4-202ENST00000537597 PREX1Q8TCU6 1659 aa22.95■■□□□ 1.26
SRRM4-202ENST00000537597 GCC2Q8IWJ2 1684 aa22.94■■□□□ 1.26
SRRM4-202ENST00000537597 SPATA31D1Q6ZQQ2 1576 aa22.94■■□□□ 1.26
SRRM4-202ENST00000537597 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.94■■□□□ 1.26
SRRM4-202ENST00000537597 KANK1Q14678 1352 aa22.92■■□□□ 1.26
SRRM4-202ENST00000537597 PLPPR3Q6T4P5 718 aa22.92■■□□□ 1.26
SRRM4-202ENST00000537597 ERVK-7P63135 1459 aa22.91■■□□□ 1.26
SRRM4-202ENST00000537597 IQGAP3Q86VI3 1631 aa22.9■■□□□ 1.26
SRRM4-202ENST00000537597 UHRF1BP1Q6BDS2 1440 aa22.9■■□□□ 1.26
SRRM4-202ENST00000537597 EFCAB6Q5THR3 1501 aa22.89■■□□□ 1.26
SRRM4-202ENST00000537597 NOS1P29475 1434 aa22.89■■□□□ 1.25
SRRM4-202ENST00000537597 TNRQ92752 1358 aa22.89■■□□□ 1.25
SRRM4-202ENST00000537597 NUP155O75694 1391 aa22.87■■□□□ 1.25
SRRM4-202ENST00000537597 TET3O43151 1660 aa22.87■■□□□ 1.25
SRRM4-202ENST00000537597 RPRD2Q5VT52 1461 aaKnown RBP22.86■■□□□ 1.25
SRRM4-202ENST00000537597 ZNF142P52746 1687 aaPredicted RBP22.85■■□□□ 1.25
SRRM4-202ENST00000537597 HSPA2P54652 639 aa22.85■■□□□ 1.25
SRRM4-202ENST00000537597 MYO3AQ8NEV4 1616 aa22.85■■□□□ 1.25
SRRM4-202ENST00000537597 A2ML1A8K2U0 1454 aa22.84■■□□□ 1.25
SRRM4-202ENST00000537597 NLRP1Q9C000 1473 aa22.84■■□□□ 1.25
SRRM4-202ENST00000537597 CEP170BQ9Y4F5 1589 aaPredicted RBP22.81■■□□□ 1.24
SRRM4-202ENST00000537597 SETD5Q9C0A6 1442 aa22.81■■□□□ 1.24
SRRM4-202ENST00000537597 E9PCH4 1651 aa22.8■■□□□ 1.24
SRRM4-202ENST00000537597 HRCP23327 699 aa22.79■■□□□ 1.24
SRRM4-202ENST00000537597 SYNMO15061 1565 aa22.79■■□□□ 1.24
SRRM4-202ENST00000537597 CFAP65Q6ZU64 1925 aaKnown RBP22.78■■□□□ 1.24
SRRM4-202ENST00000537597 STRCQ7RTU9 1775 aa22.78■■□□□ 1.24
SRRM4-202ENST00000537597 PTPRTO14522 1441 aa22.77■■□□□ 1.24
SRRM4-202ENST00000537597 IDI1Q13907 227 aa22.76■■□□□ 1.23
SRRM4-202ENST00000537597 PLA2R1Q13018 1463 aa22.75■■□□□ 1.23
SRRM4-202ENST00000537597 ACIN1Q9UKV3 1341 aaKnown RBP22.74■■□□□ 1.23
SRRM4-202ENST00000537597 SLC52A1Q9NWF4 448 aa22.73■■□□□ 1.23
SRRM4-202ENST00000537597 RAB3GAP2Q9H2M9 1393 aa22.72■■□□□ 1.23
SRRM4-202ENST00000537597 PIK3C2BO00750 1634 aa22.71■■□□□ 1.23
SRRM4-202ENST00000537597 THEMISQ8N1K5 641 aaPredicted RBP22.7■■□□□ 1.22
SRRM4-202ENST00000537597 UGGT1Q9NYU2 1555 aa22.7■■□□□ 1.22
SRRM4-202ENST00000537597 KDM5AP29375 1690 aaKnown RBP22.7■■□□□ 1.22
SRRM4-202ENST00000537597 UBR1Q8IWV7 1749 aa22.69■■□□□ 1.22
SRRM4-202ENST00000537597 ARHGAP23Q9P227 1491 aa22.68■■□□□ 1.22
SRRM4-202ENST00000537597 PKD2Q13563 968 aa22.66■■□□□ 1.22
SRRM4-202ENST00000537597 TRIM52Q96A61 297 aa22.66■■□□□ 1.22
SRRM4-202ENST00000537597 MPHOSPH9Q99550 1183 aa22.66■■□□□ 1.22
SRRM4-202ENST00000537597 SLIT1O75093 1534 aa22.66■■□□□ 1.22
SRRM4-202ENST00000537597 SLC4A1APQ9BWU0 796 aaKnown RBP22.64■■□□□ 1.21
SRRM4-202ENST00000537597 NCKAP5LQ9HCH0 1330 aa22.63■■□□□ 1.21
SRRM4-202ENST00000537597 MED14O60244 1454 aa22.63■■□□□ 1.21
SRRM4-202ENST00000537597 TMEM131LA2VDJ0 1609 aa22.61■■□□□ 1.21
SRRM4-202ENST00000537597 NEURL4Q96JN8 1562 aa22.61■■□□□ 1.21
SRRM4-202ENST00000537597 SPHKAPQ2M3C7 1700 aa22.6■■□□□ 1.21
SRRM4-202ENST00000537597 LTKP29376 864 aa22.6■■□□□ 1.21
SRRM4-202ENST00000537597 DMRT2Q9Y5R5 561 aa22.6■■□□□ 1.21
SRRM4-202ENST00000537597 TRPM2O94759 1503 aa22.6■■□□□ 1.21
SRRM4-202ENST00000537597 TMEM2Q9UHN6 1383 aa22.6■■□□□ 1.21
SRRM4-202ENST00000537597 ADGRB3O60242 1522 aa22.59■■□□□ 1.21
SRRM4-202ENST00000537597 ANKLE2Q86XL3 938 aa22.58■■□□□ 1.21
SRRM4-202ENST00000537597 TRIM26Q12899 539 aaPredicted RBP22.57■■□□□ 1.2
SRRM4-202ENST00000537597 ZFYVE9O95405 1425 aa22.57■■□□□ 1.2
SRRM4-202ENST00000537597 FOXD1Q16676 465 aa22.54■■□□□ 1.2
SRRM4-202ENST00000537597 CLTCL1P53675 1640 aa22.53■■□□□ 1.2
SRRM4-202ENST00000537597 POLR1AO95602 1720 aaPredicted RBP22.52■■□□□ 1.2
SRRM4-202ENST00000537597 MYO5BQ9ULV0 1848 aa22.51■■□□□ 1.19
SRRM4-202ENST00000537597 SCAF11Q99590 1463 aaKnown RBP22.51■■□□□ 1.19
SRRM4-202ENST00000537597 TXNDC2Q86VQ3 553 aa22.5■■□□□ 1.19
SRRM4-202ENST00000537597 NPHP4O75161 1426 aaPredicted RBP22.49■■□□□ 1.19
SRRM4-202ENST00000537597 ANKRD30BQ9BXX2 1392 aa22.49■■□□□ 1.19
SRRM4-202ENST00000537597 LTBP4Q8N2S1 1624 aa22.46■■□□□ 1.19
SRRM4-202ENST00000537597 STAG3Q9UJ98 1225 aa22.46■■□□□ 1.19
SRRM4-202ENST00000537597 RIMS2Q9UQ26 1411 aa22.46■■□□□ 1.19
SRRM4-202ENST00000537597 SPATA31E1Q6ZUB1 1445 aa22.45■■□□□ 1.18
SRRM4-202ENST00000537597 EID1Q9Y6B2 187 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms