RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 ANKRD50Q9ULJ7 1429 aa24.92■■□□□ 1.58
VPS51-216ENST00000534591 KIF15Q9NS87 1388 aa24.9■■□□□ 1.58
VPS51-216ENST00000534591 PLXNC1O60486 1568 aa24.89■■□□□ 1.57
VPS51-216ENST00000534591 MLECQ14165 292 aa24.88■■□□□ 1.57
VPS51-216ENST00000534591 SPAG9O60271 1321 aaKnown RBP24.85■■□□□ 1.57
VPS51-216ENST00000534591 RTEL1-TNFRSF6BF6WH68 1400 aa24.84■■□□□ 1.57
VPS51-216ENST00000534591 MPHOSPH9Q99550 1183 aa24.84■■□□□ 1.57
VPS51-216ENST00000534591 AGLP35573 1532 aa24.84■■□□□ 1.57
VPS51-216ENST00000534591 TIMELESSQ9UNS1 1208 aa24.83■■□□□ 1.57
VPS51-216ENST00000534591 DUOX2Q9NRD8 1548 aa24.79■■□□□ 1.56
VPS51-216ENST00000534591 PZPP20742 1482 aa24.77■■□□□ 1.56
VPS51-216ENST00000534591 KDM5DQ9BY66 1539 aa24.77■■□□□ 1.56
VPS51-216ENST00000534591 SIN3AQ96ST3 1273 aa24.76■■□□□ 1.55
VPS51-216ENST00000534591 A2MP01023 1474 aa24.76■■□□□ 1.55
VPS51-216ENST00000534591 SLC4A1APQ9BWU0 796 aaKnown RBP24.75■■□□□ 1.55
VPS51-216ENST00000534591 C3P01024 1663 aa24.74■■□□□ 1.55
VPS51-216ENST00000534591 PLPPR3Q6T4P5 718 aa24.74■■□□□ 1.55
VPS51-216ENST00000534591 ERBINQ96RT1 1412 aa24.74■■□□□ 1.55
VPS51-216ENST00000534591 NEUROD1Q13562 356 aa24.73■■□□□ 1.55
VPS51-216ENST00000534591 NUP155O75694 1391 aa24.71■■□□□ 1.55
VPS51-216ENST00000534591 CLTCQ00610 1675 aaKnown RBP24.69■■□□□ 1.54
VPS51-216ENST00000534591 UNC13BO14795 1591 aa24.68■■□□□ 1.54
VPS51-216ENST00000534591 ANKRD30BQ9BXX2 1392 aa24.68■■□□□ 1.54
VPS51-216ENST00000534591 LMTK3Q96Q04 1460 aa24.67■■□□□ 1.54
VPS51-216ENST00000534591 MROH2AA6NES4 1674 aa24.66■■□□□ 1.54
VPS51-216ENST00000534591 CEBPAP49715 358 aaPredicted RBP24.65■■□□□ 1.54
VPS51-216ENST00000534591 PREX1Q8TCU6 1659 aa24.64■■□□□ 1.54
VPS51-216ENST00000534591 TONSLQ96HA7 1378 aa24.64■■□□□ 1.53
VPS51-216ENST00000534591 PKD2Q13563 968 aa24.61■■□□□ 1.53
VPS51-216ENST00000534591 DHX29Q7Z478 1369 aaKnown RBP24.61■■□□□ 1.53
VPS51-216ENST00000534591 FOXD1Q16676 465 aa24.61■■□□□ 1.53
VPS51-216ENST00000534591 FAM135AQ9P2D6 1515 aa24.61■■□□□ 1.53
VPS51-216ENST00000534591 IQGAP3Q86VI3 1631 aa24.58■■□□□ 1.53
VPS51-216ENST00000534591 PPP1R15AO75807 674 aaPredicted RBP24.57■■□□□ 1.52
VPS51-216ENST00000534591 EIF2AK4Q9P2K8 1649 aaKnown RBP24.57■■□□□ 1.52
VPS51-216ENST00000534591 RPRD2Q5VT52 1461 aaKnown RBP24.56■■□□□ 1.52
VPS51-216ENST00000534591 ZNF316A6NFI3 1004 aaPredicted RBP24.56■■□□□ 1.52
VPS51-216ENST00000534591 SETD1BQ9UPS6 1966 aaKnown RBP24.56■■□□□ 1.52
VPS51-216ENST00000534591 CNTLNQ9NXG0 1405 aa24.56■■□□□ 1.52
VPS51-216ENST00000534591 GGT6Q6P531 493 aa24.56■■□□□ 1.52
VPS51-216ENST00000534591 RNF17Q9BXT8 1623 aaKnown RBP24.54■■□□□ 1.52
VPS51-216ENST00000534591 DEPDC5O75140 1603 aa24.52■■□□□ 1.52
VPS51-216ENST00000534591 MROH1Q8NDA8 1641 aa24.51■■□□□ 1.51
VPS51-216ENST00000534591 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.51■■□□□ 1.51
VPS51-216ENST00000534591 ESF1Q9H501 851 aaKnown RBP24.51■■□□□ 1.51
VPS51-216ENST00000534591 KIF3BO15066 747 aa24.51■■□□□ 1.51
VPS51-216ENST00000534591 HSPA2P54652 639 aa24.5■■□□□ 1.51
VPS51-216ENST00000534591 CEP152O94986 1710 aa24.48■■□□□ 1.51
VPS51-216ENST00000534591 ZMYM3Q14202 1370 aa24.48■■□□□ 1.51
VPS51-216ENST00000534591 KANK1Q14678 1352 aa24.46■■□□□ 1.51
VPS51-216ENST00000534591 MYO3AQ8NEV4 1616 aa24.46■■□□□ 1.51
VPS51-216ENST00000534591 VWDEQ8N2E2 1590 aa24.44■■□□□ 1.5
VPS51-216ENST00000534591 ZC3H13Q5T200 1668 aaKnown RBP24.44■■□□□ 1.5
VPS51-216ENST00000534591 UHRF1BP1Q6BDS2 1440 aa24.43■■□□□ 1.5
VPS51-216ENST00000534591 PRDM15P57071 1507 aaPredicted RBP24.43■■□□□ 1.5
VPS51-216ENST00000534591 STRCQ7RTU9 1775 aa24.42■■□□□ 1.5
VPS51-216ENST00000534591 L3MBTL2Q969R5 705 aa24.41■■□□□ 1.5
VPS51-216ENST00000534591 ZNF142P52746 1687 aaPredicted RBP24.41■■□□□ 1.5
VPS51-216ENST00000534591 NPATQ14207 1427 aa24.41■■□□□ 1.5
VPS51-216ENST00000534591 ABCC3O15438 1527 aa24.4■■□□□ 1.5
VPS51-216ENST00000534591 CFAP65Q6ZU64 1925 aaKnown RBP24.39■■□□□ 1.5
VPS51-216ENST00000534591 TET3O43151 1660 aa24.39■■□□□ 1.49
VPS51-216ENST00000534591 CAMSAP1Q5T5Y3 1602 aa24.38■■□□□ 1.49
VPS51-216ENST00000534591 PPP6R1Q9UPN7 881 aa24.38■■□□□ 1.49
VPS51-216ENST00000534591 CCDC144AA2RUR9 1427 aa24.35■■□□□ 1.49
VPS51-216ENST00000534591 PLA2R1Q13018 1463 aa24.35■■□□□ 1.49
VPS51-216ENST00000534591 WASHC2CQ9Y4E1 1318 aa24.34■■□□□ 1.49
VPS51-216ENST00000534591 LMTK2Q8IWU2 1503 aa24.34■■□□□ 1.49
VPS51-216ENST00000534591 CEP170BQ9Y4F5 1589 aaPredicted RBP24.34■■□□□ 1.49
VPS51-216ENST00000534591 E9PCH4 1651 aa24.33■■□□□ 1.49
VPS51-216ENST00000534591 FBXO31Q5XUX0 539 aaPredicted RBP24.3■■□□□ 1.48
VPS51-216ENST00000534591 PTPRTO14522 1441 aa24.29■■□□□ 1.48
VPS51-216ENST00000534591 DIEXFQ68CQ4 756 aaKnown RBP24.28■■□□□ 1.48
VPS51-216ENST00000534591 EFCAB6Q5THR3 1501 aa24.27■■□□□ 1.48
VPS51-216ENST00000534591 TRPM2O94759 1503 aa24.26■■□□□ 1.47
VPS51-216ENST00000534591 SPATA31D1Q6ZQQ2 1576 aa24.25■■□□□ 1.47
VPS51-216ENST00000534591 SPHKAPQ2M3C7 1700 aa24.25■■□□□ 1.47
VPS51-216ENST00000534591 TNRQ92752 1358 aa24.23■■□□□ 1.47
VPS51-216ENST00000534591 ERVK-7P63135 1459 aa24.22■■□□□ 1.47
VPS51-216ENST00000534591 A2ML1A8K2U0 1454 aa24.22■■□□□ 1.47
VPS51-216ENST00000534591 NBPF8Q3BBV2 869 aa24.21■■□□□ 1.47
VPS51-216ENST00000534591 POLR1AO95602 1720 aaPredicted RBP24.19■■□□□ 1.46
VPS51-216ENST00000534591 ARHGAP31Q2M1Z3 1444 aa24.15■■□□□ 1.46
VPS51-216ENST00000534591 NLRP1Q9C000 1473 aa24.15■■□□□ 1.46
VPS51-216ENST00000534591 UBR1Q8IWV7 1749 aa24.14■■□□□ 1.46
VPS51-216ENST00000534591 NEURL4Q96JN8 1562 aa24.14■■□□□ 1.46
VPS51-216ENST00000534591 CLTCL1P53675 1640 aa24.14■■□□□ 1.46
VPS51-216ENST00000534591 SPATA31E1Q6ZUB1 1445 aa24.14■■□□□ 1.45
VPS51-216ENST00000534591 DCAF11Q8TEB1 546 aa24.14■■□□□ 1.45
VPS51-216ENST00000534591 UGGT1Q9NYU2 1555 aa24.13■■□□□ 1.45
VPS51-216ENST00000534591 EIF4G2P78344 907 aaKnown RBP eCLIP24.12■■□□□ 1.45
VPS51-216ENST00000534591 SYNMO15061 1565 aa24.11■■□□□ 1.45
VPS51-216ENST00000534591 STAC3Q96MF2 364 aa24.1■■□□□ 1.45
VPS51-216ENST00000534591 NCKAP5LQ9HCH0 1330 aa24.1■■□□□ 1.45
VPS51-216ENST00000534591 RALGAPBQ86X10 1494 aa24.1■■□□□ 1.45
VPS51-216ENST00000534591 PIK3C2BO00750 1634 aa24.1■■□□□ 1.45
VPS51-216ENST00000534591 RGL3Q3MIN7 710 aa24.1■■□□□ 1.45
VPS51-216ENST00000534591 KDM2AQ9Y2K7 1162 aa24.09■■□□□ 1.45
VPS51-216ENST00000534591 HSPA5P11021 654 aaKnown RBP24.07■■□□□ 1.44
VPS51-216ENST00000534591 ZNF326Q5BKZ1 582 aaKnown RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms