RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 A2MP01023 1474 aa16.38■□□□□ 0.21
CPSF7-217ENST00000537162 LRRIQ1Q96JM4 1722 aa16.38■□□□□ 0.21
CPSF7-217ENST00000537162 LRP6O75581 1613 aa16.37■□□□□ 0.21
CPSF7-217ENST00000537162 UGGT1Q9NYU2 1555 aa16.37■□□□□ 0.21
CPSF7-217ENST00000537162 ATP7AQ04656 1500 aa16.36■□□□□ 0.21
CPSF7-217ENST00000537162 SETBP1Q9Y6X0 1596 aa16.36■□□□□ 0.21
CPSF7-217ENST00000537162 INO80Q9ULG1 1556 aaPredicted RBP16.35■□□□□ 0.21
CPSF7-217ENST00000537162 THEMISQ8N1K5 641 aaPredicted RBP16.35■□□□□ 0.21
CPSF7-217ENST00000537162 CDC42BPAQ5VT25 1732 aa16.35■□□□□ 0.21
CPSF7-217ENST00000537162 SPAG9O60271 1321 aaKnown RBP16.35■□□□□ 0.21
CPSF7-217ENST00000537162 SYCP2Q9BX26 1530 aa16.35■□□□□ 0.21
CPSF7-217ENST00000537162 PHLPP1O60346 1717 aa16.33■□□□□ 0.21
CPSF7-217ENST00000537162 FAM135AQ9P2D6 1515 aa16.32■□□□□ 0.2
CPSF7-217ENST00000537162 CDK11AQ9UQ88 783 aaPredicted RBP16.32■□□□□ 0.2
CPSF7-217ENST00000537162 PZPP20742 1482 aa16.31■□□□□ 0.2
CPSF7-217ENST00000537162 CLIP1P30622 1438 aa16.31■□□□□ 0.2
CPSF7-217ENST00000537162 HNRNPMP52272 730 aaKnown RBP eCLIP16.3■□□□□ 0.2
CPSF7-217ENST00000537162 JCADQ9P266 1359 aa16.29■□□□□ 0.2
CPSF7-217ENST00000537162 RXRBP28702 533 aa16.29■□□□□ 0.2
CPSF7-217ENST00000537162 ZNF772Q68DY9 489 aaPredicted RBP16.29■□□□□ 0.2
CPSF7-217ENST00000537162 NLRP1Q9C000 1473 aa16.29■□□□□ 0.2
CPSF7-217ENST00000537162 MIA2Q96PC5 1412 aa16.28■□□□□ 0.2
CPSF7-217ENST00000537162 ZNF777Q9ULD5 760 aaPredicted RBP16.28■□□□□ 0.2
CPSF7-217ENST00000537162 CDK12Q9NYV4 1490 aaPredicted RBP16.27■□□□□ 0.19
CPSF7-217ENST00000537162 ADGBQ8N7X0 1667 aa16.27■□□□□ 0.19
CPSF7-217ENST00000537162 CSRNP3Q8WYN3 585 aa16.26■□□□□ 0.19
CPSF7-217ENST00000537162 COL16A1Q07092 1604 aaPredicted RBP16.26■□□□□ 0.19
CPSF7-217ENST00000537162 MAP3K1Q13233 1512 aa16.25■□□□□ 0.19
CPSF7-217ENST00000537162 RBM33Q96EV2 1170 aaKnown RBP16.25■□□□□ 0.19
CPSF7-217ENST00000537162 MEX3CQ5U5Q3 659 aaKnown RBP16.24■□□□□ 0.19
CPSF7-217ENST00000537162 TMEM94Q12767 1356 aa16.24■□□□□ 0.19
CPSF7-217ENST00000537162 KDM5DQ9BY66 1539 aa16.24■□□□□ 0.19
CPSF7-217ENST00000537162 RGS12O14924 1447 aa16.23■□□□□ 0.19
CPSF7-217ENST00000537162 ZRANB1Q9UGI0 708 aa16.21■□□□□ 0.19
CPSF7-217ENST00000537162 LTKP29376 864 aa16.19■□□□□ 0.18
CPSF7-217ENST00000537162 UBR1Q8IWV7 1749 aa16.19■□□□□ 0.18
CPSF7-217ENST00000537162 FMN1Q68DA7 1419 aa16.19■□□□□ 0.18
CPSF7-217ENST00000537162 LRRC9Q6ZRR7 1453 aa16.18■□□□□ 0.18
CPSF7-217ENST00000537162 SCAF11Q99590 1463 aaKnown RBP16.18■□□□□ 0.18
CPSF7-217ENST00000537162 SPATA31A6Q5VVP1 1343 aa16.18■□□□□ 0.18
CPSF7-217ENST00000537162 SHPRHQ149N8 1683 aa16.16■□□□□ 0.18
CPSF7-217ENST00000537162 NUTM2BA6NNL0 878 aaPredicted RBP16.15■□□□□ 0.18
CPSF7-217ENST00000537162 NUTM2EB1AL46 878 aaPredicted RBP16.15■□□□□ 0.18
CPSF7-217ENST00000537162 NUTM2DQ5VT03 806 aaPredicted RBP16.15■□□□□ 0.18
CPSF7-217ENST00000537162 NUTM2AQ8IVF1 878 aaPredicted RBP16.15■□□□□ 0.18
CPSF7-217ENST00000537162 GPATCH8Q9UKJ3 1502 aaKnown RBP16.14■□□□□ 0.18
CPSF7-217ENST00000537162 KIF3BO15066 747 aa16.14■□□□□ 0.17
CPSF7-217ENST00000537162 SLAIN2Q9P270 581 aa16.14■□□□□ 0.17
CPSF7-217ENST00000537162 NCOA2Q15596 1464 aa16.14■□□□□ 0.17
CPSF7-217ENST00000537162 WASHC2CQ9Y4E1 1318 aa16.14■□□□□ 0.17
CPSF7-217ENST00000537162 KIAA1107Q9UPP5 1409 aa16.13■□□□□ 0.17
CPSF7-217ENST00000537162 ARHGAP35Q9NRY4 1499 aa16.13■□□□□ 0.17
CPSF7-217ENST00000537162 AFF2P51816 1311 aa16.13■□□□□ 0.17
CPSF7-217ENST00000537162 DHX29Q7Z478 1369 aaKnown RBP16.13■□□□□ 0.17
CPSF7-217ENST00000537162 FGD6Q6ZV73 1430 aa16.12■□□□□ 0.17
CPSF7-217ENST00000537162 TIAM1Q13009 1591 aa16.12■□□□□ 0.17
CPSF7-217ENST00000537162 ARHGAP23Q9P227 1491 aa16.11■□□□□ 0.17
CPSF7-217ENST00000537162 TXNDC2Q86VQ3 553 aa16.11■□□□□ 0.17
CPSF7-217ENST00000537162 PROSER2Q86WR7 435 aaPredicted RBP16.11■□□□□ 0.17
CPSF7-217ENST00000537162 SLIT1O75093 1534 aa16.09■□□□□ 0.17
CPSF7-217ENST00000537162 PRDM15P57071 1507 aaPredicted RBP16.09■□□□□ 0.17
CPSF7-217ENST00000537162 KCNA6P17658 529 aa16.07■□□□□ 0.16
CPSF7-217ENST00000537162 ERVK-7P63135 1459 aa16.07■□□□□ 0.16
CPSF7-217ENST00000537162 DIP2AQ14689 1571 aa16.07■□□□□ 0.16
CPSF7-217ENST00000537162 LRP5O75197 1615 aa16.07■□□□□ 0.16
CPSF7-217ENST00000537162 CFAP65Q6ZU64 1925 aaKnown RBP16.07■□□□□ 0.16
CPSF7-217ENST00000537162 PLEKHH2Q8IVE3 1493 aa16.06■□□□□ 0.16
CPSF7-217ENST00000537162 ATAD2Q6PL18 1390 aa16.06■□□□□ 0.16
CPSF7-217ENST00000537162 QTRT2Q9H974 415 aaKnown RBP16.06■□□□□ 0.16
CPSF7-217ENST00000537162 MSH6P52701 1360 aa16.05■□□□□ 0.16
CPSF7-217ENST00000537162 EP400Q96L91 3159 aa16.05■□□□□ 0.16
CPSF7-217ENST00000537162 ZNF644Q9H582 1327 aaPredicted RBP16.05■□□□□ 0.16
CPSF7-217ENST00000537162 RBM6P78332 1123 aaKnown RBP16.05■□□□□ 0.16
CPSF7-217ENST00000537162 AHDC1Q5TGY3 1603 aaPredicted RBP16.05■□□□□ 0.16
CPSF7-217ENST00000537162 KDM5AP29375 1690 aaKnown RBP16.04■□□□□ 0.16
CPSF7-217ENST00000537162 MBD5Q9P267 1494 aa16.03■□□□□ 0.16
CPSF7-217ENST00000537162 CFDP1Q9UEE9 299 aaPredicted RBP16.03■□□□□ 0.16
CPSF7-217ENST00000537162 NWD1Q149M9 1564 aa16.03■□□□□ 0.16
CPSF7-217ENST00000537162 FOXD1Q16676 465 aa16.02■□□□□ 0.16
CPSF7-217ENST00000537162 SLC26A8Q96RN1 970 aa16.02■□□□□ 0.16
CPSF7-217ENST00000537162 RTEL1-TNFRSF6BF6WH68 1400 aa16.02■□□□□ 0.15
CPSF7-217ENST00000537162 TET3O43151 1660 aa16.02■□□□□ 0.15
CPSF7-217ENST00000537162 ABCC3O15438 1527 aa16.01■□□□□ 0.15
CPSF7-217ENST00000537162 NKTRP30414 1462 aaKnown RBP16■□□□□ 0.15
CPSF7-217ENST00000537162 CCDC18Q5T9S5 1454 aa16■□□□□ 0.15
CPSF7-217ENST00000537162 IFFO2Q5TF58 517 aa15.99■□□□□ 0.15
CPSF7-217ENST00000537162 EHMT2Q96KQ7 1210 aa15.99■□□□□ 0.15
CPSF7-217ENST00000537162 C8orf37Q96NL8 207 aa15.98■□□□□ 0.15
CPSF7-217ENST00000537162 EID1Q9Y6B2 187 aa15.98■□□□□ 0.15
CPSF7-217ENST00000537162 MAST1Q9Y2H9 1570 aa15.97■□□□□ 0.15
CPSF7-217ENST00000537162 PIK3C2BO00750 1634 aa15.97■□□□□ 0.15
CPSF7-217ENST00000537162 CEP152O94986 1710 aa15.97■□□□□ 0.15
CPSF7-217ENST00000537162 TMEM2Q9UHN6 1383 aa15.95■□□□□ 0.14
CPSF7-217ENST00000537162 CASKIN1Q8WXD9 1431 aa15.94■□□□□ 0.14
CPSF7-217ENST00000537162 CCNB3Q8WWL7 1395 aa15.94■□□□□ 0.14
CPSF7-217ENST00000537162 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.92■□□□□ 0.14
CPSF7-217ENST00000537162 MROH1Q8NDA8 1641 aa15.92■□□□□ 0.14
CPSF7-217ENST00000537162 CAMSAP2Q08AD1 1489 aa15.91■□□□□ 0.14
CPSF7-217ENST00000537162 CHD2O14647 1828 aaKnown RBP15.91■□□□□ 0.14
CPSF7-217ENST00000537162 NGLY1Q96IV0 654 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms