RNA–Protein interactions for RNA: ENST00000537315.5

RFC5-208, Transcript of replication factor C subunit 5, humanhuman

TSL 4

Gene RFC5, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-208ENST00000537315 SHANK2Q9UPX8 1470 aa18.84■□□□□ 0.61
RFC5-208ENST00000537315 NPATQ14207 1427 aa18.84■□□□□ 0.61
RFC5-208ENST00000537315 RSPH4AQ5TD94 716 aa18.84■□□□□ 0.61
RFC5-208ENST00000537315 FAM135AQ9P2D6 1515 aa18.84■□□□□ 0.61
RFC5-208ENST00000537315 CEP170BQ9Y4F5 1589 aaPredicted RBP18.83■□□□□ 0.6
RFC5-208ENST00000537315 PTPRKQ15262 1439 aa18.83■□□□□ 0.6
RFC5-208ENST00000537315 KIF3BO15066 747 aa18.82■□□□□ 0.6
RFC5-208ENST00000537315 TSPY4P0CV99 314 aa18.82■□□□□ 0.6
RFC5-208ENST00000537315 TSPY10P0CW01 314 aa18.82■□□□□ 0.6
RFC5-208ENST00000537315 CFAP65Q6ZU64 1925 aaKnown RBP18.82■□□□□ 0.6
RFC5-208ENST00000537315 ABCC5O15440 1437 aa18.82■□□□□ 0.6
RFC5-208ENST00000537315 DAPK1P53355 1430 aa18.82■□□□□ 0.6
RFC5-208ENST00000537315 CAMSAP1Q5T5Y3 1602 aa18.81■□□□□ 0.6
RFC5-208ENST00000537315 DUOX2Q9NRD8 1548 aa18.8■□□□□ 0.6
RFC5-208ENST00000537315 ABCC3O15438 1527 aa18.79■□□□□ 0.6
RFC5-208ENST00000537315 ILDR1Q86SU0 546 aaPredicted RBP18.78■□□□□ 0.6
RFC5-208ENST00000537315 DEPDC5O75140 1603 aa18.77■□□□□ 0.6
RFC5-208ENST00000537315 POLR1AO95602 1720 aaPredicted RBP18.77■□□□□ 0.59
RFC5-208ENST00000537315 PZPP20742 1482 aa18.77■□□□□ 0.59
RFC5-208ENST00000537315 PRDM15P57071 1507 aaPredicted RBP18.76■□□□□ 0.59
RFC5-208ENST00000537315 KIF15Q9NS87 1388 aa18.76■□□□□ 0.59
RFC5-208ENST00000537315 NCOA1Q15788 1441 aa18.75■□□□□ 0.59
RFC5-208ENST00000537315 PPP6R1Q9UPN7 881 aa18.73■□□□□ 0.59
RFC5-208ENST00000537315 ERBINQ96RT1 1412 aa18.72■□□□□ 0.59
RFC5-208ENST00000537315 WASHC2CQ9Y4E1 1318 aa18.71■□□□□ 0.59
RFC5-208ENST00000537315 A2ML1A8K2U0 1454 aa18.71■□□□□ 0.59
RFC5-208ENST00000537315 TNRQ92752 1358 aa18.69■□□□□ 0.58
RFC5-208ENST00000537315 FBXO31Q5XUX0 539 aaPredicted RBP18.69■□□□□ 0.58
RFC5-208ENST00000537315 SPATA31D1Q6ZQQ2 1576 aa18.68■□□□□ 0.58
RFC5-208ENST00000537315 RRP7BPQ9NSQ0 103 aa18.68■□□□□ 0.58
RFC5-208ENST00000537315 CHIC2Q9UKJ5 165 aa18.68■□□□□ 0.58
RFC5-208ENST00000537315 ADGRL2O95490 1459 aa18.68■□□□□ 0.58
RFC5-208ENST00000537315 PLA2R1Q13018 1463 aa18.67■□□□□ 0.58
RFC5-208ENST00000537315 FAM50AQ14320 339 aaKnown RBP18.67■□□□□ 0.58
RFC5-208ENST00000537315 ERVK-7P63135 1459 aa18.66■□□□□ 0.58
RFC5-208ENST00000537315 ANKRD30AQ9BXX3 1397 aa18.66■□□□□ 0.58
RFC5-208ENST00000537315 PTPRTO14522 1441 aa18.66■□□□□ 0.58
RFC5-208ENST00000537315 PPARGC1BQ86YN6 1023 aaKnown RBP18.65■□□□□ 0.58
RFC5-208ENST00000537315 NEURL4Q96JN8 1562 aa18.64■□□□□ 0.58
RFC5-208ENST00000537315 UBR1Q8IWV7 1749 aa18.63■□□□□ 0.57
RFC5-208ENST00000537315 VWDEQ8N2E2 1590 aa18.63■□□□□ 0.57
RFC5-208ENST00000537315 NCKAP5LQ9HCH0 1330 aa18.62■□□□□ 0.57
RFC5-208ENST00000537315 NLRP1Q9C000 1473 aa18.62■□□□□ 0.57
RFC5-208ENST00000537315 UGGT1Q9NYU2 1555 aa18.62■□□□□ 0.57
RFC5-208ENST00000537315 LTBP4Q8N2S1 1624 aa18.61■□□□□ 0.57
RFC5-208ENST00000537315 DMRT2Q9Y5R5 561 aa18.61■□□□□ 0.57
RFC5-208ENST00000537315 UNC13BO14795 1591 aa18.59■□□□□ 0.57
RFC5-208ENST00000537315 EFCAB6Q5THR3 1501 aa18.59■□□□□ 0.57
RFC5-208ENST00000537315 FBXO41Q8TF61 875 aa18.59■□□□□ 0.57
RFC5-208ENST00000537315 GCC2Q8IWJ2 1684 aa18.58■□□□□ 0.57
RFC5-208ENST00000537315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.58■□□□□ 0.567e-7■■□□□ 12.5
RFC5-208ENST00000537315 PIK3C2BO00750 1634 aa18.58■□□□□ 0.56
RFC5-208ENST00000537315 LMTK2Q8IWU2 1503 aa18.58■□□□□ 0.56
RFC5-208ENST00000537315 CERKQ8TCT0 537 aa18.57■□□□□ 0.56
RFC5-208ENST00000537315 IQGAP1P46940 1657 aa18.57■□□□□ 0.56
RFC5-208ENST00000537315 TET3O43151 1660 aa18.56■□□□□ 0.56
RFC5-208ENST00000537315 SYNMO15061 1565 aa18.55■□□□□ 0.56
RFC5-208ENST00000537315 MYO5BQ9ULV0 1848 aa18.55■□□□□ 0.56
RFC5-208ENST00000537315 ARHGAP31Q2M1Z3 1444 aa18.55■□□□□ 0.56
RFC5-208ENST00000537315 ANKRD50Q9ULJ7 1429 aa18.55■□□□□ 0.56
RFC5-208ENST00000537315 KANK1Q14678 1352 aa18.55■□□□□ 0.56
RFC5-208ENST00000537315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.55■□□□□ 0.56
RFC5-208ENST00000537315 PKD2Q13563 968 aa18.52■□□□□ 0.56
RFC5-208ENST00000537315 E9PCH4 1651 aa18.51■□□□□ 0.55
RFC5-208ENST00000537315 IQGAP3Q86VI3 1631 aa18.51■□□□□ 0.55
RFC5-208ENST00000537315 ZNF335Q9H4Z2 1342 aaPredicted RBP18.5■□□□□ 0.55
RFC5-208ENST00000537315 KDM5AP29375 1690 aaKnown RBP18.5■□□□□ 0.55
RFC5-208ENST00000537315 ITGAEP38570 1179 aa18.49■□□□□ 0.55
RFC5-208ENST00000537315 STRCP1A6NGW2 1772 aa18.49■□□□□ 0.55
RFC5-208ENST00000537315 ROCK1Q13464 1354 aa18.47■□□□□ 0.55
RFC5-208ENST00000537315 NPHP4O75161 1426 aaPredicted RBP18.46■□□□□ 0.55
RFC5-208ENST00000537315 RRBP1Q9P2E9 1410 aaKnown RBP18.46■□□□□ 0.55
RFC5-208ENST00000537315 MED14O60244 1454 aa18.46■□□□□ 0.54
RFC5-208ENST00000537315 ADGRB3O60242 1522 aa18.45■□□□□ 0.54
RFC5-208ENST00000537315 THEMISQ8N1K5 641 aaPredicted RBP18.45■□□□□ 0.54
RFC5-208ENST00000537315 IQSEC2Q5JU85 1478 aa18.45■□□□□ 0.54
RFC5-208ENST00000537315 SLIT1O75093 1534 aa18.44■□□□□ 0.54
RFC5-208ENST00000537315 NOS1P29475 1434 aa18.43■□□□□ 0.54
RFC5-208ENST00000537315 SCAF11Q99590 1463 aaKnown RBP18.43■□□□□ 0.54
RFC5-208ENST00000537315 ARHGAP23Q9P227 1491 aa18.43■□□□□ 0.54
RFC5-208ENST00000537315 RPRD2Q5VT52 1461 aaKnown RBP18.42■□□□□ 0.54
RFC5-208ENST00000537315 ANKLE2Q86XL3 938 aa18.42■□□□□ 0.54
RFC5-208ENST00000537315 SPHKAPQ2M3C7 1700 aa18.4■□□□□ 0.54
RFC5-208ENST00000537315 CPS1P31327 1500 aa18.39■□□□□ 0.54
RFC5-208ENST00000537315 TMEM131LA2VDJ0 1609 aa18.38■□□□□ 0.53
RFC5-208ENST00000537315 XIRP1Q702N8 1843 aaKnown RBP18.37■□□□□ 0.53
RFC5-208ENST00000537315 TMEM2Q9UHN6 1383 aa18.34■□□□□ 0.53
RFC5-208ENST00000537315 LTKP29376 864 aa18.34■□□□□ 0.53
RFC5-208ENST00000537315 IDI1Q13907 227 aa18.34■□□□□ 0.53
RFC5-208ENST00000537315 STAG3Q9UJ98 1225 aa18.33■□□□□ 0.52
RFC5-208ENST00000537315 NUP155O75694 1391 aa18.32■□□□□ 0.52
RFC5-208ENST00000537315 NAIPQ13075 1403 aa18.32■□□□□ 0.52
RFC5-208ENST00000537315 TXNDC2Q86VQ3 553 aa18.3■□□□□ 0.52
RFC5-208ENST00000537315 ALKQ9UM73 1620 aa18.29■□□□□ 0.52
RFC5-208ENST00000537315 CLTCL1P53675 1640 aa18.28■□□□□ 0.52
RFC5-208ENST00000537315 LRRC7Q96NW7 1537 aa18.28■□□□□ 0.52
RFC5-208ENST00000537315 ZFYVE9O95405 1425 aa18.27■□□□□ 0.52
RFC5-208ENST00000537315 FOXD1Q16676 465 aa18.27■□□□□ 0.52
RFC5-208ENST00000537315 EID1Q9Y6B2 187 aa18.27■□□□□ 0.52
RFC5-208ENST00000537315 KIF1BO60333 1816 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms