RNA–Protein interactions for RNA: ENST00000536509.5

LMO3-214, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-214ENST00000536509 CEP170BQ9Y4F5 1589 aaPredicted RBP17.82■□□□□ 0.44
LMO3-214ENST00000536509 RSPH4AQ5TD94 716 aa17.8■□□□□ 0.44
LMO3-214ENST00000536509 FAM135AQ9P2D6 1515 aa17.8■□□□□ 0.44
LMO3-214ENST00000536509 DHX29Q7Z478 1369 aaKnown RBP17.79■□□□□ 0.44
LMO3-214ENST00000536509 ZNF644Q9H582 1327 aaPredicted RBP17.77■□□□□ 0.44
LMO3-214ENST00000536509 TCOF1Q13428 1488 aaKnown RBP17.77■□□□□ 0.44
LMO3-214ENST00000536509 CCDC141Q6ZP82 1450 aa17.76■□□□□ 0.43
LMO3-214ENST00000536509 DISP3Q9P2K9 1392 aa17.76■□□□□ 0.43
LMO3-214ENST00000536509 NCKAP5LQ9HCH0 1330 aa17.75■□□□□ 0.43
LMO3-214ENST00000536509 A2ML1A8K2U0 1454 aa17.75■□□□□ 0.43
LMO3-214ENST00000536509 RNF216Q9NWF9 866 aaPredicted RBP17.74■□□□□ 0.43
LMO3-214ENST00000536509 NCOA2Q15596 1464 aa17.74■□□□□ 0.43
LMO3-214ENST00000536509 CAMSAP2Q08AD1 1489 aa17.73■□□□□ 0.43
LMO3-214ENST00000536509 KDM5DQ9BY66 1539 aa17.72■□□□□ 0.43
LMO3-214ENST00000536509 DNMT1P26358 1616 aaKnown RBP17.72■□□□□ 0.43
LMO3-214ENST00000536509 ARHGEF5Q12774 1597 aa17.71■□□□□ 0.43
LMO3-214ENST00000536509 POLR1AO95602 1720 aaPredicted RBP17.71■□□□□ 0.43
LMO3-214ENST00000536509 ZNF335Q9H4Z2 1342 aaPredicted RBP17.71■□□□□ 0.42
LMO3-214ENST00000536509 SPATA31D1Q6ZQQ2 1576 aa17.7■□□□□ 0.42
LMO3-214ENST00000536509 PZPP20742 1482 aa17.7■□□□□ 0.42
LMO3-214ENST00000536509 KIF3BO15066 747 aa17.7■□□□□ 0.42
LMO3-214ENST00000536509 TNRQ92752 1358 aa17.68■□□□□ 0.42
LMO3-214ENST00000536509 TSPY4P0CV99 314 aa17.68■□□□□ 0.42
LMO3-214ENST00000536509 TSPY10P0CW01 314 aa17.68■□□□□ 0.42
LMO3-214ENST00000536509 WASHC2CQ9Y4E1 1318 aa17.68■□□□□ 0.42
LMO3-214ENST00000536509 NLRP1Q9C000 1473 aa17.65■□□□□ 0.42
LMO3-214ENST00000536509 UBAP1LF5GYI3 381 aa17.65■□□□□ 0.42
LMO3-214ENST00000536509 CPS1P31327 1500 aa17.64■□□□□ 0.41
LMO3-214ENST00000536509 SOCS7O14512 581 aa17.64■□□□□ 0.41
LMO3-214ENST00000536509 ZC3H13Q5T200 1668 aaKnown RBP17.64■□□□□ 0.41
LMO3-214ENST00000536509 LRRC9Q6ZRR7 1453 aa17.63■□□□□ 0.41
LMO3-214ENST00000536509 MAST1Q9Y2H9 1570 aa17.63■□□□□ 0.41
LMO3-214ENST00000536509 RNF17Q9BXT8 1623 aaKnown RBP17.63■□□□□ 0.41
LMO3-214ENST00000536509 THEMISQ8N1K5 641 aaPredicted RBP17.63■□□□□ 0.41
LMO3-214ENST00000536509 VPS8Q8N3P4 1428 aa17.63■□□□□ 0.41
LMO3-214ENST00000536509 MIA2Q96PC5 1412 aa17.63■□□□□ 0.41
LMO3-214ENST00000536509 FBXO31Q5XUX0 539 aaPredicted RBP17.62■□□□□ 0.41
LMO3-214ENST00000536509 ILDR2Q71H61 639 aa17.62■□□□□ 0.41
LMO3-214ENST00000536509 ANKLE2Q86XL3 938 aa17.62■□□□□ 0.41
LMO3-214ENST00000536509 MAP3K1Q13233 1512 aa17.62■□□□□ 0.41
LMO3-214ENST00000536509 NEURL4Q96JN8 1562 aa17.62■□□□□ 0.41
LMO3-214ENST00000536509 EIF2AK4Q9P2K8 1649 aaKnown RBP17.61■□□□□ 0.41
LMO3-214ENST00000536509 DEPDC5O75140 1603 aa17.61■□□□□ 0.41
LMO3-214ENST00000536509 UGGT1Q9NYU2 1555 aa17.6■□□□□ 0.41
LMO3-214ENST00000536509 MED14O60244 1454 aa17.58■□□□□ 0.41
LMO3-214ENST00000536509 SHANK2Q9UPX8 1470 aa17.58■□□□□ 0.41
LMO3-214ENST00000536509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.56■□□□□ 0.4
LMO3-214ENST00000536509 TOM1O60784 492 aa17.56■□□□□ 0.4
LMO3-214ENST00000536509 ABCC3O15438 1527 aa17.56■□□□□ 0.4
LMO3-214ENST00000536509 HOXD11P31277 338 aaPredicted RBP17.55■□□□□ 0.4
LMO3-214ENST00000536509 MYOM3Q5VTT5 1437 aa17.55■□□□□ 0.4
LMO3-214ENST00000536509 IQGAP1P46940 1657 aa17.55■□□□□ 0.4
LMO3-214ENST00000536509 NPHP4O75161 1426 aaPredicted RBP17.54■□□□□ 0.4
LMO3-214ENST00000536509 VWDEQ8N2E2 1590 aa17.53■□□□□ 0.4
LMO3-214ENST00000536509 DUOX2Q9NRD8 1548 aa17.52■□□□□ 0.4
LMO3-214ENST00000536509 ERVK-7P63135 1459 aa17.51■□□□□ 0.39
LMO3-214ENST00000536509 MROH1Q8NDA8 1641 aa17.5■□□□□ 0.39
LMO3-214ENST00000536509 CEP152O94986 1710 aa17.5■□□□□ 0.39
LMO3-214ENST00000536509 CFAP65Q6ZU64 1925 aaKnown RBP17.49■□□□□ 0.39
LMO3-214ENST00000536509 UBR1Q8IWV7 1749 aa17.48■□□□□ 0.39
LMO3-214ENST00000536509 ZBTB22O15209 634 aa17.48■□□□□ 0.39
LMO3-214ENST00000536509 KANK4Q5T7N3 995 aaPredicted RBP17.48■□□□□ 0.39
LMO3-214ENST00000536509 CROCC2H7BZ55 1655 aa17.48■□□□□ 0.39
LMO3-214ENST00000536509 PIP4K2BP78356 416 aa17.47■□□□□ 0.39
LMO3-214ENST00000536509 SYNMO15061 1565 aa17.47■□□□□ 0.39
LMO3-214ENST00000536509 PRDM15P57071 1507 aaPredicted RBP17.47■□□□□ 0.39
LMO3-214ENST00000536509 ARHGAP31Q2M1Z3 1444 aa17.47■□□□□ 0.39
LMO3-214ENST00000536509 ERBINQ96RT1 1412 aa17.47■□□□□ 0.39
LMO3-214ENST00000536509 LOC105371045A0A1W2PR82 267 aa17.45■□□□□ 0.38
LMO3-214ENST00000536509 HSPA1LP34931 641 aa17.45■□□□□ 0.38
LMO3-214ENST00000536509 KIF15Q9NS87 1388 aa17.44■□□□□ 0.38
LMO3-214ENST00000536509 APLP2Q06481 763 aa17.44■□□□□ 0.38
LMO3-214ENST00000536509 PTPN23Q9H3S7 1636 aa17.43■□□□□ 0.38
LMO3-214ENST00000536509 SCAF11Q99590 1463 aaKnown RBP17.43■□□□□ 0.38
LMO3-214ENST00000536509 STRCP1A6NGW2 1772 aa17.43■□□□□ 0.38
LMO3-214ENST00000536509 SLIT1O75093 1534 aa17.42■□□□□ 0.38
LMO3-214ENST00000536509 MED1Q15648 1581 aaPredicted RBP17.42■□□□□ 0.38
LMO3-214ENST00000536509 KDM5AP29375 1690 aaKnown RBP17.42■□□□□ 0.38
LMO3-214ENST00000536509 LRRC7Q96NW7 1537 aa17.42■□□□□ 0.38
LMO3-214ENST00000536509 ARHGAP23Q9P227 1491 aa17.41■□□□□ 0.38
LMO3-214ENST00000536509 KANK1Q14678 1352 aa17.4■□□□□ 0.38
LMO3-214ENST00000536509 ABCC5O15440 1437 aa17.4■□□□□ 0.38
LMO3-214ENST00000536509 ALKQ9UM73 1620 aa17.39■□□□□ 0.38
LMO3-214ENST00000536509 EID1Q9Y6B2 187 aa17.39■□□□□ 0.37
LMO3-214ENST00000536509 DAPK1P53355 1430 aa17.38■□□□□ 0.37
LMO3-214ENST00000536509 RRP7BPQ9NSQ0 103 aa17.38■□□□□ 0.37
LMO3-214ENST00000536509 TXNDC2Q86VQ3 553 aa17.37■□□□□ 0.37
LMO3-214ENST00000536509 ANKRD30AQ9BXX3 1397 aa17.36■□□□□ 0.37
LMO3-214ENST00000536509 FGD6Q6ZV73 1430 aa17.36■□□□□ 0.37
LMO3-214ENST00000536509 PIK3C2BO00750 1634 aa17.36■□□□□ 0.37
LMO3-214ENST00000536509 LMTK2Q8IWU2 1503 aa17.35■□□□□ 0.37
LMO3-214ENST00000536509 LTKP29376 864 aa17.34■□□□□ 0.37
LMO3-214ENST00000536509 TMEM2Q9UHN6 1383 aa17.33■□□□□ 0.36
LMO3-214ENST00000536509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.33■□□□□ 0.36
LMO3-214ENST00000536509 STAG3Q9UJ98 1225 aa17.33■□□□□ 0.36
LMO3-214ENST00000536509 EFCAB6Q5THR3 1501 aa17.32■□□□□ 0.36
LMO3-214ENST00000536509 XIRP1Q702N8 1843 aaKnown RBP17.32■□□□□ 0.36
LMO3-214ENST00000536509 FOXD4L1Q9NU39 408 aa17.29■□□□□ 0.36
LMO3-214ENST00000536509 ADGRL2O95490 1459 aa17.28■□□□□ 0.36
LMO3-214ENST00000536509 IDI1Q13907 227 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms