RNA–Protein interactions for RNA: ENST00000536034.1

LINC02449-203, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 451 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-203ENST00000536034 MROH2AA6NES4 1674 aa23.06■■□□□ 1.28
LINC02449-203ENST00000536034 RNF17Q9BXT8 1623 aaKnown RBP23.05■■□□□ 1.28
LINC02449-203ENST00000536034 ROCK1Q13464 1354 aa23.03■■□□□ 1.28
LINC02449-203ENST00000536034 PTPRKQ15262 1439 aa23.03■■□□□ 1.28
LINC02449-203ENST00000536034 C3P01024 1663 aa23.01■■□□□ 1.27
LINC02449-203ENST00000536034 CEBPAP49715 358 aaPredicted RBP23.01■■□□□ 1.27
LINC02449-203ENST00000536034 KDM5DQ9BY66 1539 aa23.01■■□□□ 1.27
LINC02449-203ENST00000536034 ZMYM3Q14202 1370 aa23.01■■□□□ 1.27
LINC02449-203ENST00000536034 CLTCQ00610 1675 aaKnown RBP23■■□□□ 1.27
LINC02449-203ENST00000536034 PLPPR3Q6T4P5 718 aa22.99■■□□□ 1.27
LINC02449-203ENST00000536034 WASHC2CQ9Y4E1 1318 aa22.98■■□□□ 1.27
LINC02449-203ENST00000536034 NPATQ14207 1427 aa22.97■■□□□ 1.27
LINC02449-203ENST00000536034 ITGAEP38570 1179 aa22.96■■□□□ 1.27
LINC02449-203ENST00000536034 MROH1Q8NDA8 1641 aa22.96■■□□□ 1.27
LINC02449-203ENST00000536034 PRDM15P57071 1507 aaPredicted RBP22.95■■□□□ 1.26
LINC02449-203ENST00000536034 ZC3H13Q5T200 1668 aaKnown RBP22.95■■□□□ 1.26
LINC02449-203ENST00000536034 ANKRD50Q9ULJ7 1429 aa22.95■■□□□ 1.26
LINC02449-203ENST00000536034 DEPDC5O75140 1603 aa22.94■■□□□ 1.26
LINC02449-203ENST00000536034 ABCC3O15438 1527 aa22.92■■□□□ 1.26
LINC02449-203ENST00000536034 LMTK3Q96Q04 1460 aa22.92■■□□□ 1.26
LINC02449-203ENST00000536034 KANK1Q14678 1352 aa22.91■■□□□ 1.26
LINC02449-203ENST00000536034 PREX1Q8TCU6 1659 aa22.91■■□□□ 1.26
LINC02449-203ENST00000536034 SETD1BQ9UPS6 1966 aaKnown RBP22.9■■□□□ 1.26
LINC02449-203ENST00000536034 PZPP20742 1482 aa22.9■■□□□ 1.26
LINC02449-203ENST00000536034 UHRF1BP1Q6BDS2 1440 aa22.89■■□□□ 1.25
LINC02449-203ENST00000536034 VWDEQ8N2E2 1590 aa22.86■■□□□ 1.25
LINC02449-203ENST00000536034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.86■■□□□ 1.25
LINC02449-203ENST00000536034 LMTK2Q8IWU2 1503 aa22.84■■□□□ 1.25
LINC02449-203ENST00000536034 ARHGAP31Q2M1Z3 1444 aa22.83■■□□□ 1.25
LINC02449-203ENST00000536034 CEP152O94986 1710 aa22.83■■□□□ 1.25
LINC02449-203ENST00000536034 CAMSAP1Q5T5Y3 1602 aa22.82■■□□□ 1.24
LINC02449-203ENST00000536034 UNC13BO14795 1591 aa22.81■■□□□ 1.24
LINC02449-203ENST00000536034 FBXO31Q5XUX0 539 aaPredicted RBP22.8■■□□□ 1.24
LINC02449-203ENST00000536034 NAIPQ13075 1403 aa22.8■■□□□ 1.24
LINC02449-203ENST00000536034 TNRQ92752 1358 aa22.79■■□□□ 1.24
LINC02449-203ENST00000536034 HFM1A2PYH4 1435 aa22.79■■□□□ 1.24
LINC02449-203ENST00000536034 SPATA31D1Q6ZQQ2 1576 aa22.77■■□□□ 1.24
LINC02449-203ENST00000536034 MYO3AQ8NEV4 1616 aa22.77■■□□□ 1.24
LINC02449-203ENST00000536034 GCC2Q8IWJ2 1684 aa22.77■■□□□ 1.24
LINC02449-203ENST00000536034 HSPA2P54652 639 aa22.76■■□□□ 1.23
LINC02449-203ENST00000536034 ERVK-7P63135 1459 aa22.76■■□□□ 1.23
LINC02449-203ENST00000536034 ZNF142P52746 1687 aaPredicted RBP22.75■■□□□ 1.23
LINC02449-203ENST00000536034 EFCAB6Q5THR3 1501 aa22.75■■□□□ 1.23
LINC02449-203ENST00000536034 NLRP1Q9C000 1473 aa22.74■■□□□ 1.23
LINC02449-203ENST00000536034 CEP170BQ9Y4F5 1589 aaPredicted RBP22.74■■□□□ 1.23
LINC02449-203ENST00000536034 A2ML1A8K2U0 1454 aa22.73■■□□□ 1.23
LINC02449-203ENST00000536034 NUP155O75694 1391 aa22.72■■□□□ 1.23
LINC02449-203ENST00000536034 RPRD2Q5VT52 1461 aaKnown RBP22.72■■□□□ 1.23
LINC02449-203ENST00000536034 IQGAP3Q86VI3 1631 aa22.71■■□□□ 1.23
LINC02449-203ENST00000536034 TET3O43151 1660 aa22.71■■□□□ 1.23
LINC02449-203ENST00000536034 NOS1P29475 1434 aa22.65■■□□□ 1.22
LINC02449-203ENST00000536034 PLA2R1Q13018 1463 aa22.65■■□□□ 1.22
LINC02449-203ENST00000536034 UGGT1Q9NYU2 1555 aa22.63■■□□□ 1.21
LINC02449-203ENST00000536034 ACIN1Q9UKV3 1341 aaKnown RBP22.62■■□□□ 1.21
LINC02449-203ENST00000536034 THEMISQ8N1K5 641 aaPredicted RBP22.62■■□□□ 1.21
LINC02449-203ENST00000536034 DMRT2Q9Y5R5 561 aa22.62■■□□□ 1.21
LINC02449-203ENST00000536034 CFAP65Q6ZU64 1925 aaKnown RBP22.6■■□□□ 1.21
LINC02449-203ENST00000536034 STRCQ7RTU9 1775 aa22.6■■□□□ 1.21
LINC02449-203ENST00000536034 SYNMO15061 1565 aa22.59■■□□□ 1.21
LINC02449-203ENST00000536034 E9PCH4 1651 aa22.59■■□□□ 1.21
LINC02449-203ENST00000536034 PKD2Q13563 968 aa22.59■■□□□ 1.21
LINC02449-203ENST00000536034 SLC52A1Q9NWF4 448 aa22.59■■□□□ 1.21
LINC02449-203ENST00000536034 SETD5Q9C0A6 1442 aa22.58■■□□□ 1.21
LINC02449-203ENST00000536034 TRIM52Q96A61 297 aa22.57■■□□□ 1.2
LINC02449-203ENST00000536034 PTPRTO14522 1441 aa22.57■■□□□ 1.2
LINC02449-203ENST00000536034 IDI1Q13907 227 aa22.55■■□□□ 1.2
LINC02449-203ENST00000536034 KDM5AP29375 1690 aaKnown RBP22.55■■□□□ 1.2
LINC02449-203ENST00000536034 UBR1Q8IWV7 1749 aa22.54■■□□□ 1.2
LINC02449-203ENST00000536034 PIK3C2BO00750 1634 aa22.53■■□□□ 1.2
LINC02449-203ENST00000536034 ANKLE2Q86XL3 938 aa22.52■■□□□ 1.2
LINC02449-203ENST00000536034 NCKAP5LQ9HCH0 1330 aa22.52■■□□□ 1.2
LINC02449-203ENST00000536034 SLC4A1APQ9BWU0 796 aaKnown RBP22.5■■□□□ 1.19
LINC02449-203ENST00000536034 STAG3Q9UJ98 1225 aa22.5■■□□□ 1.19
LINC02449-203ENST00000536034 ADGRB3O60242 1522 aa22.49■■□□□ 1.19
LINC02449-203ENST00000536034 ARHGAP23Q9P227 1491 aa22.48■■□□□ 1.19
LINC02449-203ENST00000536034 SLIT1O75093 1534 aa22.48■■□□□ 1.19
LINC02449-203ENST00000536034 RAB3GAP2Q9H2M9 1393 aa22.48■■□□□ 1.19
LINC02449-203ENST00000536034 HRCP23327 699 aa22.47■■□□□ 1.19
LINC02449-203ENST00000536034 POLR1AO95602 1720 aaPredicted RBP22.47■■□□□ 1.19
LINC02449-203ENST00000536034 SPHKAPQ2M3C7 1700 aa22.46■■□□□ 1.19
LINC02449-203ENST00000536034 MED14O60244 1454 aa22.46■■□□□ 1.19
LINC02449-203ENST00000536034 TMEM2Q9UHN6 1383 aa22.45■■□□□ 1.18
LINC02449-203ENST00000536034 NEURL4Q96JN8 1562 aa22.45■■□□□ 1.18
LINC02449-203ENST00000536034 TRPM2O94759 1503 aa22.43■■□□□ 1.18
LINC02449-203ENST00000536034 EID1Q9Y6B2 187 aa22.43■■□□□ 1.18
LINC02449-203ENST00000536034 SCAF11Q99590 1463 aaKnown RBP22.42■■□□□ 1.18
LINC02449-203ENST00000536034 MPHOSPH9Q99550 1183 aa22.42■■□□□ 1.18
LINC02449-203ENST00000536034 TMEM131LA2VDJ0 1609 aa22.42■■□□□ 1.18
LINC02449-203ENST00000536034 NPHP4O75161 1426 aaPredicted RBP22.4■■□□□ 1.18
LINC02449-203ENST00000536034 TXNDC2Q86VQ3 553 aa22.4■■□□□ 1.18
LINC02449-203ENST00000536034 LTKP29376 864 aa22.38■■□□□ 1.17
LINC02449-203ENST00000536034 HDGFP51858 240 aaKnown RBP22.37■■□□□ 1.17
LINC02449-203ENST00000536034 CHGAP10645 457 aaKnown RBP22.36■■□□□ 1.17
LINC02449-203ENST00000536034 IQGAP1P46940 1657 aa22.36■■□□□ 1.17
LINC02449-203ENST00000536034 CLTCL1P53675 1640 aa22.35■■□□□ 1.17
LINC02449-203ENST00000536034 ZFYVE9O95405 1425 aa22.35■■□□□ 1.17
LINC02449-203ENST00000536034 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.34■■□□□ 1.17
LINC02449-203ENST00000536034 RIMS2Q9UQ26 1411 aa22.33■■□□□ 1.17
LINC02449-203ENST00000536034 MYO5BQ9ULV0 1848 aa22.32■■□□□ 1.16
LINC02449-203ENST00000536034 FOXD1Q16676 465 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms