RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 XIRP1Q702N8 1843 aaKnown RBP12.99□□□□□ -0.33
CPSF7-214ENST00000535222 NLRP1Q9C000 1473 aa12.98□□□□□ -0.33
CPSF7-214ENST00000535222 GGT6Q6P531 493 aa12.98□□□□□ -0.33
CPSF7-214ENST00000535222 A2MP01023 1474 aa12.97□□□□□ -0.33
CPSF7-214ENST00000535222 MIA2Q96PC5 1412 aa12.96□□□□□ -0.33
CPSF7-214ENST00000535222 UGGT1Q9NYU2 1555 aa12.96□□□□□ -0.33
CPSF7-214ENST00000535222 FOXD1Q16676 465 aa12.96□□□□□ -0.33
CPSF7-214ENST00000535222 ZRANB1Q9UGI0 708 aa12.96□□□□□ -0.33
CPSF7-214ENST00000535222 FAM135AQ9P2D6 1515 aa12.96□□□□□ -0.33
CPSF7-214ENST00000535222 PZPP20742 1482 aa12.96□□□□□ -0.34
CPSF7-214ENST00000535222 SPAG9O60271 1321 aaKnown RBP12.95□□□□□ -0.34
CPSF7-214ENST00000535222 SPATA31A6Q5VVP1 1343 aa12.95□□□□□ -0.34
CPSF7-214ENST00000535222 ROBO1Q9Y6N7 1651 aa12.95□□□□□ -0.34
CPSF7-214ENST00000535222 ZC3H13Q5T200 1668 aaKnown RBP12.94□□□□□ -0.34
CPSF7-214ENST00000535222 LRP6O75581 1613 aa12.94□□□□□ -0.34
CPSF7-214ENST00000535222 PREX2Q70Z35 1606 aa12.92□□□□□ -0.34
CPSF7-214ENST00000535222 CLIP1P30622 1438 aa12.92□□□□□ -0.34
CPSF7-214ENST00000535222 FGD6Q6ZV73 1430 aa12.92□□□□□ -0.34
CPSF7-214ENST00000535222 SETBP1Q9Y6X0 1596 aa12.92□□□□□ -0.34
CPSF7-214ENST00000535222 ATP7AQ04656 1500 aa12.92□□□□□ -0.34
CPSF7-214ENST00000535222 LRRC9Q6ZRR7 1453 aa12.91□□□□□ -0.34
CPSF7-214ENST00000535222 EP400Q96L91 3159 aa12.91□□□□□ -0.34
CPSF7-214ENST00000535222 KIAA1107Q9UPP5 1409 aa12.88□□□□□ -0.35
CPSF7-214ENST00000535222 IFFO2Q5TF58 517 aa12.88□□□□□ -0.35
CPSF7-214ENST00000535222 TMEM94Q12767 1356 aa12.88□□□□□ -0.35
CPSF7-214ENST00000535222 INO80Q9ULG1 1556 aaPredicted RBP12.88□□□□□ -0.35
CPSF7-214ENST00000535222 CSRNP3Q8WYN3 585 aa12.87□□□□□ -0.35
CPSF7-214ENST00000535222 MAP3K1Q13233 1512 aa12.87□□□□□ -0.35
CPSF7-214ENST00000535222 RBM33Q96EV2 1170 aaKnown RBP12.86□□□□□ -0.35
CPSF7-214ENST00000535222 SLAIN2Q9P270 581 aa12.86□□□□□ -0.35
CPSF7-214ENST00000535222 COL16A1Q07092 1604 aaPredicted RBP12.86□□□□□ -0.35
CPSF7-214ENST00000535222 RGS12O14924 1447 aa12.86□□□□□ -0.35
CPSF7-214ENST00000535222 PHLPP1O60346 1717 aa12.85□□□□□ -0.35
CPSF7-214ENST00000535222 HNRNPMP52272 730 aaKnown RBP eCLIP12.85□□□□□ -0.35
CPSF7-214ENST00000535222 MEX3CQ5U5Q3 659 aaKnown RBP12.85□□□□□ -0.35
CPSF7-214ENST00000535222 FMN1Q68DA7 1419 aa12.85□□□□□ -0.35
CPSF7-214ENST00000535222 LTKP29376 864 aa12.84□□□□□ -0.35
CPSF7-214ENST00000535222 RANGAP1P46060 587 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-214ENST00000535222 SCAF11Q99590 1463 aaKnown RBP12.84□□□□□ -0.35
CPSF7-214ENST00000535222 ARHGAP23Q9P227 1491 aa12.84□□□□□ -0.35
CPSF7-214ENST00000535222 DHX29Q7Z478 1369 aaKnown RBP12.83□□□□□ -0.36
CPSF7-214ENST00000535222 KCNA6P17658 529 aa12.83□□□□□ -0.36
CPSF7-214ENST00000535222 RBM6P78332 1123 aaKnown RBP12.83□□□□□ -0.36
CPSF7-214ENST00000535222 SYCP2Q9BX26 1530 aa12.83□□□□□ -0.36
CPSF7-214ENST00000535222 ADGBQ8N7X0 1667 aa12.81□□□□□ -0.36
CPSF7-214ENST00000535222 CCDC125Q86Z20 511 aa12.81□□□□□ -0.36
CPSF7-214ENST00000535222 SLIT1O75093 1534 aa12.81□□□□□ -0.36
CPSF7-214ENST00000535222 ATAD2Q6PL18 1390 aa12.81□□□□□ -0.36
CPSF7-214ENST00000535222 CDC42BPAQ5VT25 1732 aa12.8□□□□□ -0.36
CPSF7-214ENST00000535222 WASHC2CQ9Y4E1 1318 aa12.8□□□□□ -0.36
CPSF7-214ENST00000535222 RTEL1-TNFRSF6BF6WH68 1400 aa12.79□□□□□ -0.36
CPSF7-214ENST00000535222 PLEKHH2Q8IVE3 1493 aa12.79□□□□□ -0.36
CPSF7-214ENST00000535222 PRDM15P57071 1507 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-214ENST00000535222 LRP5O75197 1615 aa12.79□□□□□ -0.36
CPSF7-214ENST00000535222 AFF2P51816 1311 aa12.79□□□□□ -0.36
CPSF7-214ENST00000535222 SHPRHQ149N8 1683 aa12.79□□□□□ -0.36
CPSF7-214ENST00000535222 ABCC3O15438 1527 aa12.78□□□□□ -0.36
CPSF7-214ENST00000535222 TXNDC2Q86VQ3 553 aa12.78□□□□□ -0.36
CPSF7-214ENST00000535222 QTRT2Q9H974 415 aaKnown RBP12.78□□□□□ -0.36
CPSF7-214ENST00000535222 ATP1B4Q9UN42 357 aaPredicted RBP12.78□□□□□ -0.36
CPSF7-214ENST00000535222 NCOA2Q15596 1464 aa12.78□□□□□ -0.36
CPSF7-214ENST00000535222 GPATCH8Q9UKJ3 1502 aaKnown RBP12.78□□□□□ -0.36
CPSF7-214ENST00000535222 NUTM2BA6NNL0 878 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-214ENST00000535222 NUTM2EB1AL46 878 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-214ENST00000535222 NUTM2DQ5VT03 806 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-214ENST00000535222 PROSER2Q86WR7 435 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-214ENST00000535222 NUTM2AQ8IVF1 878 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-214ENST00000535222 ZNF777Q9ULD5 760 aaPredicted RBP12.76□□□□□ -0.37
CPSF7-214ENST00000535222 KIF3BO15066 747 aa12.75□□□□□ -0.37
CPSF7-214ENST00000535222 MSH6P52701 1360 aa12.75□□□□□ -0.37
CPSF7-214ENST00000535222 TIAM1Q13009 1591 aa12.75□□□□□ -0.37
CPSF7-214ENST00000535222 AHDC1Q5TGY3 1603 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-214ENST00000535222 UBR1Q8IWV7 1749 aa12.74□□□□□ -0.37
CPSF7-214ENST00000535222 NKTRP30414 1462 aaKnown RBP12.74□□□□□ -0.37
CPSF7-214ENST00000535222 NGLY1Q96IV0 654 aa12.74□□□□□ -0.37
CPSF7-214ENST00000535222 LRRIQ1Q96JM4 1722 aa12.73□□□□□ -0.37
CPSF7-214ENST00000535222 EID1Q9Y6B2 187 aa12.72□□□□□ -0.37
CPSF7-214ENST00000535222 TET3O43151 1660 aa12.72□□□□□ -0.37
CPSF7-214ENST00000535222 DIP2AQ14689 1571 aa12.72□□□□□ -0.37
CPSF7-214ENST00000535222 NCOA3Q9Y6Q9 1424 aa12.71□□□□□ -0.37
CPSF7-214ENST00000535222 ERVK-7P63135 1459 aa12.71□□□□□ -0.38
CPSF7-214ENST00000535222 MBD5Q9P267 1494 aa12.71□□□□□ -0.38
CPSF7-214ENST00000535222 NWD1Q149M9 1564 aa12.7□□□□□ -0.38
CPSF7-214ENST00000535222 CAMSAP2Q08AD1 1489 aa12.7□□□□□ -0.38
CPSF7-214ENST00000535222 TMEM2Q9UHN6 1383 aa12.69□□□□□ -0.38
CPSF7-214ENST00000535222 ARHGAP35Q9NRY4 1499 aa12.68□□□□□ -0.38
CPSF7-214ENST00000535222 CFDP1Q9UEE9 299 aaPredicted RBP12.68□□□□□ -0.38
CPSF7-214ENST00000535222 CCDC18Q5T9S5 1454 aa12.67□□□□□ -0.38
CPSF7-214ENST00000535222 SETD5Q9C0A6 1442 aa12.67□□□□□ -0.38
CPSF7-214ENST00000535222 NHSL1Q5SYE7 1610 aa12.66□□□□□ -0.38
CPSF7-214ENST00000535222 KDM5AP29375 1690 aaKnown RBP12.65□□□□□ -0.38
CPSF7-214ENST00000535222 YY1P25490 414 aa12.65□□□□□ -0.38
CPSF7-214ENST00000535222 EEA1Q15075 1411 aa12.63□□□□□ -0.39
CPSF7-214ENST00000535222 C8orf37Q96NL8 207 aa12.63□□□□□ -0.39
CPSF7-214ENST00000535222 SLC26A8Q96RN1 970 aa12.63□□□□□ -0.39
CPSF7-214ENST00000535222 HRCP23327 699 aa12.62□□□□□ -0.39
CPSF7-214ENST00000535222 CADPS2Q86UW7 1296 aa12.62□□□□□ -0.39
CPSF7-214ENST00000535222 CASKIN1Q8WXD9 1431 aa12.62□□□□□ -0.39
CPSF7-214ENST00000535222 BCL9LQ86UU0 1499 aa12.61□□□□□ -0.39
CPSF7-214ENST00000535222 BRINP3Q76B58 766 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms