RNA–Protein interactions for RNA: ENST00000534336.1

MALAT1-202, metastasis associated lung adenocarcinoma transcript 1, humanhuman

BASIC

Gene MALAT1, Length 8,708 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-202ENST00000534336 ERLIN2O94905 339 aa11.33□□□□□ -0.6
MALAT1-202ENST00000534336 MIER1Q8N108 512 aa11.33□□□□□ -0.6
MALAT1-202ENST00000534336 SLKQ9H2G2 1235 aaPredicted RBP11.32□□□□□ -0.6
MALAT1-202ENST00000534336 FEZ1Q99689 392 aa11.32□□□□□ -0.6
MALAT1-202ENST00000534336 PMFBP1Q8TBY8 1022 aa11.31□□□□□ -0.6
MALAT1-202ENST00000534336 DEF6Q9H4E7 631 aa11.31□□□□□ -0.6
MALAT1-202ENST00000534336 LRRFIP1Q32MZ4 808 aaKnown RBP11.3□□□□□ -0.6
MALAT1-202ENST00000534336 FAM184AQ8NB25 1140 aa11.3□□□□□ -0.6
MALAT1-202ENST00000534336 NF2P35240 595 aa11.3□□□□□ -0.6
MALAT1-202ENST00000534336 CCDC43Q96MW1 224 aaKnown RBP11.3□□□□□ -0.6
MALAT1-202ENST00000534336 TSPYL1Q9H0U9 437 aa11.3□□□□□ -0.6
MALAT1-202ENST00000534336 FAM13BQ9NYF5 915 aa11.3□□□□□ -0.6
MALAT1-202ENST00000534336 MNS1Q8NEH6 495 aa11.3□□□□□ -0.6
MALAT1-202ENST00000534336 CFAP57Q96MR6 1250 aa11.3□□□□□ -0.6
MALAT1-202ENST00000534336 RWDD1Q9H446 243 aaPredicted RBP11.3□□□□□ -0.6
MALAT1-202ENST00000534336 U2SURPO15042 1029 aaKnown RBP11.3□□□□□ -0.6
MALAT1-202ENST00000534336 GBP2P32456 591 aaPredicted RBP11.3□□□□□ -0.6
MALAT1-202ENST00000534336 SPATA24Q86W54 205 aa11.3□□□□□ -0.6
MALAT1-202ENST00000534336 DIAPH3Q9NSV4 1193 aa11.3□□□□□ -0.6
MALAT1-202ENST00000534336 MYH10P35580 1976 aa11.3□□□□□ -0.6
MALAT1-202ENST00000534336 B4GALNT3Q6L9W6 998 aa11.29□□□□□ -0.6
MALAT1-202ENST00000534336 GIMAP7Q8NHV1 300 aa11.29□□□□□ -0.6
MALAT1-202ENST00000534336 CFAP65Q6ZU64 1925 aaKnown RBP11.29□□□□□ -0.6
MALAT1-202ENST00000534336 ENOX2Q16206 610 aaKnown RBP11.29□□□□□ -0.6
MALAT1-202ENST00000534336 AMOTL1Q8IY63 956 aa11.29□□□□□ -0.6
MALAT1-202ENST00000534336 PRKCSHP14314 528 aaPredicted RBP11.29□□□□□ -0.6
MALAT1-202ENST00000534336 PPM1EQ8WY54 764 aa11.29□□□□□ -0.6
MALAT1-202ENST00000534336 CCAR1Q8IX12 1150 aaKnown RBP11.29□□□□□ -0.6
MALAT1-202ENST00000534336 MTUS2Q5JR59 1369 aa11.28□□□□□ -0.6
MALAT1-202ENST00000534336 RALBP1Q15311 655 aa11.28□□□□□ -0.6
MALAT1-202ENST00000534336 NAT10Q9H0A0 1025 aaKnown RBP11.28□□□□□ -0.6
MALAT1-202ENST00000534336 R3HCC1Q9Y3T6 440 aaKnown RBP11.28□□□□□ -0.6
MALAT1-202ENST00000534336 TRIM29Q14134 588 aa11.27□□□□□ -0.6
MALAT1-202ENST00000534336 TRIM34Q9BYJ4 488 aa11.27□□□□□ -0.61
MALAT1-202ENST00000534336 POGKQ9P215 609 aa11.27□□□□□ -0.61
MALAT1-202ENST00000534336 CTDP1Q9Y5B0 961 aaPredicted RBP11.27□□□□□ -0.61
MALAT1-202ENST00000534336 ZFYVE27Q5T4F4 411 aa11.27□□□□□ -0.61
MALAT1-202ENST00000534336 HMGB1P1B2RPK0 211 aaPredicted RBP11.27□□□□□ -0.61
MALAT1-202ENST00000534336 CCP110O43303 1012 aa11.27□□□□□ -0.61
MALAT1-202ENST00000534336 CHMP3Q9Y3E7 222 aa11.27□□□□□ -0.61
MALAT1-202ENST00000534336 SPAG9O60271 1321 aaKnown RBP11.26□□□□□ -0.61
MALAT1-202ENST00000534336 HMGN5P82970 282 aaKnown RBP11.26□□□□□ -0.61
MALAT1-202ENST00000534336 RABEP1Q15276 862 aa11.26□□□□□ -0.61
MALAT1-202ENST00000534336 SSR1P43307 286 aaKnown RBP11.26□□□□□ -0.61
MALAT1-202ENST00000534336 SYNE3Q6ZMZ3 975 aa11.26□□□□□ -0.61
MALAT1-202ENST00000534336 WWC2Q6AWC2 1192 aa11.25□□□□□ -0.61
MALAT1-202ENST00000534336 CC2D1BQ5T0F9 858 aaKnown RBP11.25□□□□□ -0.61
MALAT1-202ENST00000534336 CT47B1P0C2W7 299 aaPredicted RBP11.24□□□□□ -0.61
MALAT1-202ENST00000534336 IPO9Q96P70 1041 aaKnown RBP11.24□□□□□ -0.61
MALAT1-202ENST00000534336 CCDC9Q9Y3X0 531 aaKnown RBP11.24□□□□□ -0.61
MALAT1-202ENST00000534336 KIF3BO15066 747 aa11.24□□□□□ -0.61
MALAT1-202ENST00000534336 CHIC2Q9UKJ5 165 aa11.24□□□□□ -0.61
MALAT1-202ENST00000534336 RBM19Q9Y4C8 960 aaKnown RBP11.24□□□□□ -0.61
MALAT1-202ENST00000534336 PAF1Q8N7H5 531 aa11.23□□□□□ -0.61
MALAT1-202ENST00000534336 RSF1Q96T23 1441 aaPredicted RBP11.23□□□□□ -0.61
MALAT1-202ENST00000534336 EIF3JO75822 258 aaKnown RBP11.23□□□□□ -0.61
MALAT1-202ENST00000534336 APBB1O00213 710 aa11.23□□□□□ -0.61
MALAT1-202ENST00000534336 ITPRIPQ8IWB1 547 aa11.23□□□□□ -0.61
MALAT1-202ENST00000534336 CPLX2Q6PUV4 134 aaKnown RBP11.23□□□□□ -0.61
MALAT1-202ENST00000534336 AXDND1Q5T1B0 1012 aaPredicted RBP11.23□□□□□ -0.61
MALAT1-202ENST00000534336 SLC26A8Q96RN1 970 aa11.23□□□□□ -0.61
MALAT1-202ENST00000534336 FRAT2O75474 233 aaPredicted RBP11.22□□□□□ -0.61
MALAT1-202ENST00000534336 STAMBPO95630 424 aa11.22□□□□□ -0.61
MALAT1-202ENST00000534336 CEP63Q96MT8 703 aa11.22□□□□□ -0.61
MALAT1-202ENST00000534336 CCDC175P0C221 793 aa11.22□□□□□ -0.61
MALAT1-202ENST00000534336 NOL10Q9BSC4 688 aaKnown RBP11.22□□□□□ -0.61
MALAT1-202ENST00000534336 IFT57Q9NWB7 429 aa11.22□□□□□ -0.61
MALAT1-202ENST00000534336 ANKRD62A6NC57 917 aa11.22□□□□□ -0.61
MALAT1-202ENST00000534336 MFAP1P55081 439 aaKnown RBP11.22□□□□□ -0.61
MALAT1-202ENST00000534336 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.22□□□□□ -0.61
MALAT1-202ENST00000534336 TXLNBQ8N3L3 684 aa11.22□□□□□ -0.61
MALAT1-202ENST00000534336 DDX49Q9Y6V7 483 aaKnown RBP11.21□□□□□ -0.61
MALAT1-202ENST00000534336 SASS6Q6UVJ0 657 aa11.21□□□□□ -0.61
MALAT1-202ENST00000534336 FAM43AQ8N2R8 423 aa11.21□□□□□ -0.61
MALAT1-202ENST00000534336 OFD1O75665 1012 aa11.21□□□□□ -0.61
MALAT1-202ENST00000534336 CCDC91Q7Z6B0 441 aa11.21□□□□□ -0.61
MALAT1-202ENST00000534336 DDX23Q9BUQ8 820 aaKnown RBP11.21□□□□□ -0.61
MALAT1-202ENST00000534336 MCTP1Q6DN14 999 aa11.21□□□□□ -0.62
MALAT1-202ENST00000534336 CARD11Q9BXL7 1154 aa11.21□□□□□ -0.62
MALAT1-202ENST00000534336 CHMP5Q9NZZ3 219 aa11.21□□□□□ -0.62
MALAT1-202ENST00000534336 SETSIPP0DME0 302 aa11.2□□□□□ -0.62
MALAT1-202ENST00000534336 GSE1Q14687 1217 aa11.2□□□□□ -0.62
MALAT1-202ENST00000534336 EIF3AQ14152 1382 aaKnown RBP11.2□□□□□ -0.62
MALAT1-202ENST00000534336 DDX11Q96FC9 970 aa11.2□□□□□ -0.62
MALAT1-202ENST00000534336 TOMM22Q9NS69 142 aa11.2□□□□□ -0.62
MALAT1-202ENST00000534336 OLFM4Q6UX06 510 aa11.2□□□□□ -0.62
MALAT1-202ENST00000534336 SMARCE1Q969G3 411 aa11.2□□□□□ -0.62
MALAT1-202ENST00000534336 LUC7LQ9NQ29 371 aaKnown RBP11.2□□□□□ -0.62
MALAT1-202ENST00000534336 SYCP1Q15431 976 aa11.2□□□□□ -0.62
MALAT1-202ENST00000534336 IQCEQ6IPM2 695 aa11.19□□□□□ -0.62
MALAT1-202ENST00000534336 CLGNO14967 610 aa11.19□□□□□ -0.62
MALAT1-202ENST00000534336 PAIP2Q9BPZ3 127 aaKnown RBP11.19□□□□□ -0.62
MALAT1-202ENST00000534336 DHX8Q14562 1220 aaKnown RBP11.19□□□□□ -0.62
MALAT1-202ENST00000534336 CCDC97Q96F63 343 aaPredicted RBP11.18□□□□□ -0.62
MALAT1-202ENST00000534336 STK31Q9BXU1 1019 aa11.18□□□□□ -0.62
MALAT1-202ENST00000534336 TIMELESSQ9UNS1 1208 aa11.18□□□□□ -0.62
MALAT1-202ENST00000534336 CGNL1Q0VF96 1302 aa11.18□□□□□ -0.62
MALAT1-202ENST00000534336 CCDC112Q8NEF3 446 aa11.18□□□□□ -0.62
MALAT1-202ENST00000534336 CWC22Q9HCG8 908 aaKnown RBP11.18□□□□□ -0.62
MALAT1-202ENST00000534336 HIRIP3Q9BW71 556 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms