RNA–Protein interactions for RNA: ENST00000534435.1

SHARPIN-210, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-210ENST00000534435 ANKLE2Q86XL3 938 aa13.8□□□□□ -0.2
SHARPIN-210ENST00000534435 ZNF644Q9H582 1327 aaPredicted RBP13.79□□□□□ -0.2
SHARPIN-210ENST00000534435 CDC42BPAQ5VT25 1732 aa13.78□□□□□ -0.2
SHARPIN-210ENST00000534435 POLR1AO95602 1720 aaPredicted RBP13.76□□□□□ -0.21
SHARPIN-210ENST00000534435 STRCP1A6NGW2 1772 aa13.76□□□□□ -0.21
SHARPIN-210ENST00000534435 CFDP1Q9UEE9 299 aaPredicted RBP13.75□□□□□ -0.21
SHARPIN-210ENST00000534435 CASKIN1Q8WXD9 1431 aa13.74□□□□□ -0.21
SHARPIN-210ENST00000534435 MED14O60244 1454 aa13.74□□□□□ -0.21
SHARPIN-210ENST00000534435 SETD1AO15047 1707 aaKnown RBP13.73□□□□□ -0.21
SHARPIN-210ENST00000534435 KIF3BO15066 747 aa13.73□□□□□ -0.21
SHARPIN-210ENST00000534435 CHIC1Q5VXU3 224 aa13.73□□□□□ -0.21
SHARPIN-210ENST00000534435 THEMISQ8N1K5 641 aaPredicted RBP13.73□□□□□ -0.21
SHARPIN-210ENST00000534435 PZPP20742 1482 aa13.73□□□□□ -0.21
SHARPIN-210ENST00000534435 MIA2Q96PC5 1412 aa13.73□□□□□ -0.21
SHARPIN-210ENST00000534435 KIAA1107Q9UPP5 1409 aa13.73□□□□□ -0.21
SHARPIN-210ENST00000534435 RNF17Q9BXT8 1623 aaKnown RBP13.72□□□□□ -0.21
SHARPIN-210ENST00000534435 CCDC18Q5T9S5 1454 aa13.72□□□□□ -0.21
SHARPIN-210ENST00000534435 UGGT1Q9NYU2 1555 aa13.71□□□□□ -0.21
SHARPIN-210ENST00000534435 DHX29Q7Z478 1369 aaKnown RBP13.7□□□□□ -0.22
SHARPIN-210ENST00000534435 CCNB3Q8WWL7 1395 aa13.7□□□□□ -0.22
SHARPIN-210ENST00000534435 FAM135AQ9P2D6 1515 aa13.69□□□□□ -0.22
SHARPIN-210ENST00000534435 WASHC2CQ9Y4E1 1318 aa13.69□□□□□ -0.22
SHARPIN-210ENST00000534435 RBM33Q96EV2 1170 aaKnown RBP13.69□□□□□ -0.22
SHARPIN-210ENST00000534435 MBD5Q9P267 1494 aa13.68□□□□□ -0.22
SHARPIN-210ENST00000534435 IQGAP1P46940 1657 aa13.68□□□□□ -0.22
SHARPIN-210ENST00000534435 KDM5DQ9BY66 1539 aa13.68□□□□□ -0.22
SHARPIN-210ENST00000534435 DEPDC5O75140 1603 aa13.68□□□□□ -0.22
SHARPIN-210ENST00000534435 PLEKHH2Q8IVE3 1493 aa13.67□□□□□ -0.22
SHARPIN-210ENST00000534435 NLRP1Q9C000 1473 aa13.67□□□□□ -0.22
SHARPIN-210ENST00000534435 SYNMO15061 1565 aa13.66□□□□□ -0.22
SHARPIN-210ENST00000534435 LTKP29376 864 aa13.65□□□□□ -0.22
SHARPIN-210ENST00000534435 ADGBQ8N7X0 1667 aa13.64□□□□□ -0.23
SHARPIN-210ENST00000534435 UPF1Q92900 1129 aaKnown RBP eCLIP13.64□□□□□ -0.23
SHARPIN-210ENST00000534435 FAM135BQ49AJ0 1406 aa13.63□□□□□ -0.23
SHARPIN-210ENST00000534435 FYCO1Q9BQS8 1478 aa13.62□□□□□ -0.23
SHARPIN-210ENST00000534435 ZC3H13Q5T200 1668 aaKnown RBP13.61□□□□□ -0.23
SHARPIN-210ENST00000534435 TRIM52Q96A61 297 aa13.61□□□□□ -0.23
SHARPIN-210ENST00000534435 RTEL1-TNFRSF6BF6WH68 1400 aa13.61□□□□□ -0.23
SHARPIN-210ENST00000534435 TMEM94Q12767 1356 aa13.6□□□□□ -0.23
SHARPIN-210ENST00000534435 TIAM1Q13009 1591 aa13.6□□□□□ -0.23
SHARPIN-210ENST00000534435 NCOA2Q15596 1464 aa13.6□□□□□ -0.23
SHARPIN-210ENST00000534435 SCAF11Q99590 1463 aaKnown RBP13.6□□□□□ -0.23
SHARPIN-210ENST00000534435 TXNDC2Q86VQ3 553 aa13.59□□□□□ -0.23
SHARPIN-210ENST00000534435 ERVK-7P63135 1459 aa13.58□□□□□ -0.24
SHARPIN-210ENST00000534435 MTUS2Q5JR59 1369 aa13.58□□□□□ -0.24
SHARPIN-210ENST00000534435 XIRP1Q702N8 1843 aaKnown RBP13.57□□□□□ -0.24
SHARPIN-210ENST00000534435 LRP6O75581 1613 aa13.57□□□□□ -0.24
SHARPIN-210ENST00000534435 ROBO1Q9Y6N7 1651 aa13.56□□□□□ -0.24
SHARPIN-210ENST00000534435 ABCC3O15438 1527 aa13.56□□□□□ -0.24
SHARPIN-210ENST00000534435 MAP3K1Q13233 1512 aa13.55□□□□□ -0.24
SHARPIN-210ENST00000534435 CCDC141Q6ZP82 1450 aa13.55□□□□□ -0.24
SHARPIN-210ENST00000534435 SLC26A8Q96RN1 970 aa13.54□□□□□ -0.24
SHARPIN-210ENST00000534435 ARHGAP23Q9P227 1491 aa13.54□□□□□ -0.24
SHARPIN-210ENST00000534435 PROSER2Q86WR7 435 aaPredicted RBP13.52□□□□□ -0.25
SHARPIN-210ENST00000534435 CAMSAP2Q08AD1 1489 aa13.52□□□□□ -0.25
SHARPIN-210ENST00000534435 SRCAPQ6ZRS2 3230 aa13.52□□□□□ -0.25
SHARPIN-210ENST00000534435 UBR1Q8IWV7 1749 aa13.51□□□□□ -0.25
SHARPIN-210ENST00000534435 JCADQ9P266 1359 aa13.51□□□□□ -0.25
SHARPIN-210ENST00000534435 SLIT1O75093 1534 aa13.5□□□□□ -0.25
SHARPIN-210ENST00000534435 KCNA6P17658 529 aa13.49□□□□□ -0.25
SHARPIN-210ENST00000534435 MEX3CQ5U5Q3 659 aaKnown RBP13.49□□□□□ -0.25
SHARPIN-210ENST00000534435 SLAIN2Q9P270 581 aa13.48□□□□□ -0.25
SHARPIN-210ENST00000534435 EID1Q9Y6B2 187 aa13.48□□□□□ -0.25
SHARPIN-210ENST00000534435 MROH1Q8NDA8 1641 aa13.48□□□□□ -0.25
SHARPIN-210ENST00000534435 TMEM2Q9UHN6 1383 aa13.47□□□□□ -0.25
SHARPIN-210ENST00000534435 CEP162Q5TB80 1403 aa13.47□□□□□ -0.25
SHARPIN-210ENST00000534435 EHBP1L1Q8N3D4 1523 aa13.45□□□□□ -0.26
SHARPIN-210ENST00000534435 PHLPP1O60346 1717 aa13.45□□□□□ -0.26
SHARPIN-210ENST00000534435 PRDM15P57071 1507 aaPredicted RBP13.44□□□□□ -0.26
SHARPIN-210ENST00000534435 LRRC9Q6ZRR7 1453 aa13.44□□□□□ -0.26
SHARPIN-210ENST00000534435 COL16A1Q07092 1604 aaPredicted RBP13.44□□□□□ -0.26
SHARPIN-210ENST00000534435 NUTM2BA6NNL0 878 aaPredicted RBP13.44□□□□□ -0.26
SHARPIN-210ENST00000534435 NUTM2EB1AL46 878 aaPredicted RBP13.44□□□□□ -0.26
SHARPIN-210ENST00000534435 RXRBP28702 533 aa13.44□□□□□ -0.26
SHARPIN-210ENST00000534435 ZNF772Q68DY9 489 aaPredicted RBP13.44□□□□□ -0.26
SHARPIN-210ENST00000534435 NUTM2AQ8IVF1 878 aaPredicted RBP13.44□□□□□ -0.26
SHARPIN-210ENST00000534435 MSH6P52701 1360 aa13.44□□□□□ -0.26
SHARPIN-210ENST00000534435 TSPY4P0CV99 314 aa13.43□□□□□ -0.26
SHARPIN-210ENST00000534435 TSPY10P0CW01 314 aa13.43□□□□□ -0.26
SHARPIN-210ENST00000534435 PIK3C2BO00750 1634 aa13.42□□□□□ -0.26
SHARPIN-210ENST00000534435 CEP152O94986 1710 aa13.42□□□□□ -0.26
SHARPIN-210ENST00000534435 STAG3Q9UJ98 1225 aa13.42□□□□□ -0.26
SHARPIN-210ENST00000534435 TET3O43151 1660 aa13.41□□□□□ -0.26
SHARPIN-210ENST00000534435 IDI1Q13907 227 aa13.41□□□□□ -0.26
SHARPIN-210ENST00000534435 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.41□□□□□ -0.26
SHARPIN-210ENST00000534435 SPATA31A6Q5VVP1 1343 aa13.4□□□□□ -0.26
SHARPIN-210ENST00000534435 RGS12O14924 1447 aa13.4□□□□□ -0.26
SHARPIN-210ENST00000534435 BCANQ96GW7 911 aa13.4□□□□□ -0.26
SHARPIN-210ENST00000534435 RSPH4AQ5TD94 716 aa13.39□□□□□ -0.27
SHARPIN-210ENST00000534435 ARHGEF5Q12774 1597 aa13.39□□□□□ -0.27
SHARPIN-210ENST00000534435 AFF2P51816 1311 aa13.39□□□□□ -0.27
SHARPIN-210ENST00000534435 NWD1Q149M9 1564 aa13.38□□□□□ -0.27
SHARPIN-210ENST00000534435 NKTRP30414 1462 aaKnown RBP13.38□□□□□ -0.27
SHARPIN-210ENST00000534435 EFCAB6Q5THR3 1501 aa13.38□□□□□ -0.27
SHARPIN-210ENST00000534435 ARHGAP31Q2M1Z3 1444 aa13.37□□□□□ -0.27
SHARPIN-210ENST00000534435 FGD6Q6ZV73 1430 aa13.37□□□□□ -0.27
SHARPIN-210ENST00000534435 NUTM2DQ5VT03 806 aaPredicted RBP13.36□□□□□ -0.27
SHARPIN-210ENST00000534435 C14orf37Q86TY3 774 aa13.35□□□□□ -0.27
SHARPIN-210ENST00000534435 CFAP65Q6ZU64 1925 aaKnown RBP13.35□□□□□ -0.27
SHARPIN-210ENST00000534435 MAST1Q9Y2H9 1570 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms