RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 FAM135AQ9P2D6 1515 aa36.65■■■■□ 3.46
SIPA1-210ENST00000534406 ANKRD50Q9ULJ7 1429 aa36.65■■■■□ 3.46
SIPA1-210ENST00000534406 ESF1Q9H501 851 aaKnown RBP36.64■■■■□ 3.46
SIPA1-210ENST00000534406 MROH1Q8NDA8 1641 aa36.63■■■■□ 3.45
SIPA1-210ENST00000534406 DEPDC5O75140 1603 aa36.62■■■■□ 3.45
SIPA1-210ENST00000534406 MROH2AA6NES4 1674 aa36.61■■■■□ 3.45
SIPA1-210ENST00000534406 CLTCQ00610 1675 aaKnown RBP36.61■■■■□ 3.45
SIPA1-210ENST00000534406 PPP6R1Q9UPN7 881 aa36.61■■■■□ 3.45
SIPA1-210ENST00000534406 KDM5DQ9BY66 1539 aa36.6■■■■□ 3.45
SIPA1-210ENST00000534406 PRDM15P57071 1507 aaPredicted RBP36.59■■■■□ 3.45
SIPA1-210ENST00000534406 GCC2Q8IWJ2 1684 aa36.59■■■■□ 3.45
SIPA1-210ENST00000534406 AEBP2Q6ZN18 517 aaPredicted RBP36.59■■■■□ 3.45
SIPA1-210ENST00000534406 ZC3H13Q5T200 1668 aaKnown RBP36.56■■■■□ 3.44
SIPA1-210ENST00000534406 C3P01024 1663 aa36.53■■■■□ 3.44
SIPA1-210ENST00000534406 HFM1A2PYH4 1435 aa36.51■■■■□ 3.44
SIPA1-210ENST00000534406 ABCC3O15438 1527 aa36.51■■■■□ 3.44
SIPA1-210ENST00000534406 NAIPQ13075 1403 aa36.51■■■■□ 3.43
SIPA1-210ENST00000534406 UNC13BO14795 1591 aa36.49■■■■□ 3.43
SIPA1-210ENST00000534406 CEP152O94986 1710 aa36.49■■■■□ 3.43
SIPA1-210ENST00000534406 WASHC2CQ9Y4E1 1318 aa36.48■■■■□ 3.43
SIPA1-210ENST00000534406 KANK1Q14678 1352 aa36.46■■■■□ 3.43
SIPA1-210ENST00000534406 PLPPR3Q6T4P5 718 aa36.44■■■■□ 3.42
SIPA1-210ENST00000534406 VWDEQ8N2E2 1590 aa36.44■■■■□ 3.42
SIPA1-210ENST00000534406 ZMYM3Q14202 1370 aa36.43■■■■□ 3.42
SIPA1-210ENST00000534406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.43■■■■□ 3.42
SIPA1-210ENST00000534406 CAMSAP1Q5T5Y3 1602 aa36.41■■■■□ 3.42
SIPA1-210ENST00000534406 CEBPAP49715 358 aaPredicted RBP36.4■■■■□ 3.42
SIPA1-210ENST00000534406 LMTK2Q8IWU2 1503 aa36.37■■■■□ 3.41
SIPA1-210ENST00000534406 PZPP20742 1482 aa36.37■■■■□ 3.41
SIPA1-210ENST00000534406 NPATQ14207 1427 aa36.34■■■■□ 3.41
SIPA1-210ENST00000534406 IQGAP3Q86VI3 1631 aa36.33■■■■□ 3.41
SIPA1-210ENST00000534406 EFCAB6Q5THR3 1501 aa36.29■■■■□ 3.4
SIPA1-210ENST00000534406 TET3O43151 1660 aa36.29■■■■□ 3.4
SIPA1-210ENST00000534406 SETD1BQ9UPS6 1966 aaKnown RBP36.28■■■■□ 3.4
SIPA1-210ENST00000534406 PREX1Q8TCU6 1659 aa36.28■■■■□ 3.4
SIPA1-210ENST00000534406 ARHGAP31Q2M1Z3 1444 aa36.27■■■■□ 3.4
SIPA1-210ENST00000534406 NUP155O75694 1391 aa36.26■■■■□ 3.39
SIPA1-210ENST00000534406 SETD5Q9C0A6 1442 aa36.23■■■■□ 3.39
SIPA1-210ENST00000534406 SPATA31D1Q6ZQQ2 1576 aa36.2■■■■□ 3.39
SIPA1-210ENST00000534406 ERVK-7P63135 1459 aa36.2■■■■□ 3.39
SIPA1-210ENST00000534406 MYO3AQ8NEV4 1616 aa36.19■■■■□ 3.38
SIPA1-210ENST00000534406 UHRF1BP1Q6BDS2 1440 aa36.19■■■■□ 3.38
SIPA1-210ENST00000534406 LMTK3Q96Q04 1460 aa36.18■■■■□ 3.38
SIPA1-210ENST00000534406 FBXO31Q5XUX0 539 aaPredicted RBP36.17■■■■□ 3.38
SIPA1-210ENST00000534406 RPRD2Q5VT52 1461 aaKnown RBP36.17■■■■□ 3.38
SIPA1-210ENST00000534406 CFAP65Q6ZU64 1925 aaKnown RBP36.16■■■■□ 3.38
SIPA1-210ENST00000534406 TNRQ92752 1358 aa36.16■■■■□ 3.38
SIPA1-210ENST00000534406 RAB3GAP2Q9H2M9 1393 aa36.13■■■■□ 3.37
SIPA1-210ENST00000534406 E9PCH4 1651 aa36.13■■■■□ 3.37
SIPA1-210ENST00000534406 TRIM52Q96A61 297 aa36.12■■■■□ 3.37
SIPA1-210ENST00000534406 ZNF142P52746 1687 aaPredicted RBP36.12■■■■□ 3.37
SIPA1-210ENST00000534406 TRIM26Q12899 539 aaPredicted RBP36.08■■■■□ 3.37
SIPA1-210ENST00000534406 ACIN1Q9UKV3 1341 aaKnown RBP36.08■■■■□ 3.37
SIPA1-210ENST00000534406 CEP170BQ9Y4F5 1589 aaPredicted RBP36.07■■■■□ 3.37
SIPA1-210ENST00000534406 NLRP1Q9C000 1473 aa36.05■■■■□ 3.36
SIPA1-210ENST00000534406 NOS1P29475 1434 aa36.04■■■■□ 3.36
SIPA1-210ENST00000534406 SYNMO15061 1565 aa36.02■■■■□ 3.36
SIPA1-210ENST00000534406 A2ML1A8K2U0 1454 aa36.02■■■■□ 3.36
SIPA1-210ENST00000534406 SLC4A1APQ9BWU0 796 aaKnown RBP35.97■■■■□ 3.35
SIPA1-210ENST00000534406 SPHKAPQ2M3C7 1700 aa35.96■■■■□ 3.35
SIPA1-210ENST00000534406 HRCP23327 699 aa35.93■■■■□ 3.34
SIPA1-210ENST00000534406 HSPA2P54652 639 aa35.93■■■■□ 3.34
SIPA1-210ENST00000534406 UGGT1Q9NYU2 1555 aa35.91■■■■□ 3.34
SIPA1-210ENST00000534406 PKD2Q13563 968 aa35.9■■■■□ 3.34
SIPA1-210ENST00000534406 PIK3C2BO00750 1634 aa35.9■■■■□ 3.34
SIPA1-210ENST00000534406 PTPRTO14522 1441 aa35.87■■■■□ 3.33
SIPA1-210ENST00000534406 UBR1Q8IWV7 1749 aa35.87■■■■□ 3.33
SIPA1-210ENST00000534406 MPHOSPH9Q99550 1183 aa35.87■■■■□ 3.33
SIPA1-210ENST00000534406 TRPM2O94759 1503 aa35.85■■■■□ 3.33
SIPA1-210ENST00000534406 SLC52A1Q9NWF4 448 aa35.85■■■■□ 3.33
SIPA1-210ENST00000534406 KDM5AP29375 1690 aaKnown RBP35.84■■■■□ 3.33
SIPA1-210ENST00000534406 ADGRB3O60242 1522 aa35.83■■■■□ 3.33
SIPA1-210ENST00000534406 PLA2R1Q13018 1463 aa35.82■■■■□ 3.32
SIPA1-210ENST00000534406 IDI1Q13907 227 aa35.8■■■■□ 3.32
SIPA1-210ENST00000534406 CLTCL1P53675 1640 aa35.76■■■■□ 3.32
SIPA1-210ENST00000534406 THEMISQ8N1K5 641 aaPredicted RBP35.76■■■■□ 3.32
SIPA1-210ENST00000534406 STRCQ7RTU9 1775 aa35.74■■■■□ 3.31
SIPA1-210ENST00000534406 FOXD1Q16676 465 aa35.74■■■■□ 3.31
SIPA1-210ENST00000534406 STAG3Q9UJ98 1225 aa35.74■■■■□ 3.31
SIPA1-210ENST00000534406 TMEM131LA2VDJ0 1609 aa35.72■■■■□ 3.31
SIPA1-210ENST00000534406 POLR1AO95602 1720 aaPredicted RBP35.71■■■■□ 3.31
SIPA1-210ENST00000534406 MYO5BQ9ULV0 1848 aa35.71■■■■□ 3.31
SIPA1-210ENST00000534406 SLIT1O75093 1534 aa35.68■■■■□ 3.3
SIPA1-210ENST00000534406 ARHGAP23Q9P227 1491 aa35.67■■■■□ 3.3
SIPA1-210ENST00000534406 KIF1BO60333 1816 aa35.65■■■■□ 3.3
SIPA1-210ENST00000534406 CHGAP10645 457 aaKnown RBP35.63■■■■□ 3.29
SIPA1-210ENST00000534406 CCDC144AA2RUR9 1427 aa35.63■■■■□ 3.29
SIPA1-210ENST00000534406 TMEM2Q9UHN6 1383 aa35.63■■■■□ 3.29
SIPA1-210ENST00000534406 NEURL4Q96JN8 1562 aa35.61■■■■□ 3.29
SIPA1-210ENST00000534406 SCAF11Q99590 1463 aaKnown RBP35.6■■■■□ 3.29
SIPA1-210ENST00000534406 NCKAP5LQ9HCH0 1330 aa35.59■■■■□ 3.29
SIPA1-210ENST00000534406 ANKLE2Q86XL3 938 aa35.59■■■■□ 3.29
SIPA1-210ENST00000534406 PCGF6Q9BYE7 350 aa35.58■■■■□ 3.29
SIPA1-210ENST00000534406 DMRT2Q9Y5R5 561 aa35.54■■■■□ 3.28
SIPA1-210ENST00000534406 ZFYVE9O95405 1425 aa35.54■■■■□ 3.28
SIPA1-210ENST00000534406 ANKRD30BQ9BXX2 1392 aa35.53■■■■□ 3.28
SIPA1-210ENST00000534406 EID1Q9Y6B2 187 aa35.53■■■■□ 3.28
SIPA1-210ENST00000534406 RIMS2Q9UQ26 1411 aa35.52■■■■□ 3.28
SIPA1-210ENST00000534406 MED14O60244 1454 aa35.52■■■■□ 3.28
SIPA1-210ENST00000534406 IQGAP1P46940 1657 aa35.51■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms