RNA–Protein interactions for RNA: ENST00000535043.1

GABRA3-204, Transcript of gamma-aminobutyric acid type A receptor alpha3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA3, Length 1,697 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3-204ENST00000535043 COL17A1Q9UMD9 1497 aaPredicted RBP9.42□□□□□ -0.9
GABRA3-204ENST00000535043 CFDP1Q9UEE9 299 aaPredicted RBP9.42□□□□□ -0.9
GABRA3-204ENST00000535043 NKX1-1Q15270 411 aaPredicted RBP9.41□□□□□ -0.9
GABRA3-204ENST00000535043 DENND4BO75064 1496 aaPredicted RBP9.4□□□□□ -0.9
GABRA3-204ENST00000535043 ADGRL1O94910 1474 aa9.4□□□□□ -0.9
GABRA3-204ENST00000535043 PLEKHH2Q8IVE3 1493 aa9.4□□□□□ -0.9
GABRA3-204ENST00000535043 GSE1Q14687 1217 aa9.4□□□□□ -0.9
GABRA3-204ENST00000535043 MIA2Q96PC5 1412 aa9.4□□□□□ -0.9
GABRA3-204ENST00000535043 SCAPERQ9BY12 1400 aa9.4□□□□□ -0.9
GABRA3-204ENST00000535043 KIAA1107Q9UPP5 1409 aa9.4□□□□□ -0.9
GABRA3-204ENST00000535043 CENPBP07199 599 aaPredicted RBP9.39□□□□□ -0.91
GABRA3-204ENST00000535043 MYOM3Q5VTT5 1437 aa9.39□□□□□ -0.91
GABRA3-204ENST00000535043 SAMD9LQ8IVG5 1584 aa9.38□□□□□ -0.91
GABRA3-204ENST00000535043 RICTORQ6R327 1708 aa9.38□□□□□ -0.91
GABRA3-204ENST00000535043 ABCC1P33527 1531 aa9.38□□□□□ -0.91
GABRA3-204ENST00000535043 RSPH4AQ5TD94 716 aa9.38□□□□□ -0.91
GABRA3-204ENST00000535043 SPDYE1Q8NFV5 336 aaPredicted RBP9.38□□□□□ -0.91
GABRA3-204ENST00000535043 AKT1S1Q96B36 256 aa9.38□□□□□ -0.91
GABRA3-204ENST00000535043 ZNF777Q9ULD5 760 aaPredicted RBP9.38□□□□□ -0.91
GABRA3-204ENST00000535043 ACIN1Q9UKV3 1341 aaKnown RBP9.38□□□□□ -0.91
GABRA3-204ENST00000535043 RAPGEF3O95398 923 aa9.37□□□□□ -0.91
GABRA3-204ENST00000535043 POGZQ7Z3K3 1410 aa9.36□□□□□ -0.91
GABRA3-204ENST00000535043 ZNF518AQ6AHZ1 1483 aa9.36□□□□□ -0.91
GABRA3-204ENST00000535043 MAGI2Q86UL8 1455 aa9.36□□□□□ -0.91
GABRA3-204ENST00000535043 FRMPD1Q5SYB0 1578 aa9.36□□□□□ -0.91
GABRA3-204ENST00000535043 ZMYM4Q5VZL5 1548 aa9.36□□□□□ -0.91
GABRA3-204ENST00000535043 ARHGEF12Q9NZN5 1544 aa9.36□□□□□ -0.91
GABRA3-204ENST00000535043 DIEXFQ68CQ4 756 aaKnown RBP9.36□□□□□ -0.91
GABRA3-204ENST00000535043 KDM5CP41229 1560 aa9.35□□□□□ -0.91
GABRA3-204ENST00000535043 TPRNQ4KMQ1 711 aa9.35□□□□□ -0.91
GABRA3-204ENST00000535043 DCAF8Q5TAQ9 597 aa9.35□□□□□ -0.91
GABRA3-204ENST00000535043 ZNF644Q9H582 1327 aaPredicted RBP9.35□□□□□ -0.91
GABRA3-204ENST00000535043 CAMSAP2Q08AD1 1489 aa9.34□□□□□ -0.91
GABRA3-204ENST00000535043 MBD5Q9P267 1494 aa9.34□□□□□ -0.91
GABRA3-204ENST00000535043 RIOK3O14730 519 aaKnown RBP9.34□□□□□ -0.91
GABRA3-204ENST00000535043 HNRNPMP52272 730 aaKnown RBP eCLIP9.34□□□□□ -0.91
GABRA3-204ENST00000535043 FGD6Q6ZV73 1430 aa9.34□□□□□ -0.91
GABRA3-204ENST00000535043 TRAPPC8Q9Y2L5 1435 aa9.34□□□□□ -0.91
GABRA3-204ENST00000535043 MLH3Q9UHC1 1453 aa9.34□□□□□ -0.91
GABRA3-204ENST00000535043 SYCP2Q9BX26 1530 aa9.34□□□□□ -0.91
GABRA3-204ENST00000535043 REM2Q8IYK8 340 aaPredicted RBP9.33□□□□□ -0.92
GABRA3-204ENST00000535043 RASEFQ8IZ41 740 aa9.33□□□□□ -0.92
GABRA3-204ENST00000535043 AFAP1Q8N556 730 aa9.33□□□□□ -0.92
GABRA3-204ENST00000535043 TCOF1Q13428 1488 aaKnown RBP9.33□□□□□ -0.92
GABRA3-204ENST00000535043 ARHGEF5Q12774 1597 aa9.33□□□□□ -0.92
GABRA3-204ENST00000535043 GTPBP6O43824 516 aaPredicted RBP9.32□□□□□ -0.92
GABRA3-204ENST00000535043 CLEC11AQ9Y240 323 aa9.32□□□□□ -0.92
GABRA3-204ENST00000535043 PTPN23Q9H3S7 1636 aa9.32□□□□□ -0.92
GABRA3-204ENST00000535043 RTEL1-TNFRSF6BF6WH68 1400 aa9.31□□□□□ -0.92
GABRA3-204ENST00000535043 RBM42Q9BTD8 480 aaKnown RBP9.31□□□□□ -0.92
GABRA3-204ENST00000535043 HECW2Q9P2P5 1572 aa9.3□□□□□ -0.92
GABRA3-204ENST00000535043 ZFYVE16Q7Z3T8 1539 aa9.3□□□□□ -0.92
GABRA3-204ENST00000535043 CCDC141Q6ZP82 1450 aa9.3□□□□□ -0.92
GABRA3-204ENST00000535043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.3□□□□□ -0.92
GABRA3-204ENST00000535043 SPAG9O60271 1321 aaKnown RBP9.3□□□□□ -0.92
GABRA3-204ENST00000535043 PRR29P0C7W0 189 aa9.3□□□□□ -0.92
GABRA3-204ENST00000535043 TSPY4P0CV99 314 aa9.3□□□□□ -0.92
GABRA3-204ENST00000535043 TSPY10P0CW01 314 aa9.3□□□□□ -0.92
GABRA3-204ENST00000535043 KIDINS220Q9ULH0 1771 aa9.3□□□□□ -0.92
GABRA3-204ENST00000535043 ARHGEF40Q8TER5 1519 aa9.29□□□□□ -0.92
GABRA3-204ENST00000535043 ATP10AO60312 1499 aa9.29□□□□□ -0.92
GABRA3-204ENST00000535043 CHRM1P11229 460 aaPredicted RBP9.29□□□□□ -0.92
GABRA3-204ENST00000535043 NEUROD1Q13562 356 aa9.29□□□□□ -0.92
GABRA3-204ENST00000535043 FAM212AQ96EL1 285 aa9.29□□□□□ -0.92
GABRA3-204ENST00000535043 YEATS2Q9ULM3 1422 aa9.28□□□□□ -0.92
GABRA3-204ENST00000535043 REREQ9P2R6 1566 aa9.28□□□□□ -0.92
GABRA3-204ENST00000535043 INO80Q9ULG1 1556 aaPredicted RBP9.28□□□□□ -0.92
GABRA3-204ENST00000535043 MAST1Q9Y2H9 1570 aa9.28□□□□□ -0.92
GABRA3-204ENST00000535043 ZNF316A6NFI3 1004 aaPredicted RBP9.28□□□□□ -0.92
GABRA3-204ENST00000535043 MYT1LQ9UL68 1186 aa9.28□□□□□ -0.92
GABRA3-204ENST00000535043 DNMT1P26358 1616 aaKnown RBP9.28□□□□□ -0.92
GABRA3-204ENST00000535043 ATP7AQ04656 1500 aa9.27□□□□□ -0.93
GABRA3-204ENST00000535043 ABCC5O15440 1437 aa9.27□□□□□ -0.93
GABRA3-204ENST00000535043 C9orf84Q5VXU9 1444 aa9.27□□□□□ -0.93
GABRA3-204ENST00000535043 RRBP1Q9P2E9 1410 aaKnown RBP9.27□□□□□ -0.93
GABRA3-204ENST00000535043 SHANK2Q9UPX8 1470 aa9.26□□□□□ -0.93
GABRA3-204ENST00000535043 DAPK1P53355 1430 aa9.26□□□□□ -0.93
GABRA3-204ENST00000535043 DIP2CQ9Y2E4 1556 aa9.26□□□□□ -0.93
GABRA3-204ENST00000535043 ABCA6Q8N139 1617 aa9.26□□□□□ -0.93
GABRA3-204ENST00000535043 VGFO15240 615 aaPredicted RBP9.26□□□□□ -0.93
GABRA3-204ENST00000535043 FAM50AQ14320 339 aaKnown RBP9.26□□□□□ -0.93
GABRA3-204ENST00000535043 CROCC2H7BZ55 1655 aa9.25□□□□□ -0.93
GABRA3-204ENST00000535043 ADGBQ8N7X0 1667 aa9.25□□□□□ -0.93
GABRA3-204ENST00000535043 STK25O00506 426 aa9.25□□□□□ -0.93
GABRA3-204ENST00000535043 SGIP1Q9BQI5 828 aa9.25□□□□□ -0.93
GABRA3-204ENST00000535043 AGLP35573 1532 aa9.25□□□□□ -0.93
GABRA3-204ENST00000535043 PITPNM1O00562 1244 aa9.24□□□□□ -0.93
GABRA3-204ENST00000535043 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.23□□□□□ -0.93
GABRA3-204ENST00000535043 ZFP91Q96JP5 570 aaPredicted RBP9.23□□□□□ -0.93
GABRA3-204ENST00000535043 GTF3C3Q9Y5Q9 886 aa9.23□□□□□ -0.93
GABRA3-204ENST00000535043 A2MP01023 1474 aa9.23□□□□□ -0.93
GABRA3-204ENST00000535043 PLXNC1O60486 1568 aa9.23□□□□□ -0.93
GABRA3-204ENST00000535043 MYT1Q01538 1121 aa9.23□□□□□ -0.93
GABRA3-204ENST00000535043 DHX29Q7Z478 1369 aaKnown RBP9.23□□□□□ -0.93
GABRA3-204ENST00000535043 ARID4BQ4LE39 1312 aaPredicted RBP9.22□□□□□ -0.93
GABRA3-204ENST00000535043 ADGRL2O95490 1459 aa9.22□□□□□ -0.93
GABRA3-204ENST00000535043 ANKRD30AQ9BXX3 1397 aa9.22□□□□□ -0.93
GABRA3-204ENST00000535043 BCORL1Q5H9F3 1711 aa9.22□□□□□ -0.93
GABRA3-204ENST00000535043 SIGLEC1Q9BZZ2 1709 aa9.22□□□□□ -0.93
GABRA3-204ENST00000535043 PYGBP11216 843 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms