RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 MYOM3Q5VTT5 1437 aa17.02■□□□□ 0.31
CCDC60-202ENST00000535685 ZMYM3Q14202 1370 aa17.02■□□□□ 0.31
CCDC60-202ENST00000535685 ILDR1Q86SU0 546 aaPredicted RBP17.01■□□□□ 0.31
CCDC60-202ENST00000535685 MAST1Q9Y2H9 1570 aa17.01■□□□□ 0.31
CCDC60-202ENST00000535685 FAM135AQ9P2D6 1515 aa17.01■□□□□ 0.31
CCDC60-202ENST00000535685 CLTCQ00610 1675 aaKnown RBP17.01■□□□□ 0.31
CCDC60-202ENST00000535685 STRCQ7RTU9 1775 aa17■□□□□ 0.31
CCDC60-202ENST00000535685 TSPY4P0CV99 314 aa16.99■□□□□ 0.31
CCDC60-202ENST00000535685 TSPY10P0CW01 314 aa16.99■□□□□ 0.31
CCDC60-202ENST00000535685 GGT6Q6P531 493 aa16.97■□□□□ 0.31
CCDC60-202ENST00000535685 APLP2Q06481 763 aa16.96■□□□□ 0.31
CCDC60-202ENST00000535685 PTPRKQ15262 1439 aa16.96■□□□□ 0.3
CCDC60-202ENST00000535685 SLC4A2P04920 1241 aa16.95■□□□□ 0.3
CCDC60-202ENST00000535685 ZNF142P52746 1687 aaPredicted RBP16.93■□□□□ 0.3
CCDC60-202ENST00000535685 KIF3BO15066 747 aa16.92■□□□□ 0.3
CCDC60-202ENST00000535685 FBXO41Q8TF61 875 aa16.92■□□□□ 0.3
CCDC60-202ENST00000535685 PTPRTO14522 1441 aa16.92■□□□□ 0.3
CCDC60-202ENST00000535685 EIF2AK4Q9P2K8 1649 aaKnown RBP16.92■□□□□ 0.3
CCDC60-202ENST00000535685 RNF17Q9BXT8 1623 aaKnown RBP16.91■□□□□ 0.3
CCDC60-202ENST00000535685 PTPN23Q9H3S7 1636 aa16.91■□□□□ 0.3
CCDC60-202ENST00000535685 KDM5DQ9BY66 1539 aa16.91■□□□□ 0.3
CCDC60-202ENST00000535685 NCOA1Q15788 1441 aa16.9■□□□□ 0.3
CCDC60-202ENST00000535685 TCOF1Q13428 1488 aaKnown RBP16.9■□□□□ 0.3
CCDC60-202ENST00000535685 SHANK2Q9UPX8 1470 aa16.9■□□□□ 0.3
CCDC60-202ENST00000535685 MYO3AQ8NEV4 1616 aa16.89■□□□□ 0.29
CCDC60-202ENST00000535685 CROCC2H7BZ55 1655 aa16.89■□□□□ 0.29
CCDC60-202ENST00000535685 PZPP20742 1482 aa16.88■□□□□ 0.29
CCDC60-202ENST00000535685 FGD6Q6ZV73 1430 aa16.87■□□□□ 0.29
CCDC60-202ENST00000535685 ABCC5O15440 1437 aa16.87■□□□□ 0.29
CCDC60-202ENST00000535685 PLA2R1Q13018 1463 aa16.86■□□□□ 0.29
CCDC60-202ENST00000535685 DUOX2Q9NRD8 1548 aa16.86■□□□□ 0.29
CCDC60-202ENST00000535685 CEP170BQ9Y4F5 1589 aaPredicted RBP16.86■□□□□ 0.29
CCDC60-202ENST00000535685 DNMT1P26358 1616 aaKnown RBP16.86■□□□□ 0.29
CCDC60-202ENST00000535685 CAMSAP1Q5T5Y3 1602 aa16.86■□□□□ 0.29
CCDC60-202ENST00000535685 ZC3H13Q5T200 1668 aaKnown RBP16.86■□□□□ 0.29
CCDC60-202ENST00000535685 WASHC2CQ9Y4E1 1318 aa16.85■□□□□ 0.29
CCDC60-202ENST00000535685 A2ML1A8K2U0 1454 aa16.84■□□□□ 0.29
CCDC60-202ENST00000535685 DAPK1P53355 1430 aa16.83■□□□□ 0.28
CCDC60-202ENST00000535685 MROH1Q8NDA8 1641 aa16.83■□□□□ 0.28
CCDC60-202ENST00000535685 CERKQ8TCT0 537 aa16.83■□□□□ 0.28
CCDC60-202ENST00000535685 ABCC3O15438 1527 aa16.81■□□□□ 0.28
CCDC60-202ENST00000535685 ERBINQ96RT1 1412 aa16.81■□□□□ 0.28
CCDC60-202ENST00000535685 TNRQ92752 1358 aa16.81■□□□□ 0.28
CCDC60-202ENST00000535685 PKD2Q13563 968 aa16.81■□□□□ 0.28
CCDC60-202ENST00000535685 KIF15Q9NS87 1388 aa16.8■□□□□ 0.28
CCDC60-202ENST00000535685 FBXO31Q5XUX0 539 aaPredicted RBP16.79■□□□□ 0.28
CCDC60-202ENST00000535685 NLRP1Q9C000 1473 aa16.79■□□□□ 0.28
CCDC60-202ENST00000535685 PRDM15P57071 1507 aaPredicted RBP16.78■□□□□ 0.28
CCDC60-202ENST00000535685 DEPDC5O75140 1603 aa16.78■□□□□ 0.28
CCDC60-202ENST00000535685 SPATA31D1Q6ZQQ2 1576 aa16.77■□□□□ 0.28
CCDC60-202ENST00000535685 CFAP65Q6ZU64 1925 aaKnown RBP16.77■□□□□ 0.28
CCDC60-202ENST00000535685 LTBP4Q8N2S1 1624 aa16.77■□□□□ 0.27
CCDC60-202ENST00000535685 ANKRD30AQ9BXX3 1397 aa16.77■□□□□ 0.27
CCDC60-202ENST00000535685 CEP152O94986 1710 aa16.76■□□□□ 0.27
CCDC60-202ENST00000535685 ADGRL2O95490 1459 aa16.76■□□□□ 0.27
CCDC60-202ENST00000535685 ARHGAP31Q2M1Z3 1444 aa16.76■□□□□ 0.27
CCDC60-202ENST00000535685 IQSEC2Q5JU85 1478 aa16.74■□□□□ 0.27
CCDC60-202ENST00000535685 NCKAP5LQ9HCH0 1330 aa16.74■□□□□ 0.27
CCDC60-202ENST00000535685 POLR1AO95602 1720 aaPredicted RBP16.74■□□□□ 0.27
CCDC60-202ENST00000535685 MYCNP04198 464 aaPredicted RBP16.74■□□□□ 0.27
CCDC60-202ENST00000535685 RRP7BPQ9NSQ0 103 aa16.74■□□□□ 0.27
CCDC60-202ENST00000535685 ERVK-7P63135 1459 aa16.73■□□□□ 0.27
CCDC60-202ENST00000535685 VWDEQ8N2E2 1590 aa16.72■□□□□ 0.27
CCDC60-202ENST00000535685 THEMISQ8N1K5 641 aaPredicted RBP16.71■□□□□ 0.27
CCDC60-202ENST00000535685 UGGT1Q9NYU2 1555 aa16.71■□□□□ 0.27
CCDC60-202ENST00000535685 LMTK2Q8IWU2 1503 aa16.7■□□□□ 0.26
CCDC60-202ENST00000535685 NEURL4Q96JN8 1562 aa16.69■□□□□ 0.26
CCDC60-202ENST00000535685 MED14O60244 1454 aa16.68■□□□□ 0.26
CCDC60-202ENST00000535685 KANK1Q14678 1352 aa16.68■□□□□ 0.26
CCDC60-202ENST00000535685 DCAF8L1A6NGE4 600 aa16.68■□□□□ 0.26
CCDC60-202ENST00000535685 CHIC2Q9UKJ5 165 aa16.68■□□□□ 0.26
CCDC60-202ENST00000535685 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCDC60-202ENST00000535685 ANKLE2Q86XL3 938 aa16.67■□□□□ 0.26
CCDC60-202ENST00000535685 FAM50AQ14320 339 aaKnown RBP16.66■□□□□ 0.26
CCDC60-202ENST00000535685 UBR1Q8IWV7 1749 aa16.65■□□□□ 0.26
CCDC60-202ENST00000535685 ANKRD50Q9ULJ7 1429 aa16.64■□□□□ 0.25
CCDC60-202ENST00000535685 KDM5AP29375 1690 aaKnown RBP16.64■□□□□ 0.25
CCDC60-202ENST00000535685 ZNF335Q9H4Z2 1342 aaPredicted RBP16.64■□□□□ 0.25
CCDC60-202ENST00000535685 ROCK1Q13464 1354 aa16.64■□□□□ 0.25
CCDC60-202ENST00000535685 ATXN8OSP0DMR3 200 aa16.62■□□□□ 0.25
CCDC60-202ENST00000535685 EFCAB6Q5THR3 1501 aa16.61■□□□□ 0.25
CCDC60-202ENST00000535685 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.61■□□□□ 0.25
CCDC60-202ENST00000535685 NPHP4O75161 1426 aaPredicted RBP16.61■□□□□ 0.25
CCDC60-202ENST00000535685 ARHGAP23Q9P227 1491 aa16.61■□□□□ 0.25
CCDC60-202ENST00000535685 SLIT1O75093 1534 aa16.6■□□□□ 0.25
CCDC60-202ENST00000535685 IQGAP1P46940 1657 aa16.6■□□□□ 0.25
CCDC60-202ENST00000535685 NOS1P29475 1434 aa16.6■□□□□ 0.25
CCDC60-202ENST00000535685 RPRD2Q5VT52 1461 aaKnown RBP16.6■□□□□ 0.25
CCDC60-202ENST00000535685 CPS1P31327 1500 aa16.6■□□□□ 0.25
CCDC60-202ENST00000535685 UNC13BO14795 1591 aa16.58■□□□□ 0.24
CCDC60-202ENST00000535685 PIK3C2BO00750 1634 aa16.58■□□□□ 0.24
CCDC60-202ENST00000535685 TET3O43151 1660 aa16.58■□□□□ 0.24
CCDC60-202ENST00000535685 GCC2Q8IWJ2 1684 aa16.56■□□□□ 0.24
CCDC60-202ENST00000535685 SYNMO15061 1565 aa16.56■□□□□ 0.24
CCDC60-202ENST00000535685 SCAF11Q99590 1463 aaKnown RBP16.55■□□□□ 0.24
CCDC60-202ENST00000535685 SLC52A1Q9NWF4 448 aa16.55■□□□□ 0.24
CCDC60-202ENST00000535685 IDI1Q13907 227 aa16.54■□□□□ 0.24
CCDC60-202ENST00000535685 TMEM2Q9UHN6 1383 aa16.53■□□□□ 0.24
CCDC60-202ENST00000535685 RRBP1Q9P2E9 1410 aaKnown RBP16.53■□□□□ 0.24
CCDC60-202ENST00000535685 IQGAP3Q86VI3 1631 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms