RNA–Protein interactions for RNA: ENST00000535120.1

MRE11-205, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 2

Gene MRE11, Length 234 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-205ENST00000535120 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.6□□□□□ -0.55
MRE11-205ENST00000535120 ANKLE2Q86XL3 938 aa11.6□□□□□ -0.55
MRE11-205ENST00000535120 PHF23Q9BUL5 403 aaPredicted RBP11.59□□□□□ -0.55
MRE11-205ENST00000535120 MBD5Q9P267 1494 aa11.57□□□□□ -0.56
MRE11-205ENST00000535120 ZNF142P52746 1687 aaPredicted RBP11.57□□□□□ -0.56
MRE11-205ENST00000535120 THEMISQ8N1K5 641 aaPredicted RBP11.57□□□□□ -0.56
MRE11-205ENST00000535120 TIAM1Q13009 1591 aa11.57□□□□□ -0.56
MRE11-205ENST00000535120 DNMT1P26358 1616 aaKnown RBP11.57□□□□□ -0.56
MRE11-205ENST00000535120 TSPY4P0CV99 314 aa11.56□□□□□ -0.56
MRE11-205ENST00000535120 TSPY10P0CW01 314 aa11.56□□□□□ -0.56
MRE11-205ENST00000535120 SHANK2Q9UPX8 1470 aa11.56□□□□□ -0.56
MRE11-205ENST00000535120 ADGBQ8N7X0 1667 aa11.55□□□□□ -0.56
MRE11-205ENST00000535120 RTEL1-TNFRSF6BF6WH68 1400 aa11.55□□□□□ -0.56
MRE11-205ENST00000535120 EHBP1L1Q8N3D4 1523 aa11.55□□□□□ -0.56
MRE11-205ENST00000535120 CCDC141Q6ZP82 1450 aa11.54□□□□□ -0.56
MRE11-205ENST00000535120 CEP162Q5TB80 1403 aa11.53□□□□□ -0.56
MRE11-205ENST00000535120 MIA2Q96PC5 1412 aa11.53□□□□□ -0.56
MRE11-205ENST00000535120 PZPP20742 1482 aa11.53□□□□□ -0.56
MRE11-205ENST00000535120 CAMSAP2Q08AD1 1489 aa11.53□□□□□ -0.56
MRE11-205ENST00000535120 KDM5DQ9BY66 1539 aa11.53□□□□□ -0.56
MRE11-205ENST00000535120 NPHP4O75161 1426 aaPredicted RBP11.52□□□□□ -0.56
MRE11-205ENST00000535120 NCOA2Q15596 1464 aa11.52□□□□□ -0.56
MRE11-205ENST00000535120 CPS1P31327 1500 aa11.52□□□□□ -0.57
MRE11-205ENST00000535120 FAM135AQ9P2D6 1515 aa11.52□□□□□ -0.57
MRE11-205ENST00000535120 MED1Q15648 1581 aaPredicted RBP11.52□□□□□ -0.57
MRE11-205ENST00000535120 NEURL4Q96JN8 1562 aa11.51□□□□□ -0.57
MRE11-205ENST00000535120 RSPH4AQ5TD94 716 aa11.51□□□□□ -0.57
MRE11-205ENST00000535120 UGGT1Q9NYU2 1555 aa11.5□□□□□ -0.57
MRE11-205ENST00000535120 NLRP1Q9C000 1473 aa11.49□□□□□ -0.57
MRE11-205ENST00000535120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.48□□□□□ -0.576e-7■■■■□ 21
MRE11-205ENST00000535120 POLR1AO95602 1720 aaPredicted RBP11.48□□□□□ -0.57
MRE11-205ENST00000535120 VWDEQ8N2E2 1590 aa11.47□□□□□ -0.57
MRE11-205ENST00000535120 TXNDC2Q86VQ3 553 aa11.47□□□□□ -0.57
MRE11-205ENST00000535120 STAG3Q9UJ98 1225 aa11.46□□□□□ -0.57
MRE11-205ENST00000535120 LOC105371045A0A1W2PR82 267 aa11.45□□□□□ -0.58
MRE11-205ENST00000535120 KANK4Q5T7N3 995 aaPredicted RBP11.44□□□□□ -0.58
MRE11-205ENST00000535120 RRP7BPQ9NSQ0 103 aa11.44□□□□□ -0.58
MRE11-205ENST00000535120 ABCC3O15438 1527 aa11.44□□□□□ -0.58
MRE11-205ENST00000535120 LRRC7Q96NW7 1537 aa11.44□□□□□ -0.58
MRE11-205ENST00000535120 MED14O60244 1454 aa11.44□□□□□ -0.58
MRE11-205ENST00000535120 IQGAP1P46940 1657 aa11.43□□□□□ -0.58
MRE11-205ENST00000535120 LTKP29376 864 aa11.43□□□□□ -0.58
MRE11-205ENST00000535120 RBM33Q96EV2 1170 aaKnown RBP11.43□□□□□ -0.58
MRE11-205ENST00000535120 EID1Q9Y6B2 187 aa11.43□□□□□ -0.58
MRE11-205ENST00000535120 ERVK-7P63135 1459 aa11.43□□□□□ -0.58
MRE11-205ENST00000535120 BCANQ96GW7 911 aa11.42□□□□□ -0.58
MRE11-205ENST00000535120 DEPDC5O75140 1603 aa11.42□□□□□ -0.58
MRE11-205ENST00000535120 ARHGEF5Q12774 1597 aa11.41□□□□□ -0.58
MRE11-205ENST00000535120 SCAF11Q99590 1463 aaKnown RBP11.41□□□□□ -0.58
MRE11-205ENST00000535120 ALKQ9UM73 1620 aa11.41□□□□□ -0.58
MRE11-205ENST00000535120 LRRC9Q6ZRR7 1453 aa11.4□□□□□ -0.58
MRE11-205ENST00000535120 CHIC2Q9UKJ5 165 aa11.4□□□□□ -0.58
MRE11-205ENST00000535120 SLC26A8Q96RN1 970 aa11.39□□□□□ -0.59
MRE11-205ENST00000535120 KIF15Q9NS87 1388 aa11.39□□□□□ -0.59
MRE11-205ENST00000535120 CFAP65Q6ZU64 1925 aaKnown RBP11.39□□□□□ -0.59
MRE11-205ENST00000535120 PROSER2Q86WR7 435 aaPredicted RBP11.38□□□□□ -0.59
MRE11-205ENST00000535120 RGS17Q9UGC6 210 aaPredicted RBP11.38□□□□□ -0.59
MRE11-205ENST00000535120 STRCP1A6NGW2 1772 aa11.38□□□□□ -0.59
MRE11-205ENST00000535120 RNF17Q9BXT8 1623 aaKnown RBP11.38□□□□□ -0.59
MRE11-205ENST00000535120 VPS8Q8N3P4 1428 aa11.37□□□□□ -0.59
MRE11-205ENST00000535120 APLP2Q06481 763 aa11.37□□□□□ -0.59
MRE11-205ENST00000535120 MYOM3Q5VTT5 1437 aa11.36□□□□□ -0.59
MRE11-205ENST00000535120 CEP152O94986 1710 aa11.36□□□□□ -0.59
MRE11-205ENST00000535120 KANK1Q14678 1352 aa11.36□□□□□ -0.59
MRE11-205ENST00000535120 DUOX2Q9NRD8 1548 aa11.35□□□□□ -0.59
MRE11-205ENST00000535120 IDI1Q13907 227 aa11.35□□□□□ -0.59
MRE11-205ENST00000535120 TMEM94Q12767 1356 aa11.35□□□□□ -0.59
MRE11-205ENST00000535120 MROH1Q8NDA8 1641 aa11.35□□□□□ -0.59
MRE11-205ENST00000535120 ZC3H13Q5T200 1668 aaKnown RBP11.34□□□□□ -0.59
MRE11-205ENST00000535120 SYNMO15061 1565 aa11.34□□□□□ -0.59
MRE11-205ENST00000535120 MAST1Q9Y2H9 1570 aa11.34□□□□□ -0.59
MRE11-205ENST00000535120 TMEM2Q9UHN6 1383 aa11.34□□□□□ -0.59
MRE11-205ENST00000535120 POTEAQ6S8J7 498 aa11.34□□□□□ -0.59
MRE11-205ENST00000535120 UBR1Q8IWV7 1749 aa11.34□□□□□ -0.59
MRE11-205ENST00000535120 EIF2AK4Q9P2K8 1649 aaKnown RBP11.33□□□□□ -0.6
MRE11-205ENST00000535120 ABCC5O15440 1437 aa11.33□□□□□ -0.6
MRE11-205ENST00000535120 KCNA6P17658 529 aa11.32□□□□□ -0.6
MRE11-205ENST00000535120 ARHGAP23Q9P227 1491 aa11.32□□□□□ -0.6
MRE11-205ENST00000535120 SLIT1O75093 1534 aa11.31□□□□□ -0.6
MRE11-205ENST00000535120 PPP1R15AO75807 674 aaPredicted RBP11.31□□□□□ -0.6
MRE11-205ENST00000535120 CHGAP10645 457 aaKnown RBP11.31□□□□□ -0.6
MRE11-205ENST00000535120 C14orf37Q86TY3 774 aa11.31□□□□□ -0.6
MRE11-205ENST00000535120 ARHGAP31Q2M1Z3 1444 aa11.3□□□□□ -0.6
MRE11-205ENST00000535120 FAM135BQ49AJ0 1406 aa11.3□□□□□ -0.6
MRE11-205ENST00000535120 ERBINQ96RT1 1412 aa11.3□□□□□ -0.6
MRE11-205ENST00000535120 FAM50AQ14320 339 aaKnown RBP11.3□□□□□ -0.6
MRE11-205ENST00000535120 PIK3C2BO00750 1634 aa11.3□□□□□ -0.6
MRE11-205ENST00000535120 DAPK1P53355 1430 aa11.29□□□□□ -0.6
MRE11-205ENST00000535120 NUTM2DQ5VT03 806 aaPredicted RBP11.29□□□□□ -0.6
MRE11-205ENST00000535120 EFCAB6Q5THR3 1501 aa11.29□□□□□ -0.6
MRE11-205ENST00000535120 MSH6P52701 1360 aa11.28□□□□□ -0.6
MRE11-205ENST00000535120 ANKRD30AQ9BXX3 1397 aa11.28□□□□□ -0.6
MRE11-205ENST00000535120 MEX3CQ5U5Q3 659 aaKnown RBP11.28□□□□□ -0.6
MRE11-205ENST00000535120 SLAIN2Q9P270 581 aa11.28□□□□□ -0.6
MRE11-205ENST00000535120 PRDM15P57071 1507 aaPredicted RBP11.28□□□□□ -0.6
MRE11-205ENST00000535120 PTPN23Q9H3S7 1636 aa11.27□□□□□ -0.61
MRE11-205ENST00000535120 ROBO1Q9Y6N7 1651 aa11.25□□□□□ -0.61
MRE11-205ENST00000535120 TRIM52Q96A61 297 aa11.25□□□□□ -0.61
MRE11-205ENST00000535120 XIRP1Q702N8 1843 aaKnown RBP11.25□□□□□ -0.61
MRE11-205ENST00000535120 FGD6Q6ZV73 1430 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms