RNA–Protein interactions for RNA: ENST00000537400.1

PRKAB1-203, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 3

Gene PRKAB1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-203ENST00000537400 RNF17Q9BXT8 1623 aaKnown RBP21.07■□□□□ 0.96
PRKAB1-203ENST00000537400 SIGLEC1Q9BZZ2 1709 aa21.07■□□□□ 0.96
PRKAB1-203ENST00000537400 FAM135AQ9P2D6 1515 aa21.04■□□□□ 0.96
PRKAB1-203ENST00000537400 ILDR1Q86SU0 546 aaPredicted RBP21.04■□□□□ 0.96
PRKAB1-203ENST00000537400 DEPDC5O75140 1603 aa21.04■□□□□ 0.96
PRKAB1-203ENST00000537400 PCGF6Q9BYE7 350 aa21.02■□□□□ 0.96
PRKAB1-203ENST00000537400 PRDM15P57071 1507 aaPredicted RBP21.02■□□□□ 0.96
PRKAB1-203ENST00000537400 RAB3GAP2Q9H2M9 1393 aa21.01■□□□□ 0.95
PRKAB1-203ENST00000537400 GGT6Q6P531 493 aa21.01■□□□□ 0.95
PRKAB1-203ENST00000537400 UNC13BO14795 1591 aa21.01■□□□□ 0.95
PRKAB1-203ENST00000537400 KANK1Q14678 1352 aa21■□□□□ 0.95
PRKAB1-203ENST00000537400 MROH1Q8NDA8 1641 aa20.99■□□□□ 0.95
PRKAB1-203ENST00000537400 KDM5DQ9BY66 1539 aa20.99■□□□□ 0.95
PRKAB1-203ENST00000537400 VWDEQ8N2E2 1590 aa20.97■□□□□ 0.95
PRKAB1-203ENST00000537400 CNTLNQ9NXG0 1405 aa20.96■□□□□ 0.95
PRKAB1-203ENST00000537400 MLECQ14165 292 aa20.96■□□□□ 0.95
PRKAB1-203ENST00000537400 NUP155O75694 1391 aa20.95■□□□□ 0.94
PRKAB1-203ENST00000537400 LMTK2Q8IWU2 1503 aa20.94■□□□□ 0.94
PRKAB1-203ENST00000537400 ZC3H13Q5T200 1668 aaKnown RBP20.94■□□□□ 0.94
PRKAB1-203ENST00000537400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.94■□□□□ 0.94
PRKAB1-203ENST00000537400 ESF1Q9H501 851 aaKnown RBP20.94■□□□□ 0.94
PRKAB1-203ENST00000537400 WASHC2CQ9Y4E1 1318 aa20.94■□□□□ 0.94
PRKAB1-203ENST00000537400 ADAMTSL3P82987 1691 aa20.93■□□□□ 0.94
PRKAB1-203ENST00000537400 IQGAP3Q86VI3 1631 aa20.93■□□□□ 0.94
PRKAB1-203ENST00000537400 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
PRKAB1-203ENST00000537400 ABCC3O15438 1527 aa20.92■□□□□ 0.94
PRKAB1-203ENST00000537400 FER1L4A9Z1Z3 1794 aa20.88■□□□□ 0.93
PRKAB1-203ENST00000537400 MROH2AA6NES4 1674 aa20.88■□□□□ 0.93
PRKAB1-203ENST00000537400 ARHGAP31Q2M1Z3 1444 aa20.87■□□□□ 0.93
PRKAB1-203ENST00000537400 MADDQ8WXG6 1647 aa20.86■□□□□ 0.93
PRKAB1-203ENST00000537400 PZPP20742 1482 aa20.86■□□□□ 0.93
PRKAB1-203ENST00000537400 TET3O43151 1660 aa20.86■□□□□ 0.93
PRKAB1-203ENST00000537400 CLTCQ00610 1675 aaKnown RBP20.85■□□□□ 0.93
PRKAB1-203ENST00000537400 ZMYM3Q14202 1370 aa20.85■□□□□ 0.93
PRKAB1-203ENST00000537400 RPRD2Q5VT52 1461 aaKnown RBP20.84■□□□□ 0.93
PRKAB1-203ENST00000537400 SLC4A1APQ9BWU0 796 aaKnown RBP20.84■□□□□ 0.93
PRKAB1-203ENST00000537400 CEP152O94986 1710 aa20.84■□□□□ 0.93
PRKAB1-203ENST00000537400 EFCAB6Q5THR3 1501 aa20.83■□□□□ 0.93
PRKAB1-203ENST00000537400 CAMSAP1Q5T5Y3 1602 aa20.83■□□□□ 0.93
PRKAB1-203ENST00000537400 MPHOSPH9Q99550 1183 aa20.83■□□□□ 0.93
PRKAB1-203ENST00000537400 RIMS1Q86UR5 1692 aaKnown RBP20.8■□□□□ 0.92
PRKAB1-203ENST00000537400 NPATQ14207 1427 aa20.8■□□□□ 0.92
PRKAB1-203ENST00000537400 PTPRMP28827 1452 aa20.79■□□□□ 0.92
PRKAB1-203ENST00000537400 PKD2Q13563 968 aa20.77■□□□□ 0.92
PRKAB1-203ENST00000537400 E9PCH4 1651 aa20.75■□□□□ 0.91
PRKAB1-203ENST00000537400 C3P01024 1663 aa20.75■□□□□ 0.91
PRKAB1-203ENST00000537400 ERVK-7P63135 1459 aa20.73■□□□□ 0.91
PRKAB1-203ENST00000537400 DHX57Q6P158 1386 aaKnown RBP20.72■□□□□ 0.91
PRKAB1-203ENST00000537400 SPATA31D1Q6ZQQ2 1576 aa20.72■□□□□ 0.91
PRKAB1-203ENST00000537400 PTPRTO14522 1441 aa20.72■□□□□ 0.91
PRKAB1-203ENST00000537400 NOS1P29475 1434 aa20.72■□□□□ 0.91
PRKAB1-203ENST00000537400 CEBPAP49715 358 aaPredicted RBP20.7■□□□□ 0.9
PRKAB1-203ENST00000537400 PREX1Q8TCU6 1659 aa20.7■□□□□ 0.9
PRKAB1-203ENST00000537400 FBXO31Q5XUX0 539 aaPredicted RBP20.69■□□□□ 0.9
PRKAB1-203ENST00000537400 TNRQ92752 1358 aa20.68■□□□□ 0.9
PRKAB1-203ENST00000537400 TRPM2O94759 1503 aa20.67■□□□□ 0.9
PRKAB1-203ENST00000537400 SLC52A1Q9NWF4 448 aa20.66■□□□□ 0.9
PRKAB1-203ENST00000537400 LMTK3Q96Q04 1460 aa20.66■□□□□ 0.9
PRKAB1-203ENST00000537400 SPHKAPQ2M3C7 1700 aa20.66■□□□□ 0.9
PRKAB1-203ENST00000537400 PLA2R1Q13018 1463 aa20.65■□□□□ 0.9
PRKAB1-203ENST00000537400 ANKRD30BQ9BXX2 1392 aa20.65■□□□□ 0.9
PRKAB1-203ENST00000537400 FOXD1Q16676 465 aa20.65■□□□□ 0.9
PRKAB1-203ENST00000537400 SETD1BQ9UPS6 1966 aaKnown RBP20.65■□□□□ 0.9
PRKAB1-203ENST00000537400 NLRP1Q9C000 1473 aa20.64■□□□□ 0.89
PRKAB1-203ENST00000537400 SYNMO15061 1565 aa20.63■□□□□ 0.89
PRKAB1-203ENST00000537400 CLSPNQ9HAW4 1339 aa20.63■□□□□ 0.89
PRKAB1-203ENST00000537400 CFAP65Q6ZU64 1925 aaKnown RBP20.61■□□□□ 0.89
PRKAB1-203ENST00000537400 CCDC144AA2RUR9 1427 aa20.61■□□□□ 0.89
PRKAB1-203ENST00000537400 PLPPR3Q6T4P5 718 aa20.6■□□□□ 0.89
PRKAB1-203ENST00000537400 FBXO41Q8TF61 875 aa20.6■□□□□ 0.89
PRKAB1-203ENST00000537400 PIK3C2BO00750 1634 aa20.6■□□□□ 0.89
PRKAB1-203ENST00000537400 IDI1Q13907 227 aa20.57■□□□□ 0.88
PRKAB1-203ENST00000537400 MYO3AQ8NEV4 1616 aa20.56■□□□□ 0.88
PRKAB1-203ENST00000537400 A2ML1A8K2U0 1454 aa20.56■□□□□ 0.88
PRKAB1-203ENST00000537400 UHRF1BP1Q6BDS2 1440 aa20.56■□□□□ 0.88
PRKAB1-203ENST00000537400 CLTCL1P53675 1640 aa20.55■□□□□ 0.88
PRKAB1-203ENST00000537400 KDM5AP29375 1690 aaKnown RBP20.54■□□□□ 0.88
PRKAB1-203ENST00000537400 CCER1Q8TC90 406 aaPredicted RBP20.54■□□□□ 0.88
PRKAB1-203ENST00000537400 NEURL4Q96JN8 1562 aa20.54■□□□□ 0.88
PRKAB1-203ENST00000537400 UGGT1Q9NYU2 1555 aa20.54■□□□□ 0.88
PRKAB1-203ENST00000537400 ZNF142P52746 1687 aaPredicted RBP20.54■□□□□ 0.88
PRKAB1-203ENST00000537400 CEP170BQ9Y4F5 1589 aaPredicted RBP20.52■□□□□ 0.88
PRKAB1-203ENST00000537400 ADGRB3O60242 1522 aa20.51■□□□□ 0.87
PRKAB1-203ENST00000537400 STAG3Q9UJ98 1225 aa20.5■□□□□ 0.87
PRKAB1-203ENST00000537400 THEMISQ8N1K5 641 aaPredicted RBP20.49■□□□□ 0.87
PRKAB1-203ENST00000537400 TMEM131LA2VDJ0 1609 aa20.49■□□□□ 0.87
PRKAB1-203ENST00000537400 KIF1BO60333 1816 aa20.48■□□□□ 0.87
PRKAB1-203ENST00000537400 SPATA31E1Q6ZUB1 1445 aa20.48■□□□□ 0.87
PRKAB1-203ENST00000537400 UBR1Q8IWV7 1749 aa20.47■□□□□ 0.87
PRKAB1-203ENST00000537400 CHGAP10645 457 aaKnown RBP20.45■□□□□ 0.86
PRKAB1-203ENST00000537400 RPGRIP1LQ68CZ1 1315 aa20.45■□□□□ 0.86
PRKAB1-203ENST00000537400 SIN3AQ96ST3 1273 aa20.44■□□□□ 0.86
PRKAB1-203ENST00000537400 TMEM2Q9UHN6 1383 aa20.43■□□□□ 0.86
PRKAB1-203ENST00000537400 SLIT1O75093 1534 aa20.43■□□□□ 0.86
PRKAB1-203ENST00000537400 HDGFP51858 240 aaKnown RBP20.42■□□□□ 0.86
PRKAB1-203ENST00000537400 STAC3Q96MF2 364 aa20.42■□□□□ 0.86
PRKAB1-203ENST00000537400 ARHGAP23Q9P227 1491 aa20.42■□□□□ 0.86
PRKAB1-203ENST00000537400 NEUROD1Q13562 356 aa20.4■□□□□ 0.86
PRKAB1-203ENST00000537400 ZNF326Q5BKZ1 582 aaKnown RBP20.4■□□□□ 0.86
PRKAB1-203ENST00000537400 TIMELESSQ9UNS1 1208 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms