RNA–Protein interactions for RNA: ENST00000534375.1

PICALM-222, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 2

Gene PICALM, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-222	ENST00000534375	DPYSL4	O14531	572 aa		7.38	□□□□□ -1.23
PICALM-222	ENST00000534375	PPP1R15B	Q5SWA1	713 aa		7.38	□□□□□ -1.23
PICALM-222	ENST00000534375	ZNF687	Q8N1G0	1237 aa		7.38	□□□□□ -1.23
PICALM-222	ENST00000534375	ZNF316	A6NFI3	1004 aa	Predicted RBP	7.37	□□□□□ -1.23
PICALM-222	ENST00000534375	PDIA6	Q15084	440 aa		7.37	□□□□□ -1.23
PICALM-222	ENST00000534375	KHSRP	Q92945	711 aa	Known RBP eCLIP	7.36	□□□□□ -1.23	2e-8	■□□□□ 10
PICALM-222	ENST00000534375	GPHN	Q9NQX3	736 aa	Predicted RBP	7.36	□□□□□ -1.23
PICALM-222	ENST00000534375	FOXK1	P85037	733 aa		7.35	□□□□□ -1.23
PICALM-222	ENST00000534375	PCDHGA4	Q9Y5G9	962 aa		7.35	□□□□□ -1.23
PICALM-222	ENST00000534375	CCDC102A	Q96A19	550 aa		7.34	□□□□□ -1.23
PICALM-222	ENST00000534375	ONECUT3	O60422	494 aa	Predicted RBP	7.33	□□□□□ -1.24
PICALM-222	ENST00000534375	NUDT7	P0C024	238 aa		7.33	□□□□□ -1.24
PICALM-222	ENST00000534375	PARP9	Q8IXQ6	854 aa		7.33	□□□□□ -1.24
PICALM-222	ENST00000534375	PLPP6	Q8IY26	295 aa		7.33	□□□□□ -1.24
PICALM-222	ENST00000534375	APBB1	O00213	710 aa		7.32	□□□□□ -1.24
PICALM-222	ENST00000534375	RANGAP1	P46060	587 aa	Predicted RBP	7.32	□□□□□ -1.24
PICALM-222	ENST00000534375	DSG2	Q14126	1118 aa		7.32	□□□□□ -1.24
PICALM-222	ENST00000534375	RNF166	Q96A37	237 aa	Predicted RBP	7.32	□□□□□ -1.24
PICALM-222	ENST00000534375	SPDYE16	A6NNV3	312 aa	Predicted RBP	7.31	□□□□□ -1.24
PICALM-222	ENST00000534375	AMHR2	Q16671	573 aa		7.31	□□□□□ -1.24
PICALM-222	ENST00000534375	PTCD2	Q8WV60	388 aa	Known RBP	7.31	□□□□□ -1.24
PICALM-222	ENST00000534375	MINK1	Q8N4C8	1332 aa	Predicted RBP	7.3	□□□□□ -1.24
PICALM-222	ENST00000534375	TBC1D12	O60347	775 aa		7.3	□□□□□ -1.24
PICALM-222	ENST00000534375	MAP2K5	Q13163	448 aa		7.3	□□□□□ -1.24
PICALM-222	ENST00000534375	DDRGK1	Q96HY6	314 aa		7.3	□□□□□ -1.24
PICALM-222	ENST00000534375	LHX6	Q9UPM6	363 aa		7.3	□□□□□ -1.24
PICALM-222	ENST00000534375	FECH	P22830	423 aa		7.29	□□□□□ -1.24
PICALM-222	ENST00000534375	PSD	A5PKW4	1024 aa	Predicted RBP	7.28	□□□□□ -1.24
PICALM-222	ENST00000534375	IRF6	O14896	467 aa		7.28	□□□□□ -1.24
PICALM-222	ENST00000534375	CLUAP1	Q96AJ1	413 aa		7.28	□□□□□ -1.24
PICALM-222	ENST00000534375	PBX2	P40425	430 aa		7.27	□□□□□ -1.25
PICALM-222	ENST00000534375	NPM2	Q86SE8	214 aa	Known RBP	7.27	□□□□□ -1.25
PICALM-222	ENST00000534375	PTGER2	P43116	358 aa		7.26	□□□□□ -1.25
PICALM-222	ENST00000534375	FLII	Q13045	1269 aa		7.26	□□□□□ -1.25
PICALM-222	ENST00000534375	CCDC82	Q8N4S0	544 aa		7.26	□□□□□ -1.25
PICALM-222	ENST00000534375	KDM4F	A0A1W2PPD8	638 aa		7.25	□□□□□ -1.25
PICALM-222	ENST00000534375	NUTM2F	A1L443	756 aa		7.25	□□□□□ -1.25
PICALM-222	ENST00000534375	NECTIN2	Q92692	538 aa		7.25	□□□□□ -1.25
PICALM-222	ENST00000534375	GRXCR2	A6NFK2	248 aa		7.24	□□□□□ -1.25
PICALM-222	ENST00000534375	LSM11	P83369	360 aa	Known RBP eCLIP	7.24	□□□□□ -1.25
PICALM-222	ENST00000534375	ANKRD13D	Q6ZTN6	518 aa		7.24	□□□□□ -1.25
PICALM-222	ENST00000534375		A6NJR5	290 aa		7.23	□□□□□ -1.25
PICALM-222	ENST00000534375	GNPAT	O15228	680 aa		7.23	□□□□□ -1.25
PICALM-222	ENST00000534375	MS4A1	P11836	297 aa		7.23	□□□□□ -1.25
PICALM-222	ENST00000534375	OSBP	P22059	807 aa		7.23	□□□□□ -1.25
PICALM-222	ENST00000534375	PRIM1	P49642	420 aa	Known RBP	7.23	□□□□□ -1.25
PICALM-222	ENST00000534375	REPIN1	Q9BWE0	567 aa	Known RBP	7.23	□□□□□ -1.25
PICALM-222	ENST00000534375	GOPC	Q9HD26	462 aa		7.23	□□□□□ -1.25
PICALM-222	ENST00000534375	MYT1L	Q9UL68	1186 aa		7.23	□□□□□ -1.25
PICALM-222	ENST00000534375	TRAK2	O60296	914 aa		7.22	□□□□□ -1.25
PICALM-222	ENST00000534375	OXER1	Q8TDS5	423 aa		7.22	□□□□□ -1.25
PICALM-222	ENST00000534375	ARHGAP33	O14559	1287 aa		7.21	□□□□□ -1.26
PICALM-222	ENST00000534375	MCM6	Q14566	821 aa		7.21	□□□□□ -1.26
PICALM-222	ENST00000534375	GIGYF2	Q6Y7W6	1299 aa	Known RBP	7.21	□□□□□ -1.26
PICALM-222	ENST00000534375	TTLL12	Q14166	644 aa	Predicted RBP	7.2	□□□□□ -1.26
PICALM-222	ENST00000534375	HIC1	Q14526	733 aa		7.2	□□□□□ -1.26
PICALM-222	ENST00000534375	PPP4R3B	Q5MIZ7	849 aa		7.2	□□□□□ -1.26
PICALM-222	ENST00000534375	POTEE	Q6S8J3	1075 aa		7.2	□□□□□ -1.26
PICALM-222	ENST00000534375	UPF1	Q92900	1129 aa	Known RBP eCLIP	7.2	□□□□□ -1.26
PICALM-222	ENST00000534375	AXIN2	Q9Y2T1	843 aa		7.2	□□□□□ -1.26
PICALM-222	ENST00000534375	PDIA4	P13667	645 aa	Known RBP	7.19	□□□□□ -1.26
PICALM-222	ENST00000534375	FCHSD2	O94868	740 aa		7.17	□□□□□ -1.26
PICALM-222	ENST00000534375	MAP3K9	P80192	1104 aa		7.16	□□□□□ -1.26
PICALM-222	ENST00000534375	PTGDR	Q13258	359 aa		7.16	□□□□□ -1.26
PICALM-222	ENST00000534375	DDX12P	Q92771	950 aa		7.16	□□□□□ -1.26
PICALM-222	ENST00000534375	KCNH8	Q96L42	1107 aa		7.16	□□□□□ -1.26
PICALM-222	ENST00000534375	PCMTD1	Q96MG8	357 aa	Predicted RBP	7.16	□□□□□ -1.26
PICALM-222	ENST00000534375	ZBTB7C	A1YPR0	619 aa		7.15	□□□□□ -1.26
PICALM-222	ENST00000534375	TK2	O00142	265 aa		7.15	□□□□□ -1.26
PICALM-222	ENST00000534375	POM121	Q96HA1	1249 aa		7.15	□□□□□ -1.26
PICALM-222	ENST00000534375	TMUB1	Q9BVT8	246 aa		7.15	□□□□□ -1.26
PICALM-222	ENST00000534375	ANO8	Q9HCE9	1232 aa	Predicted RBP	7.15	□□□□□ -1.26
PICALM-222	ENST00000534375	SH3D19	Q5HYK7	790 aa		7.14	□□□□□ -1.27
PICALM-222	ENST00000534375	ADGRD1	Q6QNK2	874 aa		7.14	□□□□□ -1.27
PICALM-222	ENST00000534375	FNBP4	Q8N3X1	1017 aa	Predicted RBP	7.14	□□□□□ -1.27
PICALM-222	ENST00000534375	EVI5	O60447	810 aa		7.13	□□□□□ -1.27
PICALM-222	ENST00000534375	PSEN2	P49810	448 aa		7.13	□□□□□ -1.27
PICALM-222	ENST00000534375	PROSER2	Q86WR7	435 aa	Predicted RBP	7.13	□□□□□ -1.27
PICALM-222	ENST00000534375	ZNF454	Q8N9F8	522 aa		7.13	□□□□□ -1.27
PICALM-222	ENST00000534375	ZNF777	Q9ULD5	760 aa	Predicted RBP	7.13	□□□□□ -1.27
PICALM-222	ENST00000534375	DMRTA1	Q5VZB9	504 aa		7.12	□□□□□ -1.27
PICALM-222	ENST00000534375	PHOX2B	Q99453	314 aa		7.12	□□□□□ -1.27
PICALM-222	ENST00000534375	CCDC9	Q9Y3X0	531 aa	Known RBP	7.12	□□□□□ -1.27
PICALM-222	ENST00000534375	FOSB	P53539	338 aa		7.11	□□□□□ -1.27
PICALM-222	ENST00000534375	BCL2L12	Q9HB09	334 aa		7.11	□□□□□ -1.27
PICALM-222	ENST00000534375	CDHR5	Q9HBB8	845 aa		7.11	□□□□□ -1.27
PICALM-222	ENST00000534375	PROCA1	Q8NCQ7	364 aa	Predicted RBP	7.1	□□□□□ -1.27
PICALM-222	ENST00000534375	STAC3	Q96MF2	364 aa		7.1	□□□□□ -1.27
PICALM-222	ENST00000534375	KCNK17	Q96T54	332 aa		7.1	□□□□□ -1.27
PICALM-222	ENST00000534375	HR	O43593	1189 aa		7.09	□□□□□ -1.27
PICALM-222	ENST00000534375	PTPRE	P23469	700 aa		7.09	□□□□□ -1.27
PICALM-222	ENST00000534375	JPH4	Q96JJ6	628 aa		7.09	□□□□□ -1.27
PICALM-222	ENST00000534375	MDM2	Q00987	491 aa	Predicted RBP	7.08	□□□□□ -1.28
PICALM-222	ENST00000534375	SKIV2L	Q15477	1246 aa	Known RBP	7.08	□□□□□ -1.28
PICALM-222	ENST00000534375	ZDHHC16	Q969W1	377 aa		7.08	□□□□□ -1.28
PICALM-222	ENST00000534375	TRAIP	Q9BWF2	469 aa		7.08	□□□□□ -1.28
PICALM-222	ENST00000534375	NPDC1	Q9NQX5	325 aa	Predicted RBP	7.08	□□□□□ -1.28
PICALM-222	ENST00000534375	SLC4A5	Q9BY07	1137 aa		7.07	□□□□□ -1.28
PICALM-222	ENST00000534375	FBXO31	Q5XUX0	539 aa	Predicted RBP	7.06	□□□□□ -1.28
PICALM-222	ENST00000534375	KCTD17	Q8N5Z5	321 aa		7.06	□□□□□ -1.28

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